EY756698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_HALOH (Diaminopimelate epimerase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dapF PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.124e-26 Identity = 68/160 (42.50%), Postives = 93/160 (58.13%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGT-DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPE----NSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELDVDGVKWNV 881 L F K HG GNDFI+V+ N + S + A +LC R+F IGADG+I +P + D+ MRIFN+DGSE EMCGNG+RCFA ++ E NL + + T AG+I PE N D +KV+MG P K+ ++P + D V L + K N+ Sbjct: 3 LSFTKMHGTGNDFIMVNGSNYPDLDFS-KLARQLCRRHFSIGADGLIIVLPPESVEHDFRMRIFNADGSEAEMCGNGIRCFAHYLRE-NNLTTRDVLKIETLAGIITPEIVSYNGDKSLIKVNMGRPHFKSEEIPVNIEDELDY-VKNFPLKIGNKKLNI 159
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_BURVG (Diaminopimelate epimerase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=dapF PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.774e-26 Identity = 67/162 (41.36%), Postives = 91/162 (56.17%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYK---LSANKDXSVXKSELDVDG-VKWNVTL 887 L F K HG GNDF+++D + T P ++ Q L DR+FGIGAD ++ P V+G D+ RIFN DG E E CGNG RCF +F+ + L K+S V GLI D+G+V VDMG P+ + + VP+ L D + LDV G +W T+ Sbjct: 3 LSFTKMHGAGNDFVVLDGYSHTLPPLTDVQVRALADRHFGIGADQLLVVEKPTVDGADFKYRIFNCDGGEVEHCGNGARCFVKFVTD-RGLTDKRSVRVQVMKGLITLTMQDNGEVVVDMGAPVFEPAQVPFDASGLDGRTDGNDTLWPLDVGGATRWVSTV 163
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_LEPBA (Diaminopimelate epimerase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dapF PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.623e-26 Identity = 69/161 (42.86%), Postives = 97/161 (60.25%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPE--NSDDGKVK---VDMGEPILKASDVPYKLSANKDXSVXKSELDVDGVKWNVT 884 ++F K G+GND++ +D + R+SPEQ KL DRNFGIG DGVIF + N ++ M ++NSDGS EMCGNGVRC +F+ + L Q T+ TG G++ + +GKV+ VDMGEPILK S VP + D V ++V G +++ T Sbjct: 3 INFTKMEGIGNDYVYID-ATKNDIRLSPEQIQKLSDRNFGIGGDGVIF-IRNSNSGEFQMDMYNSDGSSSEMCGNGVRCVGKFVYD-HGLTKNQKPTIETGKGVLTLDLKTGTNGKVEMVTVDMGEPILKPSLVP--IVWKGDEPVINQVIEVQGKQYHFT 158
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_SHEFN (Diaminopimelate epimerase OS=Shewanella frigidimarina (strain NCIMB 400) GN=dapF PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.180e-26 Identity = 62/133 (46.62%), Postives = 80/133 (60.15%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYK 812 +HF K HGLGNDF++VD SPEQ +L DRNFGIG D ++ P + D+ RIFN+DGSE E CGNG RCFARF+ + L K V T +G I DG V V+MG P+++ S +P+K Sbjct: 2 IHFTKMHGLGNDFMVVDGVTQNV-FFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHYRIFNADGSEVEQCGNGARCFARFVRN-KGLTQKNKIRVSTNSGKITLRIERDGNVTVNMGVPVIEPSQIPFK 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_ELUMP (Diaminopimelate epimerase OS=Elusimicrobium minutum (strain Pei191) GN=dapF PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.180e-26 Identity = 67/143 (46.85%), Postives = 88/143 (61.54%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAA--KLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANKDXSV 839 + FVKY GLGNDFIL+D + +I A KLCDR+FGIGADG+I P + DY +RI NSDG+EPEMCGNG+RC RF+ + + ++ T T AG I E + VKVDMG P L A+ +P +S + +V Sbjct: 1 MEFVKYQGLGNDFILID---CVKIKIDGLNALGKKLCDRHFGIGADGLIAVFPSASA-DYKIRIINSDGTEPEMCGNGIRCAMRFV--FDYIKPQRKLTFETLAGPIKTELLAENLVKVDMGAPKLTAAQIPLNISDSDGRAV 137
