EY756698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_RHOPA (Diaminopimelate epimerase OS=Rhodopseudomonas palustris GN=dapF PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12 Identity = 46/130 (35.38%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 423 FVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPG-VNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLI-VPENSDDGKVKVDMGEPILKASDVP 806 F K +G+GN+ ++VD R+ P ++P A + + D ++ P ++GT+ +RI+N+DGSE CGNG+RC AR ++ + + K T T AGL+ DG VDMGEP D+P Sbjct: 9 FAKMNGIGNEIVVVDLRDQPAP-VTPADARAVAAH---VPYDQLMLLQPARLSGTEAFVRIYNNDGSESGACGNGMRCVAR---QMFSGSEKNGLTFETRAGLLNCWRGPADGLYTVDMGEPKFGWQDIP 131
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_MYCA1 (Diaminopimelate epimerase OS=Mycobacterium avium (strain 104) GN=dapF PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12 Identity = 50/140 (35.71%), Postives = 68/140 (48.57%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMP---------------GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAG----LIVPENSDDGKVKVDMGE 779 + F K HG NDF+L+ + E R++ A LCDR G+GADGV+ GV G D+ M NSDGS +MCGNGVR FA ++ L + F V + AG + ++ V VDMG+ Sbjct: 1 MKFAKGHGTENDFVLLCD-TPAELRLTAAGVAALCDRRRGLGADGVLRVTTAGAAAAAGVLDRLPDGVAGDDWYMDYRNSDGSVAQMCGNGVRVFAHYL-RASGLETRDEFVVGSLAGPRPVTVHAADATGADVSVDMGK 138
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_CLAM3 (Diaminopimelate epimerase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=dapF PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12 Identity = 52/149 (34.90%), Postives = 75/149 (50.34%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN------------GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAE--LENLNGKQSFTVHTGAGLIVPENS------DDGKVKVDMGEPILKASDV 803 L F K G GNDF+L + + E ++ Q LCDR+FGIGADG I A+ ++ M N DGS EMCGNG+R F F+ E L L ++ + T AG+ + S D G+ ++ GEP+++A D+ Sbjct: 4 LQFTKGQGTGNDFVLFADP-AGEIDLTDTQVQALCDRHFGIGADGTIRAVLSTRIPEGRAALEEDPDAEWFMDYRNVDGSPAEMCGNGIRVFTLFLIENGLIELPPGRTIPIGTRAGVRDVQRSGSGFQVDLGRWELAGGEPLVRAKDL 151
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_BUCAP (Diaminopimelate epimerase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=dapF PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12 Identity = 43/139 (30.94%), Postives = 74/139 (53.24%), Query Frame = 3 Query: 390 FLDRRESGFLHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGT-DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDV 803 F + ++ ++F K HGLGNDF+++++ + ++ L +RN G+G D ++ N D+ RIFN++G+E E CGNG RC F+ L+ L K+ + T I + D ++V+M EP K ++ Sbjct: 2 FSNYKKKKKIYFSKMHGLGNDFMVIESIKQ-DFILTKSIIENLSNRNTGVGFDQLLLIEKSNNFKFDFHYRIFNANGNEVEQCGNGARCVGLFLF-LKGLINKRKIMLSTNKKNISIKFMSDNNIQVNMNEPSFKLEEI 138
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_RICTY (Diaminopimelate epimerase OS=Rickettsia typhi GN=dapF PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12 Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMG 776 ++FVK HGLGNDF++V R+ + A + DR+ GIG D I N YTM I+N DGS ++CGN RC A+ I L+ GK+ T+ G ++ K+ V++G Sbjct: 5 INFVKMHGLGNDFVIVHKRDLATVCNLSQLAKNMADRHTGIGCDQCIIYEEYNN--VYTMIIYNIDGSNAKLCGNATRCLAKLI-YLD--TGKKDITIMVGKKKLLCNVEAANKISVNVG 119
