EY756735

Overview
NameEY756735
Unique NameEY756735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length286
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1066 contig Csv1_Contig1066:535..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_USTMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ustilago maydis GN=GAPD PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.200e-14
Identity = 39/86 (45.35%), Postives = 50/86 (58.14%), Query Frame = 2
Query:   26 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 283
            ++  KD K ++ G K + VF  ++P  IPW + GA YVVESTGVFT               V+ISAPS DAPM+V GVN   Y P+
Sbjct:   59 DISTKDGKLIVNG-KSIAVFAEKDPSNIPWGQAGAHYVVESTGVFTTIDKASAHIKGGAKKVVISAPSADAPMYVCGVNLDAYDPK 143          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_GLOMM (Glyceraldehyde-3-phosphate dehydrogenase OS=Glossina morsitans morsitans GN=Gapdh PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.200e-14
Identity = 40/82 (48.78%), Postives = 47/82 (57.32%), Query Frame = 2
Query:   41 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            D   L+   K +TVF  R+P  I WA  GAEY+VESTGVFT               V+ISAPS DAPMFV GVN   Y P++
Sbjct:   60 DGGFLVVNGKKITVFCERDPTNINWASAGAEYIVESTGVFTTIDKASAHFKGGAKKVVISAPSADAPMFVCGVNLEAYSPDM 141          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_COLLN (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum lindemuthianum GN=GPDA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.200e-14
Identity = 40/79 (50.63%), Postives = 47/79 (59.49%), Query Frame = 2
Query:   38 KDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 274
            +D   L+   K V  +  R+P  IPW ETGA+YVVESTGVFT               VIISAPS DAPM+V+GVNE  Y
Sbjct:   62 QDGNDLVINGKKVKFYTERDPAVIPWKETGADYVVESTGVFTTIDKAKAHLQGGAKKVIISAPSADAPMYVMGVNEKSY 140          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Bos taurus GN=GAPDH PE=1 SV=4)

HSP 1 Score: 77.0258 bits (188), Expect = 3.200e-14
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 2
Query:   29 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPMFV+GVN  +Y   L
Sbjct:   58 VKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYNNTL 142          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_PIG (Glyceraldehyde-3-phosphate dehydrogenase OS=Sus scrofa GN=GAPDH PE=1 SV=4)

HSP 1 Score: 76.6406 bits (187), Expect = 4.180e-14
Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = 2
Query:   20 HHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            H  +K ++ K ++ G K +T+F  R+P  I W + GA YVVESTGVFT               VIISAPS DAPMFV+GVN  +Y   L
Sbjct:   55 HGTVKAENGKLVING-KAITIFQERDPANIKWGDAGATYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSL 142          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_PHACH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phanerochaete chrysosporium GN=GPD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.180e-14
Identity = 41/82 (50.00%), Postives = 48/82 (58.54%), Query Frame = 2
Query:   29 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 274
            ++ KD K  + G KP+ VF  ++P  IPW   GAEY+VESTGVFT               VIISAPS DAPMFV GVN   Y
Sbjct:   59 VEAKDGKLYVEG-KPIHVFAEKDPANIPWGSVGAEYIVESTGVFTTTEKASAHLKGVCKKVIISAPSADAPMFVCGVNLDAY 139          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_ONCMY (Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorhynchus mykiss GN=gapdh PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.180e-14
Identity = 38/85 (44.71%), Postives = 52/85 (61.18%), Query Frame = 2
Query:   26 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 280
            E+ ++D K L+  +  ++VF    P EIPW + GA+YVVESTGVF                V++SAPS DAPMFV+GVNE ++ P
Sbjct:   58 EVSMEDGK-LIVDDHSISVFQCMKPHEIPWGKAGADYVVESTGVFLSIDKASSHIQGGAKRVVVSAPSPDAPMFVMGVNEDKFDP 141          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_MESAU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mesocricetus auratus GN=GAPDH PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.180e-14
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 2
Query:   29 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPMFV+GVN  +Y   L
Sbjct:   48 VKAENGKLVING-KAITIFQERDPTNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHDKYDNSL 132          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_LACDT (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Lactarius deterrimus GN=GPD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.180e-14
Identity = 41/82 (50.00%), Postives = 50/82 (60.98%), Query Frame = 2
Query:   29 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 274
            +++KD K ++ G  P+TVF  R+P  I W   GA+YVVES+GVFT               VIISAPS DAPMFVVGVN   Y
Sbjct:   38 VEIKDGKLVIDGH-PITVFQERDPANIQWGSVGADYVVESSGVFTTVDKASAHLKGGAKKVIISAPSADAPMFVVGVNLDAY 118          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P1_DROME (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Drosophila melanogaster GN=Gapdh1 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 4.180e-14
Identity = 40/78 (51.28%), Postives = 46/78 (58.97%), Query Frame = 2
Query:   53 LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            L+   + +TVF  R+P  I WA  GAEYVVESTGVFT               VIISAPS DAPMFV GVN   Y P++
Sbjct:   64 LVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCGVNLDAYSPDM 141          
The following BLAST results are available for this feature:
BLAST of EY756735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
G3P_USTMA3.200e-1445.35Glyceraldehyde-3-phosphate dehydrogenase OS=Ustila... [more]
G3P_GLOMM3.200e-1448.78Glyceraldehyde-3-phosphate dehydrogenase OS=Glossi... [more]
G3P_COLLN3.200e-1450.63Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_BOVIN3.200e-1447.67Glyceraldehyde-3-phosphate dehydrogenase OS=Bos ta... [more]
G3P_PIG4.180e-1446.07Glyceraldehyde-3-phosphate dehydrogenase OS=Sus sc... [more]
G3P_PHACH4.180e-1450.00Glyceraldehyde-3-phosphate dehydrogenase OS=Phaner... [more]
G3P_ONCMY4.180e-1444.71Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorh... [more]
G3P_MESAU4.180e-1447.67Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_LACDT4.180e-1450.00Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P1_DROME4.180e-1451.28Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Dros... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-B01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756735 ID=EY756735; Name=EY756735; organism=Citrus sinensis; type=EST; length=286bp
CCACGCGTCCGAATGGAAGCACCATGAATTGAAGGTTAAGGACGATAAGA
CCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCA
GAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGAGTCGAC
TGGAGTCTTTACAGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTG
CTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGTT
GTGGGTGTCAATGAGCACGAGTACAAACCAGAGCTC
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