EY756733

Overview
NameEY756733
Unique NameEY756733
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6139 contig Csv1_Contig6139:733..1347. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756733 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.668e-22
Identity = 51/122 (41.80%), Postives = 72/122 (59.02%), Query Frame = 1
Query:   16 DIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 381
            D   +++ NYYPPCP P+  LG   H D +ALT+L+ ++V GL+V  D  W     +P A+VI+IGD    LSNG+YK+ LHR  V++ + R S   FL P  D VV P P     ++ P +
Sbjct:  224 DSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHYPDF 345          
BLAST of EY756733 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.668e-22
Identity = 49/129 (37.98%), Postives = 80/129 (62.02%), Query Frame = 1
Query:   40 NYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFL-------EPPADTVVGPLPQLVDDENPPKYKAKKFKDY 405
            +YYP CP+P+L  G   H+D   LT+L+ +++ GLQ+  +++WID  +IP ALVI+I D +++++N K+K+V HR   +K   R+S  V         E  +  + GP+ +L+ +ENPP YK    KD+
Sbjct:  251 HYYPACPQPELTFGTSKHSDSGFLTILMQDQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDF 379          
BLAST of EY756733 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.668e-22
Identity = 47/126 (37.30%), Postives = 77/126 (61.11%), Query Frame = 1
Query:   40 NYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEP---PADTVVGPLPQLVDDENPPKYKAKKFKDYS 408
            +YYPPCP+PDL LG+  H+D S LT+L+ + + GLQV  D  W+D   +P ALV+++GD +++++N K+ +V HR   +    R+S   F          V GP+ +++ +ENPP Y+     +Y+
Sbjct:  221 HYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYA 346          
BLAST of EY756733 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.178e-22
Identity = 52/133 (39.10%), Postives = 81/133 (60.90%), Query Frame = 1
Query:   13 DDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSY 411
            ++ + ++++N+YPPC  PDL LG   H D S+LT+L  + V GLQVF D++W   +  P A V++IGD    LSNG +K+ LHR  V+++  R S   FL P  D VV P   +++     K K +K+ D+++
Sbjct:  219 EENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKPPSDILE-----KMKTRKYPDFTW 346          
BLAST of EY756733 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.412e-21
Identity = 50/123 (40.65%), Postives = 75/123 (60.98%), Query Frame = 1
Query:   13 DDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 381
            ++ + ++++NYYPPC +PDL LG   H D ++LT+L  + V GLQVF +++W   +  P A V++IGD    LSN +YK+ LHR  V+ +  R S   FL P  D VV P  +L+D     +Y
Sbjct:  221 EENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELLDSITSRRY 343          
BLAST of EY756733 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.412e-21
Identity = 52/139 (37.41%), Postives = 81/139 (58.27%), Query Frame = 1
Query:   13 DDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQV----FKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCK 417
            D I+  L++N YP CP P LA+G+  HTD S LT+L    +PGL++     +  RWI  + I  +LV+ +GD   I+SNG++++ +HR  V+K   R+S   F  PP +  +GPL    D  +PP Y+   +++Y   K
Sbjct:  200 DSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGNIPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVNKTHHRVSAAYFAGPPKNLQIGPLTS--DKNHPPIYRRLIWEEYLAAK 336          
BLAST of EY756733 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.365e-21
Identity = 52/111 (46.85%), Postives = 73/111 (65.77%), Query Frame = 1
Query:   76 LGVVAHTDLSALTVLVP-NEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 405
            LG+  H+D + LT+L+  NEV GL + KD++W+  K I  A V++IGD IEI+SNG YK++ HR  ++ DK R+S   F +P   T +GPLP LV  EN  KYK   ++DY
Sbjct:  223 LGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAFHDPEYGTKIGPLPDLV-KENGVKYKTIDYEDY 332          
BLAST of EY756733 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.151e-21
Identity = 47/125 (37.60%), Postives = 77/125 (61.60%), Query Frame = 1
Query:   34 KINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 405
            K++ YP CP+P++  G+ AHTD   + +L  ++ V GLQ+ KD  WID   + +++VI++GDQ+E+++NG+YK+++HR    K+  RMS   F  P +D  + P   L   E   +Y +  F DY
Sbjct:  161 KVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAEISPASSLACKET--EYPSFVFDDY 283          
BLAST of EY756733 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.195e-20
Identity = 50/118 (42.37%), Postives = 71/118 (60.17%), Query Frame = 1
Query:   28 MLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 381
            ++++NYYP C RP   LG   H D ++LT+L  + V GL+V+ + RW   +  P ALV+++GD    LSN +Y++ LHR  V+    R S   FL P  DTVV P  +LVDD +P  Y
Sbjct:  213 IMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQDHVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELVDDHHPRVY 330          
BLAST of EY756733 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.195e-20
Identity = 52/118 (44.07%), Postives = 68/118 (57.63%), Query Frame = 1
Query:   28 MLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 381
            ++++NYYPPC RP   LG   H D ++LT+L  + V GLQV  + RW   +   +A V++IGD    LSNG+YK+ LHR  V+    R S   FL P  D VV P   LVD  NP  Y
Sbjct:  203 IMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAY 320          
The following BLAST results are available for this feature:
BLAST of EY756733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GAOX2_ORYSI1.668e-2241.80Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
DV4H_CATRO1.668e-2237.98Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCH1_ARATH1.668e-2237.301-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GAOX2_ARATH2.178e-2239.10Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
GAOX1_ARATH1.412e-2140.65Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
G3OX3_ARATH1.412e-2137.41Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
NCS1_COPJA5.365e-2146.85S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
ACCO1_BRAJU9.151e-2137.601-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
GAOX1_ORYSJ1.195e-2042.37Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
GAO1B_WHEAT1.195e-2044.07Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-A11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756733 ID=EY756733; Name=EY756733; organism=Citrus sinensis; type=EST; length=616bp
CCACGCGTCCGAGACGACATTGAGTACATGCTCAAGATTAATTATTATCC
GCCATGCCCACGTCCTGATCTTGCTCTTGGAGTGGTGGCCCACACTGATC
TTTCTGCCCTCACCGTTCTTGTTCCCAATGAAGTTCCTGGTCTGCAAGTC
TTTAAGGACGACCGTTGGATCGATGCCAAGTACATCCCCAACGCTCTCGT
CATCCACATCGGGGACCAGATCGAGATTCTGAGCAATGGCAAGTACAAAG
CTGTGCTGCATAGAACCACTGTTAGCAAGGACAAGACGAGAATGTCGTGG
CCAGTTTTCTTGGAGCCACCTGCGGATACGGTGGTGGGTCCCCTTCCTCA
GCTGGTTGACGATGAAAATCCTCCAAAGTACAAGGCCAAGAAGTTCAAGG
ATTACAGTTACTGTAAACTTAACAAACTTCCTCAGTAGATTTTTCATTAT
GAGAAAAATAACACCAGTATCCGCTGGCCGCTCATGTTTTATCTCGTCAC
TGTACGTTTATCGATTCTTGTTTGTTGTTGCGATCTTGTTTCTGAAATGT
AATCGCGGGTATTAGCAATAATAAATAATCCTTTATTTTGAAAAAAAAAA
AAAAAAAAAAAAAAAA
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