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_METPB (Diaminopimelate epimerase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=dapF PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12 Identity = 43/131 (32.82%), Postives = 65/131 (49.62%), Query Frame = 3 Query: 423 FVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAE---LENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVP 806 F+K HG GN +++D R T R++P +A + ++ P GTD MRI+N+DGSE CGNG RC + + + T+ T AGL+ + D VDMG+P L+ ++P Sbjct: 9 FLKMHGAGNAIVVLDLRG-TSIRVAPAEARAIAADAHSRFDQLMVVHDPVTPGTDAFMRIYNTDGSESGACGNGTRCVGYALLDDPAMARPAENGCLTLETKAGLVAVKRVTDRSFTVDMGQPRLRWDEIP 138
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_RHOPT (Diaminopimelate epimerase OS=Rhodopseudomonas palustris (strain TIE-1) GN=dapF PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 423 FVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPG-VNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLI-VPENSDDGKVKVDMGEPILKASDVP 806 F K +G+GN+ ++VD R+ P ++P A + + D ++ P + GT+ +RI+N+DGSE CGNG+RC AR + + NG T T AGL+ DG VDMGEP D+P Sbjct: 9 FAKMNGIGNEIVVVDLRDQPAP-VTPADARAVAAH---VPYDQLMLLQPARLPGTEAFVRIYNNDGSESGACGNGMRCVARQMFAGSDKNG---LTFETRAGLLNCWRGPADGLYTVDMGEPKFGWQDIP 131
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_RHOE4 (Diaminopimelate epimerase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=dapF PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 50/139 (35.97%), Postives = 71/139 (51.08%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADG--------------VIFAMP-GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAG----LIVPENSDDGKVKVDMG 776 + F K HG NDF+++ + + + P + + LCDR G+GADG V+ A+P GV D+ M NSDGS EMCGNGVR FA ++ + L K F V + AG ++ ++ G V V MG Sbjct: 4 MDFSKGHGTQNDFVVLPDLD-VRVDLEPARVSALCDRQRGLGADGILRVARAGALADAGVLGALPDGVAAEDWFMDYRNSDGSIAEMCGNGVRVFAHYL-KASGLESKDEFVVGSRAGARPVVVHGYDATHGDVTVAMG 140
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_LISMH (Diaminopimelate epimerase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dapF PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 41/92 (44.57%), Postives = 51/92 (55.43%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAA----KLCDRNFGIG-ADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAE 674 +HF K HG NDF LVD + S EQ A KLCDR +G ADG+++ G MR+ NSDGS MCGNG+R AR++ E Sbjct: 4 IHFTKVHGSQNDFFLVDEEENLITEWSDEQRADFAIKLCDRKHSLGGADGILYVTKSSEVGPIGQMRVVNSDGSIASMCGNGLRTVARYLLE 95
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_CLAMS (Diaminopimelate epimerase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=dapF PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12 Identity = 53/150 (35.33%), Postives = 75/150 (50.00%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN------------GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAE--LENLNGKQSFTVHTGAGLIVPENSDDGKVKVDM-------GEPILKASDV 803 L F K G GNDF+L + + E ++ Q LCDR+FGIGADG I A+ ++ M N DGS EMCGNG+R F F+ E L L ++ + T AG+ + S G +VD+ GEP+++A D+ Sbjct: 4 LQFTKGQGTGNDFVLFADP-AGEIDLTDTQVQALCDRHFGIGADGTIRAVLSSRIPEGRAALDEDPDAEWFMDYRNVDGSPAEMCGNGIRVFTLFLIENGLIELPPGRTVPIGTRAGVRDVQRSGSG-FQVDLGRWALAGGEPLVRAKDL 151 The following BLAST results are available for this feature:
BLAST of EY756698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 371
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756698 ID=EY756698; Name=EY756698; organism=Citrus sinensis; type=EST; length=892bpback to top |