EY756698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_PSYWF (Diaminopimelate epimerase OS=Psychrobacter sp. (strain PRwf-1) GN=dapF PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.897e-23 Identity = 56/132 (42.42%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPY 809 + F K HGLGNDF+++D + ++PE L DRN GIG D ++ P + D+ RIFNSDGSE E CGNG RCFARF+ + L+ KQ V T +G++ + G V+VDMG+P + +++P+ Sbjct: 3 IEFTKMHGLGNDFMVID-LVTQRLELTPELITLLADRNLGIGFDQLLVVEPPMRPDVDFRYRIFNSDGSEVEQCGNGARCFARFV-QARKLSFKQRIRVETKSGILTLSTDNYGWVEVDMGKPRFEPAEIPF 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_PSEPF (Diaminopimelate epimerase OS=Pseudomonas fluorescens (strain Pf0-1) GN=dapF PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.897e-23 Identity = 62/151 (41.06%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELDVDG 866 L F K HGLGNDF+++D S I P+ A DR+ GIG D ++ P D+ RIFNSDGSE E CGNG RCFARF+ + + L K+ V T G+I + +DG++ V+MG P L +D+P++ ++DVDG Sbjct: 3 LRFTKMHGLGNDFMVLD-LVSQHAHIQPKHAKMWGDRHTGIGFDQLLIVEAPSNPDVDFRYRIFNSDGSEVEQCGNGARCFARFVLD-KRLTAKRQIRVETKGGIIELDVRNDGQIGVNMGAPRLVPADIPFQ----APEQALSYQVDVDG 147
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_BURXL (Diaminopimelate epimerase OS=Burkholderia xenovorans (strain LB400) GN=dapF PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.897e-23 Identity = 63/159 (39.62%), Postives = 87/159 (54.72%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEP-RISPEQAAKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYK---LSANKDXSVXKSELDVDG-VKW 875 L F K HG GNDF+++D T+P ++P Q L DR+FG+GAD ++ P V G D+ RIFN DG E E CGNG RCF +F+ E L ++S V G I ++G+V VDMG P+ VP+ L ++ + LDV G +W Sbjct: 3 LKFTKMHGAGNDFVVLDGY--TQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVAGVDFRYRIFNCDGGEVEHCGNGARCFVKFVRE-RGLTDQRSVRVQVQKGTITLTMQENGEVLVDMGTPVFDPERVPFATKGLEGRREGADTLWPLDVSGTTRW 158
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_RALPJ (Diaminopimelate epimerase OS=Ralstonia pickettii (strain 12J) GN=dapF PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.395e-23 Identity = 55/132 (41.67%), Postives = 77/132 (58.33%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPY 809 LHF K HG GNDF+++D T +PEQ A + DR+FG+GAD ++ D+ RIFN DG E E CGNG RCF +F+ + L K++ V G+ DDG+V VDMG P+ +A+ +P+ Sbjct: 3 LHFTKMHGAGNDFVVLDGIQ-TPIDFTPEQWAAIADRHFGVGADQLLLVERSTRPDVDFRYRIFNHDGGEVEHCGNGARCFVKFVTD-RGLTDKRTVRVEVMNGIATLTMQDDGQVTVDMGAPVFEAARLPF 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_METM6 (Diaminopimelate epimerase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=dapF PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.395e-23 Identity = 59/135 (43.70%), Postives = 87/135 (64.44%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAK-LCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGL----IVPENSDDGKVKVDMGEPILKASDVP 806 + F K HGLGND+I VD ++ +P + ++ + DR+FGIG+DG++ +P + D+ MR+FNSDGSE EMCGN +RC +F+ + + + K + T+ T AG+ + EN VKVDMGEPILKA +P Sbjct: 1 MKFTKMHGLGNDYIYVDA--ISQKIENPNEISRFVSDRHFGIGSDGLVLILPS-DLADFKMRMFNSDGSEAEMCGNAIRCVGKFVYD-KKMTDKSTITIETLAGIKVLEMTIENDKVVLVKVDMGEPILKAETIP 131
