EY756735

Overview
NameEY756735
Unique NameEY756735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length286
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1066 contig Csv1_Contig1066:535..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P1_GLORO (Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragment) OS=Globodera rostochiensis GN=GPD-1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.100e-14
Identity = 37/69 (53.62%), Postives = 46/69 (66.67%), Query Frame = 2
Query:   74 VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 280
            + VF +++P EI WAE GAEYV+ESTGVFT               V+ISAPS DAPM+V+GVNE +Y P
Sbjct:   79 IKVFNLKDPAEIKWAEVGAEYVIESTGVFTTIEKASAHLKGGAKKVVISAPSADAPMYVMGVNEDKYDP 147          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_LYOSH (Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophyllum shimeji GN=GPD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 41/85 (48.24%), Postives = 51/85 (60.00%), Query Frame = 2
Query:   29 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 283
            ++ KD K  + G KPV V+G +NP +I W   G +YVVESTGVFT               VIISAPS DAPMFV+G N  +Y P+
Sbjct:   58 VEAKDGKLWIQG-KPVIVYGEKNPSDIKWGAAGRDYVVESTGVFTTVEKAEGHLKGGAKKVIISAPSADAPMFVMGCNLDQYDPK 141          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_COCP7 (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides posadasii (strain C735) GN=GPD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 2
Query:   68 KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            K V  +  R+P  IPWAETGA+YV+ESTGVFT               VIISAPS DAPMFV+GVN   YK ++
Sbjct:   71 KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYKSDI 143          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 2
Query:   68 KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            K V  +  R+P  IPWAETGA+YV+ESTGVFT               VIISAPS DAPMFV+GVN   YK ++
Sbjct:   71 KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYKSDI 143          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_ASPOR (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus oryzae GN=gpdA PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 39/81 (48.15%), Postives = 47/81 (58.02%), Query Frame = 2
Query:   44 DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            D+ L+   K +  F  R+P  IPW   GA Y+VESTGVFT               VIISAPS DAPMFV+GVN  EYK ++
Sbjct:   64 DEGLIVNGKKIRFFAERDPAAIPWGSAGAAYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNKEYKTDI 144          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P2_DROSU (Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragment) OS=Drosophila subobscura GN=Gapdh2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 40/78 (51.28%), Postives = 47/78 (60.26%), Query Frame = 2
Query:   53 LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            L+   + +TVF  R+P  I WA  GAEYVVESTGVFT               V+ISAPS DAPMFV GVN   YKP++
Sbjct:   54 LVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIEKASTHLKGGAKKVVISAPSADAPMFVCGVNLDAYKPDM 131          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P2_DROPS (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila pseudoobscura pseudoobscura GN=Gapdh2 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 40/78 (51.28%), Postives = 47/78 (60.26%), Query Frame = 2
Query:   53 LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            L+   + +TVF  R+P  I WA  GAEYVVESTGVFT               V+ISAPS DAPMFV GVN   YKP++
Sbjct:   64 LVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIEKASTHLKGGAKKVVISAPSADAPMFVCGVNLDAYKPDM 141          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P2_DROME (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila melanogaster GN=Gapdh2 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 40/78 (51.28%), Postives = 47/78 (60.26%), Query Frame = 2
Query:   53 LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            L+   + +TVF  R+P  I WA  GAEY+VESTGVFT               VIISAPS DAPMFV GVN   YKP++
Sbjct:   64 LVVNGQKITVFSERDPANINWASAGAEYIVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCGVNLDAYKPDM 141          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P1_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schizosaccharomyces pombe GN=tdh1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = 2
Query:   29 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 280
            +++KD K ++ G   + V   R+P +I W+ +GA+YV+ESTGVFT               VIISAPSKDAPM+VVGVNE ++ P
Sbjct:   60 VEIKDGKLVIDGNA-IDVHNERDPADIKWSTSGADYVIESTGVFTTQETASAHLKGGAKRVIISAPSKDAPMYVVGVNEEKFNP 142          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_COCHE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cochliobolus heterostrophus GN=GPD1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.876e-14
Identity = 41/87 (47.13%), Postives = 51/87 (58.62%), Query Frame = 2
Query:   26 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            ++KV D   L    K +     ++P  IPW+ETGA YVVESTGVFT               V+ISAPS DAPMFV+GVN   YKP++
Sbjct:   58 DIKV-DGNNLTVNGKTIRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSPDAPMFVMGVNHETYKPDI 143          
The following BLAST results are available for this feature:
BLAST of EY756735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
G3P1_GLORO1.100e-1453.62Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragme... [more]
G3P_LYOSH1.437e-1448.24Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophy... [more]
G3P_COCP71.437e-1453.42Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_COCIM1.437e-1453.42Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_ASPOR1.437e-1448.15Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P2_DROSU1.437e-1451.28Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragme... [more]
G3P2_DROPS1.437e-1451.28Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Dros... [more]
G3P2_DROME1.437e-1451.28Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Dros... [more]
G3P1_SCHPO1.437e-1446.43Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schi... [more]
G3P_COCHE1.876e-1447.13Glyceraldehyde-3-phosphate dehydrogenase OS=Cochli... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-B01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756735 ID=EY756735; Name=EY756735; organism=Citrus sinensis; type=EST; length=286bp
CCACGCGTCCGAATGGAAGCACCATGAATTGAAGGTTAAGGACGATAAGA
CCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCA
GAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGAGTCGAC
TGGAGTCTTTACAGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTG
CTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGTT
GTGGGTGTCAATGAGCACGAGTACAAACCAGAGCTC
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