EY756701

Overview
NameEY756701
Unique NameEY756701
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756701 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSJ (Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 3 
Query:   51 KDLYGHIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 305
            KDLYG+IVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  293 KDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY756701 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSI (Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 3 
Query:   51 KDLYGHIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 305
            KDLYG+IVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  293 KDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY756701 vs. ExPASy Swiss-Prot
Match: ACT1_ARATH (Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 3 
Query:   51 KDLYGHIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 305
            KDLYG+IVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  293 KDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY756701 vs. ExPASy Swiss-Prot
Match: ACT11_SOLTU (Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 3 
Query:   51 KDLYGHIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 305
            KDLYG+IVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  293 KDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY756701 vs. ExPASy Swiss-Prot
Match: ACT11_ARATH (Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.078e-41
Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 3 
Query:   51 KDLYGHIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 305
            KDLYG+IVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  293 KDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY756701 vs. ExPASy Swiss-Prot
Match: ACT7_SOLTU (Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.055e-40
Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 3 
Query:   51 KDLYGHIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 305
            KDLYG+IVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K E+DESGPSIVHRKCF
Sbjct:  293 KDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEFDESGPSIVHRKCF 377
[Close]
BLAST of EY756701 vs. ExPASy Swiss-Prot
Match: ACT3_SOLTU (Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.378e-40
Identity = 80/85 (94.12%), Postives = 84/85 (98.82%), Query Frame = 3 
Query:   51 KDLYGHIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 305
            KDLYG+IVLSGG+TMFPGIADRMSKE+TALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  293 KDLYGNIVLSGGTTMFPGIADRMSKELTALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of EY756701 vs. ExPASy Swiss-Prot
Match: ACT1_PEA (Actin-1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.378e-40
Identity = 81/85 (95.29%), Postives = 83/85 (97.65%), Query Frame = 3 
Query:   51 KDLYGHIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 305
            KDLYG+IVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISK EYDE GPSIVHRKCF
Sbjct:  292 KDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDERGPSIVHRKCF 376
[Close]
BLAST of EY756701 vs. ExPASy Swiss-Prot
Match: ACT_PINCO (Actin (Fragment) OS=Pinus contorta PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.800e-40
Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 3 
Query:   51 KDLYGHIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 305
            KDLYG+IVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EY+ESGPSIVHRKCF
Sbjct:   77 KDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKTEYEESGPSIVHRKCF 161
[Close]
BLAST of EY756701 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSJ (Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.350e-40
Identity = 80/85 (94.12%), Postives = 84/85 (98.82%), Query Frame = 3 
Query:   51 KDLYGHIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 305
            KDLYG+IVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHRKCF
Sbjct:  293 KDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
The following BLAST results are available for this feature:
BLAST of EY756701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 413
Match NameE-valueIdentityDescription
ACT1_ORYSJ8.078e-4195.29Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE... [more]
ACT1_ORYSI8.078e-4195.29Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2... [more]
ACT1_ARATH8.078e-4195.29Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=... [more]
ACT11_SOLTU8.078e-4195.29Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1[more]
ACT11_ARATH8.078e-4195.29Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=... [more]
ACT7_SOLTU1.055e-4095.29Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1[more]
ACT3_SOLTU1.378e-4094.12Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1[more]
ACT1_PEA1.378e-4095.29Actin-1 OS=Pisum sativum PE=2 SV=1[more]
ACT_PINCO1.800e-4095.29Actin (Fragment) OS=Pinus contorta PE=3 SV=1[more]
ACT2_ORYSJ2.350e-4094.12Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-F11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756701 ID=EY756701; Name=EY756701; organism=Citrus sinensis; type=EST; length=836bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAGA
AAGGATCTGTATGGACACATTGTTCTCAGTGGGGGTTCAACTATGTTCCC
CGGTATTGCCGACCGTATGAGCAAGGAAATCACAGCACTTGCTCCAAGCA
GCATGAAGATCAAGGTCGTGGCTCCACCAGAGAGAAAATACAGTGTTTGG
ATTGGAGGATCAATCCTTGCATCCCTCAGCACCTTCCAGCAGATGTGGAT
CTCAAAGGGCGAGTATGATGAGTCTGGTCCATCCATTGTCCACAGGAAAT
GCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGTTCTTTTTTTCCATTTA
GTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAGTTGGTTGACATGGAGA
AGTGCTAAGGTTGGGGCCATTGAAGGAGGCATATCTCGATATTGATGTTA
TTATACAAGCTTCTTACAGCGTTTGAGGGGGGCTTATTTCTGTACTCAAC
CGTCTTCCTTGCCTTGCATTCATCTGGGGTTCACCCAGTCCTTTTTCTTT
TTTTTCCTTTTTTTTTTAAAAGAAAGATGTTTTGTACTTGAAATAAAAAG
GGGTGGGGAGCTTTTCATTTCATTTTCCAAATTTCCAATTTGAAAGGTTT
TTTTTCTCCCCCTCCCCAAAGGGAACTTAAGGGTAATAGCTTTTGATGGA
AAAAATTTAATTAAGGCCCCCTGGCACCCAAAATTGGGGTATAAAAAAAA
TTTAAAACTTGGTGGAAGCTTTTCGGGGGGGNCCCCACNAACACAAAAAA
AAAAAAAGGGGGCCCCCTTAAAGAACACAAATATAA
back to top