EY756714

Overview
NameEY756714
Unique NameEY756714
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9540 contig Csv1_Contig9540:523..1046. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756714 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 6.839e-63
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 2
Query:   11 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 367
            GNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADD EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  146 GNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264          
BLAST of EY756714 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 1.524e-62
Identity = 110/119 (92.44%), Postives = 118/119 (99.16%), Query Frame = 2
Query:   11 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 367
            G+P LIHAQSILAIWACQV+LMGA+EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct:  160 GSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278          
BLAST of EY756714 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 1.524e-62
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 2
Query:   11 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 367
            GNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA PVNNNAWAYATNFVPGK
Sbjct:  145 GNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263          
BLAST of EY756714 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 1.524e-62
Identity = 113/119 (94.96%), Postives = 117/119 (98.32%), Query Frame = 2
Query:   11 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 367
            GNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:  151 GNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269          
BLAST of EY756714 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 2.599e-62
Identity = 112/119 (94.12%), Postives = 117/119 (98.32%), Query Frame = 2
Query:   11 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 367
            GNPSL+HAQSILAIWACQVVLMGAVEGYR+AG PLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQA+VTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:  148 GNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266          
BLAST of EY756714 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 3.394e-62
Identity = 112/119 (94.12%), Postives = 117/119 (98.32%), Query Frame = 2
Query:   11 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 367
            GNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHL+DPVNNNAW+YATNFVPGK
Sbjct:  150 GNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268          
BLAST of EY756714 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 3.394e-62
Identity = 113/119 (94.96%), Postives = 115/119 (96.64%), Query Frame = 2
Query:   11 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 367
            GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAF ELKVKE+K GRLAM SMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPGK
Sbjct:  147 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265          
BLAST of EY756714 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 7.562e-62
Identity = 108/119 (90.76%), Postives = 118/119 (99.16%), Query Frame = 2
Query:   11 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 367
            G+P LIHAQSILAIWACQV+LMGA+EGYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFA++KVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct:  160 GSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278          
BLAST of EY756714 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.685e-61
Identity = 113/119 (94.96%), Postives = 116/119 (97.48%), Query Frame = 2
Query:   11 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 367
            GN SLIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPL LADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA+PVNNNAWAYATNFVPGK
Sbjct:  127 GNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVPGK 245          
BLAST of EY756714 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 2.200e-61
Identity = 112/116 (96.55%), Postives = 115/116 (99.14%), Query Frame = 2
Query:   20 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 367
            SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:    1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 116          
The following BLAST results are available for this feature:
BLAST of EY756714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
CB22_HORVU6.839e-6395.80Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB2A_PINSY1.524e-6292.44Chlorophyll a-b binding protein type 2 member 1A, ... [more]
CB23_SOYBN1.524e-6295.80Chlorophyll a-b binding protein 3, chloroplastic O... [more]
CB22_PEA1.524e-6294.96Chlorophyll a-b binding protein AB80, chloroplasti... [more]
CB25_NICPL2.599e-6294.12Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB28_PEA3.394e-6294.12Chlorophyll a-b binding protein 8, chloroplastic O... [more]
CB22_MAIZE3.394e-6294.96Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB2A_PYRPY7.562e-6290.76Chlorophyll a-b binding protein 1A, chloroplastic ... [more]
CB21_SOYBN1.685e-6194.96Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB2D_SOLLC2.200e-6196.55Chlorophyll a-b binding protein 1D (Fragment) OS=S... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-H01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756714 ID=EY756714; Name=EY756714; organism=Citrus sinensis; type=EST; length=524bp
CCACGCGTCCGGGAACCCAAGTCTGATCCACGCTCAGAGCATCTTGGCCA
TCTGGGCTTGCCAGGTGGTCTTGATGGGAGCCGTTGAGGGTTACAGAATT
GCTGGAGGGCCGCTCGGTGAAGTGACTGACCCATTGTACCCAGGTGGCAG
CTTTGATCCATTGGGTTTGGCTGATGACCCGGAGGCTTTTGCTGAGCTCA
AGGTTAAGGAAATCAAGAATGGAAGGTTGGCTATGTTCTCCATGTTTGGT
TTCTTCGTTCAGGCCATTGTCACCGGCAAGGGACCGTTAGAGAACTTGGC
CGACCACTTGGCTGACCCTGTCAATAACAATGCCTGGGCCTACGCCACCA
ACTTTGTCCCCGGAAAGTGAGCTTCGGTTGATAAGAGTTTTTCTCTTTTC
GGTTTCTTGGATATCATGTAAATCTGTTGTGAGCTCATGGAAGCTTTAAT
TTGAGTTGTGATTATTTATAAAATGCTTCAATTTGATCTAAAAAAAAAAA
AAAAAAAAAAAAAANANNNNNNNN
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