EY756698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_BACV8 (Diaminopimelate epimerase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=dapF PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14 Identity = 52/135 (38.52%), Postives = 73/135 (54.07%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAA-KLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAE----------LENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPIL 788 + F K G GND+I V+ +S P P +AA K + GIGADG++ + D++MRIFN+DGSE MCGN RC +++ E LE L+G + +HTG G++ V VDMG P+L Sbjct: 5 IKFTKMQGTGNDYIYVNTLSS--PLQDPIKAARKWSTYHTGIGADGLVL-IGASEKADFSMRIFNADGSEAMMCGNASRCIGKYVYEKGLTDKEVITLETLSGIKILKLHTGNGVV-------KDVTVDMGTPLL 129
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_COREF (Diaminopimelate epimerase OS=Corynebacterium efficiens GN=dapF PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.436e-14 Identity = 50/131 (38.17%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 423 FVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAM---------PGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAG----LIVPENSDDGKVKVDMG 776 F K H NDFI++ + + T ++ ++ +LCDR G+GADGV+ + PGV+ + M N+DGS EMCGNGVR FA ++A L FT+ T AG ++ + DD V+VDMG Sbjct: 7 FAKGHATENDFIIIHDPDGTID-LTADEVTRLCDRRAGLGADGVLRVVRAGELGVQTPGVDPGWWFMDYRNADGSLAEMCGNGVRVFAHWLA-AHQLVDTTDFTIGTRAGARSVTVLSADRDDAVVRVDMG 135
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_RICPR (Diaminopimelate epimerase OS=Rickettsia prowazekii GN=dapF PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.087e-14 Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMG 776 ++FVK HGLGNDF++V+ R+ A + DR+ GIG D I N YTM I+N DGS ++CGN +RC A+ I L+ GKQ+ TV G ++ K+ V++G Sbjct: 5 INFVKMHGLGNDFVIVNKRDLATSYNLSHLAKNMADRHTGIGCDQCIIYEE--NNDFYTMIIYNIDGSSAKLCGNAIRCLAKLI-YLD--TGKQNITVMVGKKKLLCNVKAANKISVNVG 119
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_BRUME (Diaminopimelate epimerase OS=Brucella melitensis GN=dapF PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.087e-14 Identity = 49/147 (33.33%), Postives = 69/147 (46.94%), Query Frame = 3 Query: 423 FVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELDVD 863 F + +GLGN I+ D R + I+ A +L + + P GTDY + I N DG++ + CGNG RC + +A G+ +FT T AG++ DDG + VDMG P D+P A K EL VD Sbjct: 7 FARMNGLGNQIIVADMRGRADS-ITSAAAIRLASDSETAFDQIMAIHDPRTPGTDYYIAIINCDGTQAQACGNGTRCVVQALAA---ETGRHAFTFETRAGILTATEHDDGLISVDMGTPRFDWQDIPL---AQAVADTRKIELQVD 146
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_STRCO (Diaminopimelate epimerase OS=Streptomyces coelicolor GN=dapF PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.256e-14 Identity = 51/137 (37.23%), Postives = 71/137 (51.82%), Query Frame = 3 Query: 423 FVKYHGLGNDFILV-DNRNSTEPRISPEQAAKLCDRNFGIGADGVIF-----AMPGVNG----TDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDV 803 F+K HG NDF++V D N+ + + P A LCDR G+G DG++ A P G ++ M N DGS EMCGNGVR FAR++ ++ + V T G+ + +G V V MG +L A DV Sbjct: 7 FLKGHGTENDFVIVPDPENALD--LPPAAVAALCDRRAGLGGDGLLHVVRSAAHPEARGMAAEAEWFMDYRNGDGSVAEMCGNGVRVFARYLQHAGHVT-EGDLAVATRGGVKTVHIAKNGDVTVGMGRALLPAGDV 140
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_CORGB (Diaminopimelate epimerase OS=Corynebacterium glutamicum (strain R) GN=dapF PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.209e-13 Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 423 FVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPG-------VNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGL----IVPENSDDGKVKVDMGEP 782 F K H NDFI++ + ++ ++PE KLCDR GIGADG++ + V+ + + M N+DGS EMCGNGVR FA ++ +L SF + T AG+ I+ + +V+VDMG P Sbjct: 7 FAKGHATENDFIIIPDEDARLD-LTPEMVVKLCDRRAGIGADGILRVVKAADVEGSTVDPSLWFMDYRNADGSLAEMCGNGVRLFAHWLYS-RSLVDNTSFDIGTRAGVRHVDILQADQHSAQVRVDMGIP 135
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_BACFR (Diaminopimelate epimerase OS=Bacteroides fragilis GN=dapF PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13 Identity = 49/128 (38.28%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAA-KLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGK----VKVDMGEPI 785 + F K HG GND+I V+ P PE+AA + + GIG+DG++ + + D++MRIFN+DGSE MCGN RC +++ E L K T+ T +G+ + E +G+ V VDMG P+ Sbjct: 5 IQFTKMHGTGNDYIYVNTLRF--PIARPEKAAIEWSAYHTGIGSDGLVL-IGHSDKADFSMRIFNADGSEAMMCGNASRCIGKYLYEY-GLTSKNVITLDTLSGIKILELHLEGRTVETVTVDMGVPL 128
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_MESSB (Diaminopimelate epimerase OS=Mesorhizobium sp. (strain BNC1) GN=dapF PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13 Identity = 51/146 (34.93%), Postives = 71/146 (48.63%), Query Frame = 3 Query: 423 FVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELDV 860 F K +GLGN I+ D R + R+ PE A +L + P + GT+ + I NSDGS + CGNG+RC + L G+ SFT T AG++ E +G + VDMG+P D+P A + K EL V Sbjct: 7 FAKMNGLGNAIIVADMRGRAD-RVRPEAAQRLASDPATHFDQIMAIHDPRLEGTENYIEIINSDGSVAQACGNGMRC---VVQRLAAETGRPSFTFETIAGVLSAEEHANGLISVDMGKPRFGWQDIPL---AEEFHDTRKIELQV 145
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_CAMJ8 (Diaminopimelate epimerase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=dapF PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13 Identity = 48/121 (39.67%), Postives = 68/121 (56.20%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGE 779 + F KY GNDF++ N + E R + A +LC+R GIGADG I +P D+ +N+DGS MCGNG R A F+ + +N SF TGAG+I + + D KV+V +G+ Sbjct: 1 MKFYKYCASGNDFVIT-NADRKEDRSA--LAKELCNRYEGIGADGFIVILPHEK-YDFEWEFYNNDGSRAAMCGNGSRAAAHFVHHINKINPNMSFL--TGAGVIKAKVNQD-KVEVSLGK 114
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_BARBK (Diaminopimelate epimerase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=dapF PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13 Identity = 45/128 (35.16%), Postives = 66/128 (51.56%), Query Frame = 3 Query: 423 FVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVP 806 F K +GLGN I+ D R + I+P QA + N D ++ P D+ + I+N+DGS + CGNG RC ++A N N +F + T G++ + DG + VDMG P L A D+P Sbjct: 5 FSKMNGLGNKIIVADLRKAIH-NITP-QAIQALASNPQTHFDQIMAIHPPTQDADFRIEIWNADGSMAKACGNGTRCVIEWLA---NHNLGNNFRLETSTGIVEGKRQTDGLISVDMGRPYLNAKDMP 127 The following BLAST results are available for this feature:
BLAST of EY756698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 371
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756698 ID=EY756698; Name=EY756698; organism=Citrus sinensis; type=EST; length=892bpback to top |