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_BURP8 (Diaminopimelate epimerase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=dapF PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.395e-23 Identity = 62/159 (38.99%), Postives = 91/159 (57.23%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEP-RISPEQAAKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLS---ANKDXSVXKSELDVDG-VKW 875 L F K HG GNDF+++D T+P ++ Q L +R+FG+GAD ++ P V+G D+ RIFN DG E E CGNG RCF +F+ + L K+S V G+I D+G+V VDMG P+ + VP+ S A ++ + L+V+G +W Sbjct: 3 LKFTKMHGAGNDFVVLDGY--TQPLNLTETQVRALANRHFGVGADQLLVVEKPTVDGVDFRYRIFNCDGGEVEHCGNGARCFVKFVRD-SRLTDKRSVRVQVQKGVITLTMQDNGEVVVDMGAPVFEPVQVPFDASGVEARREGNDTLYALEVNGETRW 158
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_META3 (Diaminopimelate epimerase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=dapF PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.353e-23 Identity = 62/152 (40.79%), Postives = 84/152 (55.26%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISP--EQAAKLCDRNFGIGADGVIFAMPGVNGT-DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVP----ENSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSE 851 L+F K HGLGND+I+++ + + + E + K+C R F IGADGVIF P + D RIFNSDGSE EMCGNG+RCF++F+ E + K V T GL V EN+ +KV MG P + D+P + + V E Sbjct: 3 LNFTKMHGLGNDYIVINEFDGEKIKEDEKAEFSKKICKRGFSIGADGVIFVQPATDEKYDIRFRIFNSDGSEAEMCGNGIRCFSKFV--YERVMQKNPLNVETMGGLRVSEMNIENNIVKSIKVFMGAPTFELKDIPMVVEGKSENDVFLDE 152
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_THISH (Diaminopimelate epimerase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=dapF PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.425e-22 Identity = 60/157 (38.22%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN--GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELDVDGVKWNV 881 + F K HGLGNDF+++D + +SP+Q L R FG+G D V+ + D+ RIFN+DG+E E CGNG RCFA F+ E L K V T AG+I + DG+V VDMG P LK +P++ + ++ L+V+G + + Sbjct: 3 IQFSKMHGLGNDFVVIDAIHQPVD-LSPDQVRLLAHRRFGVGCDQVLLVERPSDPAAADFRYRIFNADGNEVEQCGNGARCFAVFVRE-RGLTAKDHIPVETAAGIIHLQVQPDGQVTVDMGPPRLKPWQIPFE----AESAMTSYPLEVEGETYEI 153
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_PSEU2 (Diaminopimelate epimerase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=dapF PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.425e-22 Identity = 61/151 (40.40%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELDVDG 866 L F K HGLGNDF+++D S I P+ A + DR+ GIG D ++ P D+ RIFNSDGSE E CGNG RCFARF+ + + L K+ V T +G+I + DG++ VDMG P ++P++ + +DVDG Sbjct: 3 LRFTKMHGLGNDFMVLD-LVSQHAHILPKHAKQWGDRHTGIGFDQLLLVEAPNNPDVDFRYRIFNSDGSEVEQCGNGARCFARFVLD-KRLTAKKQIRVETKSGIIELDIRSDGQISVDMGPPRFVPEEIPFEAAEQATCYT----VDVDG 147
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_PSEAE (Diaminopimelate epimerase OS=Pseudomonas aeruginosa GN=dapF PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.425e-22 Identity = 61/151 (40.40%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELDVDG 866 L F K HGLGNDF+++D S + P+ DRN GIG D ++ P D+ RIFN+DGSE E CGNG RCFARF+ + + L K+S V T G+I DG+V VDMG P L +++P++ + E++V+G Sbjct: 3 LRFTKMHGLGNDFMVLD-LVSQHAHVQPKHVKLWGDRNTGIGFDQLLIVEAPSSPDVDFRYRIFNADGSEVEQCGNGARCFARFVQD-KRLTVKKSIRVETKGGIIELNIRPDGQVTVDMGPPRLAPAEIPFQ----AEREALSYEIEVNG 147 The following BLAST results are available for this feature:
BLAST of EY756698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 371
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756698 ID=EY756698; Name=EY756698; organism=Citrus sinensis; type=EST; length=892bpback to top |