EY756698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_CARHZ (Diaminopimelate epimerase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dapF PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.019e-28 Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVD---NRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVP 806 + F+K HGLGNDF++VD N+N +S + A K+CDR FGIGADG++ +P D+ MRI NSDGSE EMCGN +RC AR+ E N K+ V T AG+I PE ++ V+VDMG PILK ++P Sbjct: 1 MEFLKMHGLGNDFVVVDEIKNQNLVNKNLS-DLAKKICDRRFGIGADGLVLLLPSEKA-DFKMRIINSDGSEAEMCGNAIRCVARYYVEKYN-PAKKQLEVETLAGIIKPEVLENNMVRVDMGRPILKPQEIP 130
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_MOOTA (Diaminopimelate epimerase OS=Moorella thermoacetica (strain ATCC 39073) GN=dapF PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.056e-28 Identity = 71/160 (44.38%), Postives = 90/160 (56.25%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVP----ENSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELDVDGVKWNVT 884 +HFVK HGLGNDF+LV+ P P A ++C R FGIGADG+I +P MRIFN DGSEPEMCGNG+RCFAR++ E G++ V T AG+I P E V+VDMG P L+ +P A V ++V+G W T Sbjct: 1 MHFVKMHGLGNDFVLVNAMTEKVPGDLPGLARRVCHRRFGIGADGLILVLPSEQAR-LRMRIFNPDGSEPEMCGNGIRCFARYVYETGLAEGEE-LQVETLAGIIKPRLILEGGRVAGVRVDMGAPHLEREQIP---MAGTGSPVLDEPIEVNGETWRGT 155
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_DESAH (Diaminopimelate epimerase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=dapF PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.471e-27 Identity = 73/163 (44.79%), Postives = 100/163 (61.35%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQ--AAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPE--NSDDGKVK---VDMGEPILKASDVPYKLSANKDXSVXKSELDVDGVKWNVT 884 L+F K GLGNDF+++D+RN + P A KLC R FG+G DG+I + D +IFN DGSEPEMCGNG+RCFA+ + E + + KQ FTV T AG I+PE SD +V+ VDMGEPIL+ +P+K N+ +V ++ V G ++T Sbjct: 3 LNFTKMEGLGNDFVMLDDRNGAIVQTVPYPVLAKKLCSRRFGVGGDGIIIIIDSETA-DVGFKIFNPDGSEPEMCGNGMRCFAKLVFE-QGIVTKQRFTVETLAGTIIPEILLSDTRQVEAICVDMGEPILEPDRIPFK--CNRQRAV-NEQIQVKGETVSIT 160
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_THETN (Diaminopimelate epimerase OS=Thermoanaerobacter tengcongensis GN=dapF PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.509e-27 Identity = 69/141 (48.94%), Postives = 89/141 (63.12%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVP----ENSDDGKVKVDMGEPILKASDVPYKLSANK 827 + F K HGLGNDFI+++ + E E A KLCDR+FGIGADG++ P + D MRIFN+DGSE EMCGNG RCFA+++ E + + KQ TV T AG+I+P EN VKV MG PI ++S +P K K Sbjct: 1 MRFTKMHGLGNDFIVIE---AVEGVDYSELAVKLCDRHFGIGADGLLVVEPS-HIADIKMRIFNADGSEAEMCGNGSRCFAKYVYE-KGIVSKQKMTVETLAGVIMPELFVENGKIKSVKVYMGSPIFESSKIPVKSEKQK 136
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_AZOSE (Diaminopimelate epimerase OS=Azoarcus sp. (strain EbN1) GN=dapF PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.509e-27 Identity = 67/152 (44.08%), Postives = 89/152 (58.55%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDN-RNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELDVDG 866 L F K HGLGNDF+++D R S + ++PEQ +L DR+FGIG D ++ D+ RIFN+DG E E CGNG RCF RF+ E + L K+ V T +G+I P+ DDG V VDMG P+L+ + VP+ D LDV G Sbjct: 3 LRFTKMHGLGNDFVVIDAIRQSVD--LTPEQVRRLADRHFGIGCDQLLVVEEATRPDVDFRYRIFNADGGEVEQCGNGARCFVRFVHE-QGLTAKRRIRVETRSGIIAPQLEDDGLVTVDMGVPVLEPARVPFV----SDSDAIVQPLDVGG 147