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_HAHCH (Diaminopimelate epimerase OS=Hahella chejuensis (strain KCTC 2396) GN=dapF PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.072e-26 Identity = 66/157 (42.04%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMP-GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELDVDGVKWNVT 884 + F K HGLGNDF++VD S PEQ +L DRNFG+G D ++ P G D+ RIFN+DGSE E CGNG RCFARF+ E L K++ V T G+I + DG V VDMG P L +D+P+ + ++V+GV + ++ Sbjct: 3 IKFTKMHGLGNDFMVVD-LISQHAHFRPEQVRRLADRNFGVGFDQLLIVEPPGRPDADFRYRIFNADGSEVEQCGNGARCFARFVKE-NRLTNKKNIRVETKKGIIELIVNKDGLVTVDMGAPRLAPADIPFVAETQEAI----YPIEVNGVMYEIS 153
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_SHELP (Diaminopimelate epimerase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=dapF PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.798e-25 Identity = 62/132 (46.97%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPY 809 +HF K HGLGNDF++VD SPEQ +L DRNFGIG D ++ P + D+ RIFN+DGSE E CGNG RCFARF+ + + L KQ V T +G + DG V V+MG P+L+ S +P+ Sbjct: 2 IHFTKMHGLGNDFMVVDGVTQNV-YFSPEQIKRLADRNFGIGFDQLLLVEPPYDPDLDFHYRIFNADGSEVEQCGNGARCFARFV-KSKGLINKQKIKVSTSSGKMTLRLERDGSVTVNMGIPVLEPSRIPF 131
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_SHEAM (Diaminopimelate epimerase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=dapF PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.798e-25 Identity = 63/133 (47.37%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYK 812 +HF K HGLGNDF++VD SPEQ +L DRNFGIG D ++ P + D+ RIFN+DGSE E CGNG RCFARF+ + L K V T AG + DG V V+MG PIL + +P+K Sbjct: 2 IHFTKMHGLGNDFMVVDGVTQNV-FFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHYRIFNADGSEVEQCGNGARCFARFVRN-KGLTQKHKIKVSTSAGKMTLRLERDGGVTVNMGVPILDPAQIPFK 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_SACD2 (Diaminopimelate epimerase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=dapF PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.798e-25 Identity = 62/131 (47.33%), Postives = 79/131 (60.31%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVP 806 L F K HGLGNDF+++D S I+PE+A +L DR+FG+G D V+ P D+ RIFN DGSE E CGNG RCFA F+ + L K TV T G +V +D +V VDMG PIL +D+P Sbjct: 3 LRFTKMHGLGNDFVMID-AISQRVTITPERARQLADRHFGVGCDQVLVVETPDSPDADFKYRIFNHDGSEVENCGNGARCFAVFVRQ-RGLTAKSVITVETAVGRMVLHVQEDDQVTVDMGAPILSPADIP 131
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_TERTT (Diaminopimelate epimerase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=dapF PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.348e-25 Identity = 61/132 (46.21%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPY 809 L F K HGLGNDF+++D S + I+PE+A KL DR+FG+G D V+ P D+ RIFN+DGSE E CGNG RCFA F+ + L K V T AGL+ DD +V V+MG P+L + +P+ Sbjct: 3 LRFTKMHGLGNDFVMID-AISQKVTITPERARKLADRHFGVGCDQVLVVESPDNPDADFRYRIFNNDGSEVENCGNGARCFAVFVRQ-RQLTAKSDIVVETAAGLLRLHVLDDNQVTVNMGVPVLAPAQIPF 132 The following BLAST results are available for this feature:
BLAST of EY756698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 371
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756698 ID=EY756698; Name=EY756698; organism=Citrus sinensis; type=EST; length=892bpback to top |