EY756716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756716 vs. ExPASy Swiss-Prot
Match: RS12_SULAC (30S ribosomal protein S12P OS=Sulfolobus acidocaldarius GN=rps12p PE=3 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 1.103e-14 Identity = 38/62 (61.29%), Postives = 51/62 (82.26%), Query Frame = 2 Query: 14 IAAFVPNDGCLNYIEENDEVLIAGFGRK-GHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 196 + AFVP DG +N+I+E+DEV+IAG G G ++GD+PGVR+KVV V+GVSL AL+K KK+KP Sbjct: 84 VTAFVPGDGGVNFIDEHDEVVIAGIGGTLGRSMGDLPGVRYKVVMVNGVSLDALYKGKKQKP 145
BLAST of EY756716 vs. ExPASy Swiss-Prot
Match: RS12_SULTO (30S ribosomal protein S12P OS=Sulfolobus tokodaii GN=rps12p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.441e-14 Identity = 37/62 (59.68%), Postives = 51/62 (82.26%), Query Frame = 2 Query: 14 IAAFVPNDGCLNYIEENDEVLIAGFGRK-GHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 196 + AFVP DG +N+I+E+DEV+IAG G G ++GD+PGVR+KV+ V+GVSL AL+K KK+KP Sbjct: 84 VTAFVPGDGGVNFIDEHDEVVIAGIGGTLGRSMGDLPGVRYKVIMVNGVSLDALYKGKKQKP 145
BLAST of EY756716 vs. ExPASy Swiss-Prot
Match: RS12_PYRIL (30S ribosomal protein S12P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps12p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.441e-14 Identity = 38/62 (61.29%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 14 IAAFVPNDGCLNYIEENDEVLIAGFGR-KGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 196 + AFVP DG LNYI E+DEV+I G +G ++GDIPGVRFKV+KV+GVSL A+++ KK+KP Sbjct: 84 VTAFVPLDGSLNYINEHDEVIIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWRGKKQKP 145
BLAST of EY756716 vs. ExPASy Swiss-Prot
Match: RS12_PYRCJ (30S ribosomal protein S12P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps12p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.882e-14 Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 14 IAAFVPNDGCLNYIEENDEVLIAGFGR-KGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 196 + AFVP DG LNYI E+DEV+I G +G ++GDIPGVRFKVVKV+GVSL A+++ KK+KP Sbjct: 84 VTAFVPYDGGLNYINEHDEVIIERIGGPEGKSLGDIPGVRFKVVKVNGVSLWAIWRGKKQKP 145
BLAST of EY756716 vs. ExPASy Swiss-Prot
Match: RS12_PYRAE (30S ribosomal protein S12P OS=Pyrobaculum aerophilum GN=rps12p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.882e-14 Identity = 38/62 (61.29%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 14 IAAFVPNDGCLNYIEENDEVLIAGFGR-KGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 196 + AFVP DG LNYI E+DEV+I G +G ++GDIPGVRFKV+KV+GVSL A+++ KK+KP Sbjct: 84 VTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWRGKKQKP 145
BLAST of EY756716 vs. ExPASy Swiss-Prot
Match: RS12_STAMF (30S ribosomal protein S12P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps12p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.458e-14 Identity = 37/62 (59.68%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 14 IAAFVPNDGCLNYIEENDEVLIAGFGR-KGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 196 + AFVP DG +NYI+E+DEV+I G G +G ++GDIPGVR+KV+ V+GVSL AL+ KK+KP Sbjct: 84 VTAFVPFDGGINYIDEHDEVIIEGIGGPRGRSMGDIPGVRYKVIMVNGVSLKALYLGKKQKP 145
BLAST of EY756716 vs. ExPASy Swiss-Prot
Match: RS12_THECE (30S ribosomal protein S12P OS=Thermococcus celer GN=rps12p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.210e-14 Identity = 37/63 (58.73%), Postives = 49/63 (77.78%), Query Frame = 2 Query: 14 IAAFVPNDGCLNYIEENDEVLIAGFGR-KGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 199 + AF P DG +N+I+E+DEV+I G G KG ++GDIPG+R+KVVKV+ VSL L K +KEKPR Sbjct: 84 VTAFTPGDGAINHIDEHDEVIIEGIGGPKGGSMGDIPGIRYKVVKVNRVSLKELVKGRKEKPR 146
BLAST of EY756716 vs. ExPASy Swiss-Prot
Match: RS12_SULSO (30S ribosomal protein S12P OS=Sulfolobus solfataricus GN=rps12p PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 3.210e-14 Identity = 36/62 (58.06%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 14 IAAFVPNDGCLNYIEENDEVLIAGFGRK-GHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 196 + AFVP DG +N+I+E+DEV+I G G G ++GD+PGVR+KV+ V+GVSL AL+K KK+KP Sbjct: 84 VTAFVPGDGGVNFIDEHDEVIITGIGGTLGRSMGDLPGVRYKVIMVNGVSLDALYKGKKQKP 145
BLAST of EY756716 vs. ExPASy Swiss-Prot
Match: RS12_PYRKO (30S ribosomal protein S12P OS=Pyrococcus kodakaraensis GN=rps12p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.210e-14 Identity = 37/63 (58.73%), Postives = 49/63 (77.78%), Query Frame = 2 Query: 14 IAAFVPNDGCLNYIEENDEVLIAGFGR-KGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 199 + AF P DG +N+I+E+DEV+I G G KG ++GDIPG+R+KVVKV+ VSL L K +KEKPR Sbjct: 84 VTAFTPGDGAINHIDEHDEVIIEGIGGPKGGSMGDIPGIRYKVVKVNRVSLKELVKGRKEKPR 146
BLAST of EY756716 vs. ExPASy Swiss-Prot
Match: RS12_PYRHO (30S ribosomal protein S12P OS=Pyrococcus horikoshii GN=rps12p PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 3.210e-14 Identity = 37/63 (58.73%), Postives = 49/63 (77.78%), Query Frame = 2 Query: 14 IAAFVPNDGCLNYIEENDEVLIAGFGR-KGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 199 + AF P DG +N+I+E+DEV+I G G KG ++GDIPG+R+KVVKV+ VSL L K +KEKPR Sbjct: 84 VTAFCPGDGAINFIDEHDEVIIEGIGGPKGGSMGDIPGIRYKVVKVNRVSLKELVKGRKEKPR 146 The following BLAST results are available for this feature:
BLAST of EY756716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756716 ID=EY756716; Name=EY756716; organism=Citrus sinensis; type=EST; length=398bpback to top |