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_PROMT (Diaminopimelate epimerase OS=Prochlorococcus marinus (strain NATL2A) GN=dapF PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.277e-27 Identity = 62/139 (44.60%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 420 HFVKYHGLGNDFILVDNRNSTEPRISPEQAAK----LCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSAN 824 +F KY GLGNDFI+ D R++ + + LC+RNFGIGADG+I + N M+I+NSDGSEPEMCGNG+RC F+ + +N + T AGLI+ + +KV+MGEPIL D+P KL N Sbjct: 4 NFSKYQGLGNDFIIFDARSNNLDHLFSKNKDNFIEHLCNRNFGIGADGIILILESNNKCFVRMKIYNSDGSEPEMCGNGIRCLIAFLNDNNEINELSEIPIETKAGLILTYIDGNENIKVNMGEPILSPLDIPTKLLMN 142
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_PROM1 (Diaminopimelate epimerase OS=Prochlorococcus marinus (strain NATL1A) GN=dapF PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.277e-27 Identity = 62/139 (44.60%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 420 HFVKYHGLGNDFILVDNRNSTEPRISPEQAAK----LCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSAN 824 +F KY GLGNDFI+ D R++ + + LC+RNFGIGADG+I + N M+I+NSDGSEPEMCGNG+RC F+ + +N + T AGLI+ + +KV+MGEPIL D+P KL N Sbjct: 4 NFSKYQGLGNDFIIFDARSNNLDHLFSKNKDNFIEHLCNRNFGIGADGIILILESNNKCFVRMKIYNSDGSEPEMCGNGIRCLIAFLNDNNEINELSEIPIETKAGLILTSIDCNENIKVNMGEPILSPLDIPTKLLMN 142
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_LARHH (Diaminopimelate epimerase OS=Laribacter hongkongensis (strain HLHK9) GN=dapF PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.280e-27 Identity = 71/158 (44.94%), Postives = 94/158 (59.49%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELDVDGVKWNVTL 887 L F K GLGNDF ++D T R++PEQ KL DR FGIG D ++ P + G D++ RIFN DG E E CGNG RCFARF+ + L ++ V T G+IVP +DDG V VDMG P + +D+P+ A +D + EL+V G VT+ Sbjct: 3 LKFTKMQGLGNDFAVLDGVRQTI-RLTPEQIRKLGDRRFGIGFDQLLLVEPPQDAGNDFSYRIFNCDGGEVEQCGNGARCFARFVFD-HGLTDRREIRVETARGVIVPRLADDGLVTVDMGPPRFRPADIPF--VAAEDAVI--HELEVAGQILGVTV 154
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_PELTS (Diaminopimelate epimerase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=dapF PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.300e-27 Identity = 68/161 (42.24%), Postives = 97/161 (60.25%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDN-RNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPE-NSDDGK---VKVDMGEPILKASDVPYKLSANKDXSVXKSELDVDGVKWNVT 884 +HF K HGLGNDFILVD + P P A K+CDR+FG+GADG++ +P + D +MRIFN DGSE EMCGN +RC A+++ E + V T AG+++PE ++G+ V+VDMGEP L+ S++P + V L+ G + +T Sbjct: 1 MHFTKAHGLGNDFILVDCFKEKVNPEDFPGLAVKMCDRHFGVGADGLVLLLPSPSA-DVSMRIFNPDGSEAEMCGNAIRCVAKYLYE-RGMVKADRIRVETLAGVMIPELLVEEGRVRLVRVDMGEPRLERSEIPME---GPPGRVLGEPLETGGAVYRIT 156
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_CLOTH (Diaminopimelate epimerase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=dapF PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.626e-26 Identity = 71/161 (44.10%), Postives = 98/161 (60.87%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPE-NSDDGK---VKVDMGEPILKASDVPYKLSANKDXSVXKSE-LDVDGVKWNVT 884 + F K HGLGND+I V+ T S E A K+ DR+FGIG+DG++ MP D+ MR+FNSDGSE EMCGN +RC +++ + + K V T AG+ V E DGK VKVDMGEPILK ++P N D + ++E +++DG ++ VT Sbjct: 1 MRFTKMHGLGNDYIYVNCFEETVENPS-EVAKKVSDRHFGIGSDGLVLIMPSERA-DFKMRMFNSDGSEAEMCGNAIRCVGKYVFD-RGMTNKNVIRVETLAGIKVLELTVQDGKAKLVKVDMGEPILKPENIP----VNSDKEIFRTEPVEIDGKEFKVT 154 The following BLAST results are available for this feature:
BLAST of EY756698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 371
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756698 ID=EY756698; Name=EY756698; organism=Citrus sinensis; type=EST; length=892bpback to top |