EY756710
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756710 vs. ExPASy Swiss-Prot
Match: RS4Y2_HUMAN (40S ribosomal protein S4, Y isoform 2 OS=Homo sapiens GN=RPS4Y2 PE=1 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 7.767e-22 Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 3 Query: 3 TRPVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKR 239 T V MV G N GRVG+I NRE+H GS + +H++DA G+ FATR+ N+F IG G KPW+SLP+GKGI+L+I EE KR Sbjct: 177 TGNVCMVIAGANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 255
BLAST of EY756710 vs. ExPASy Swiss-Prot
Match: RS4_YARLI (40S ribosomal protein S4 OS=Yarrowia lipolytica GN=RPS4 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.730e-21 Identity = 48/76 (63.16%), Postives = 59/76 (77.63%), Query Frame = 3 Query: 12 VVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKR 239 +VM TGGRN GRVG I +RE+H+G F+ +HI+DAL ++F TRL NVF IG+G K +SLPKGKGIKLSI EE R Sbjct: 180 IVMTTGGRNMGRVGTITHRERHEGGFDIVHIKDALDNQFVTRLTNVFVIGEGNKSLISLPKGKGIKLSIAEERDAR 255
BLAST of EY756710 vs. ExPASy Swiss-Prot
Match: RS4_CANAL (40S ribosomal protein S4 OS=Candida albicans GN=RPS4 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.260e-21 Identity = 52/80 (65.00%), Postives = 62/80 (77.50%), Query Frame = 3 Query: 3 TRPVVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGTKPWVSLPKGKGIKLSIIEEARKR 239 T +VMVTGGRN GRVG+I +REK +G F+ +HI+DAL + F TRL NVF IG + KPWVSLPKGKGIKLSI EE +R Sbjct: 177 TGRLVMVTGGRNLGRVGVIVHREKLEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRR 256
BLAST of EY756710 vs. ExPASy Swiss-Prot
Match: RS4_YEAST (40S ribosomal protein S4 OS=Saccharomyces cerevisiae GN=RPS4A PE=1 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 3.263e-20 Identity = 45/76 (59.21%), Postives = 59/76 (77.63%), Query Frame = 3 Query: 12 VVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKR 239 +V VTGGRN GR+G I ++E+H G F+ +HI+D+L + F TRL NVF IG+ KP++SLPKGKGIKLSI EE +R Sbjct: 180 LVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRR 255
BLAST of EY756710 vs. ExPASy Swiss-Prot
Match: RS4_CAEEL (40S ribosomal protein S4 OS=Caenorhabditis elegans GN=rps-4 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.712e-19 Identity = 47/73 (64.38%), Postives = 55/73 (75.34%), Query Frame = 3 Query: 21 VTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKR 239 VTGGRN GRVGII +RE+ G+ + IHI+D+ GH FATR+ NVF IGKG K VSLP G GI+LSI EE KR Sbjct: 182 VTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGAGIRLSIAEERDKR 254
BLAST of EY756710 vs. ExPASy Swiss-Prot
Match: RS4_DICDI (40S ribosomal protein S4 OS=Dictyostelium discoideum GN=rps4 PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 3.054e-18 Identity = 39/70 (55.71%), Postives = 53/70 (75.71%), Query Frame = 3 Query: 18 MVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEE 227 M+ GG N GRVG + +REKH GSF+ +H+ D GH+FATRL NVF IGK ++ +VSLP GKG++ S ++E Sbjct: 182 MIVGGHNLGRVGAVTHREKHPGSFDIVHVTDTAGHQFATRLSNVFIIGKASQTFVSLPAGKGVRRSRVDE 251
BLAST of EY756710 vs. ExPASy Swiss-Prot
Match: RS4_TETTH (40S ribosomal protein S4 OS=Tetrahymena thermophila PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 9.826e-17 Identity = 37/76 (48.68%), Postives = 57/76 (75.00%), Query Frame = 3 Query: 12 VVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKR 239 V + G N GRVGII++ EKH+GSF+ H++DA G+ FATRLGN+F +G+G K ++ LP G G++ +I+EE +++ Sbjct: 181 VCYIQQGNNIGRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKLYIELPSGDGVRETILEERKRK 256 The following BLAST results are available for this feature:
BLAST of EY756710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756710 ID=EY756710; Name=EY756710; organism=Citrus sinensis; type=EST; length=527bpback to top |