EY756735

Overview
NameEY756735
Unique NameEY756735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length286
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1066 contig Csv1_Contig1066:535..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.008e-29
Identity = 60/90 (66.67%), Postives = 68/90 (75.56%), Query Frame = 2
Query:   17 KHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            K HE+K+KD+KTLLFGE PV VFG RNPEEIPW + GA++VVESTGVFT               V+ISAPSKDAPMFVVGVNEHEYK +L
Sbjct:   57 KSHEIKLKDEKTLLFGETPVAVFGCRNPEEIPWGQAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSDL 146          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PC_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 1 OS=Zea mays GN=GAPC1 PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 6.008e-29
Identity = 59/91 (64.84%), Postives = 68/91 (74.73%), Query Frame = 2
Query:   14 WKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            WKH ++ +KD KTLLFG+KPVTVFG+RNPEEIPW E GAEYVVESTGVFT               V+ISAPSKDAPMFVVGVNE +Y  ++
Sbjct:   56 WKHSDITLKDSKTLLFGDKPVTVFGIRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEDKYTSDV 146          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PC_PETCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petroselinum crispum GN=GAPC PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.338e-28
Identity = 61/92 (66.30%), Postives = 68/92 (73.91%), Query Frame = 2
Query:   11 EWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            +WK  ELKVKD KTLLFG+KP+TVFGVRNPEE PW E GAEYVVESTGVFT               V+ISAPS +APMFVVGVNE EYK ++
Sbjct:   54 QWKKDELKVKDSKTLLFGDKPLTVFGVRNPEEDPWGEAGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSGNAPMFVVGVNEKEYKKDI 145          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PC_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Gracilaria verrucosa GN=GAPC PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.937e-19
Identity = 48/86 (55.81%), Postives = 59/86 (68.60%), Query Frame = 2
Query:   29 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            ++ KD K ++ G K +T++G R+P EIPWAE GA+YVVESTGVFT               VIISAPSKDAPMFV GVNE +Y P+L
Sbjct:   60 VETKDGKLIVNG-KSITIYGHRDPAEIPWAEAGADYVVESTGVFTLKEKAEKHFTGGAKKVIISAPSKDAPMFVCGVNEDKYTPDL 144          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PC_PHYPA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Physcomitrella patens GN=GAPC PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.530e-19
Identity = 45/91 (49.45%), Postives = 58/91 (63.74%), Query Frame = 2
Query:   11 EWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 283
            +WK  E+ +  +  L FG  PV V+  R+P EIPW + GA++VVESTGVFT               V+ISAPSKDAPMFV+GVNE++Y  E
Sbjct:   58 QWKKTEVTLHSEGHLTFGGNPVAVYACRDPSEIPWGKHGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVMGVNENKYSDE 148          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.139e-18
Identity = 46/86 (53.49%), Postives = 56/86 (65.12%), Query Frame = 2
Query:   26 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 283
            +++ KD K ++ G KP++VFG R+P  IPW + GA+YVVESTGVFT               VIISAPS DAPMFV GVN   YKPE
Sbjct:   58 KVETKDGKLVIEG-KPISVFGERDPAAIPWGKAGADYVVESTGVFTTIEKASLHLKGGAKKVIISAPSADAPMFVCGVNLEAYKPE 142          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_DEBHA (Glyceraldehyde-3-phosphate dehydrogenase OS=Debaryomyces hansenii GN=GPD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 8.998e-17
Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 2
Query:   26 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            E+  KDD  ++ G+  + VFG ++P  IPW + G +YV+ESTGVFT               VII+APS DAPMFVVGVNE +Y P+L
Sbjct:   58 EVTSKDDSLVIDGQS-IKVFGEKDPASIPWGKAGVDYVIESTGVFTTTEGAQKHIDGGAKKVIITAPSSDAPMFVVGVNEQKYTPDL 143          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_ERYGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Erysiphe graminis subsp. hordei GN=GPD PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.175e-16
Identity = 43/78 (55.13%), Postives = 49/78 (62.82%), Query Frame = 2
Query:   53 LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            L+   + V  +  RNPEEIPWAETGAEY+VESTGVFT               VIISAPS DAPMFV+GVN   Y  +L
Sbjct:   67 LVVNSRNVKFYNKRNPEEIPWAETGAEYIVESTGVFTTTEKAKAHLKGGAKKVIISAPSADAPMFVMGVNHKSYTTDL 144          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PC_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chondrus crispus GN=GAPC PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.175e-16
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 2
Query:   26 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            ++ +KD K  + G   +TVF  R+P EIPWA   A+Y+VE+TGVFT               V+ISAPSKDAPMFV GVNE +Y P+L
Sbjct:   59 DVSIKDGKLQVDGNS-ITVFAHRDPAEIPWATAAADYIVEATGVFTLKDKAAAHFKGGAKKVVISAPSKDAPMFVCGVNEAKYTPDL 144          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_YARLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrowia lipolytica GN=GPD PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.618e-16
Identity = 43/81 (53.09%), Postives = 50/81 (61.73%), Query Frame = 2
Query:   44 DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            D  L+   K + VFG R+P  IPW + GA+YVVESTGVFT               VIISAPS DAPMFVVGVN   YKP++
Sbjct:   63 DGGLIIDGKHIQVFGERDPSNIPWGKAGADYVVESTGVFTGKEAASAHLKGGAKKVIISAPSGDAPMFVVGVNLDAYKPDM 143          
The following BLAST results are available for this feature:
BLAST of EY756735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
G3PC_MESCR6.008e-2966.67Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MAIZE6.008e-2964.84Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PETCR1.338e-2866.30Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_GRAVE1.937e-1955.81Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PHYPA2.530e-1949.45Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_CRYCU8.139e-1853.49Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P_DEBHA8.998e-1748.28Glyceraldehyde-3-phosphate dehydrogenase OS=Debary... [more]
G3P_ERYGR1.175e-1655.13Glyceraldehyde-3-phosphate dehydrogenase OS=Erysip... [more]
G3PC_CHOCR1.175e-1649.43Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_YARLI2.618e-1653.09Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrow... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-B01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756735 ID=EY756735; Name=EY756735; organism=Citrus sinensis; type=EST; length=286bp
CCACGCGTCCGAATGGAAGCACCATGAATTGAAGGTTAAGGACGATAAGA
CCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCA
GAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGAGTCGAC
TGGAGTCTTTACAGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTG
CTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGTT
GTGGGTGTCAATGAGCACGAGTACAAACCAGAGCTC
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