EY756698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_IDILO (Diaminopimelate epimerase OS=Idiomarina loihiensis GN=dapF PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.006e-25 Identity = 61/133 (45.86%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYK 812 LHF K HGLGNDF++VDN ++P+Q + DR+ GIG D ++ P + D+ RIFN+DGSE CGNG RCFA+F+ + +NL+ K V T AG +V DG+V VDMGEP+ + + VP+K Sbjct: 3 LHFSKMHGLGNDFMVVDNVTQNL-YVNPDQIRRWADRHTGIGFDQMLLVEPPYDPDLDFHYRIFNADGSEVAQCGNGARCFAKFV-KAKNLSNKNHLKVSTKAGKMVLHLEKDGQVTVDMGEPLFEPAAVPFK 133
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_NITEC (Diaminopimelate epimerase OS=Nitrosomonas eutropha (strain C91) GN=dapF PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.232e-25 Identity = 56/134 (41.79%), Postives = 83/134 (61.94%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVD--NRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYK 812 L F K HGLGNDFI+++ N+ ++ + P +L DR+FGIG D ++ G D+ RIFN+DG E E CGNG RCFARF+ + NL K + V T G+I P ++G+V V+MG P + +++P++ Sbjct: 3 LQFTKMHGLGNDFIVINAINQPASLTFLDPATIRRLADRHFGIGFDQLLIVEQAREGGDFRYRIFNADGGEVEQCGNGARCFARFVRDY-NLTDKNTIRVETARGIITPTIENNGEVSVNMGVPQFEPAEIPFQ 135
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_BURCM (Diaminopimelate epimerase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=dapF PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.232e-25 Identity = 58/135 (42.96%), Postives = 81/135 (60.00%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLS 818 L F K HG GNDF+++D + P ++ Q L +R+FGIGAD ++ P V+G D+ RIFN DG E E CGNG RCF +F+++ L K+S V GLI D+G+V VDMG P+ + VP+ +S Sbjct: 3 LSFTKMHGAGNDFVVLDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCGNGARCFVKFVSD-RGLTDKRSVRVQVMKGLITLTLQDNGEVVVDMGAPVFAPAQVPFDVS 136
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_NITMU (Diaminopimelate epimerase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=dapF PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.833e-25 Identity = 54/131 (41.22%), Postives = 79/131 (60.31%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPY 809 L F K HGLGNDFI++D N + +SPEQ +L DR+ G+G D ++ D+ RIFN+DG E E CGNG RCF R++ + + KQ + T +G+++PE DG+V V+MG P ++P+ Sbjct: 3 LKFTKMHGLGNDFIVIDAVNQ-QISLSPEQLRRLADRHLGVGCDQILLIEKAEGDADFRYRIFNADGGEVEQCGNGARCFVRYVHD-HGMTDKQQVRIETLSGVVIPELEADGEVTVNMGVPKFDPVEIPF 131
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_SHESH (Diaminopimelate epimerase OS=Shewanella sediminis (strain HAW-EB3) GN=dapF PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.924e-25 Identity = 61/132 (46.21%), Postives = 77/132 (58.33%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPY 809 +HF K HGLGNDF++VD SPEQ +L DRNFGIG D ++ P + D+ RIFN+DG E E CGNG RCFARF+ + L KQ V T G I DG V V+MG P+L+ +P+ Sbjct: 2 IHFTKMHGLGNDFMVVDGVTQNV-FFSPEQIKRLADRNFGIGFDQLLLVEPPYDPDLDFHYRIFNADGGEVEQCGNGARCFARFVRN-KGLTNKQKIRVSTSNGKITLRLERDGNVTVNMGIPVLEPGRIPF 131
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_SHEB9 (Diaminopimelate epimerase OS=Shewanella baltica (strain OS195) GN=dapF PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.924e-25 Identity = 61/133 (45.86%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYK 812 + F K HGLGNDF++VD SPEQ +L DRNFGIG D ++ P + D+ RIFN+DG+E E CGNG RCFARF+ + L K V T +G + DG V V+MG PIL+ S +P+K Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNV-FFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHYRIFNADGTEVEQCGNGARCFARFVRN-KGLTNKSKIRVSTSSGKMTLRLERDGTVTVNMGVPILEPSQIPFK 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_SHEB8 (Diaminopimelate epimerase OS=Shewanella baltica (strain OS185) GN=dapF PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.924e-25 Identity = 61/133 (45.86%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYK 812 + F K HGLGNDF++VD SPEQ +L DRNFGIG D ++ P + D+ RIFN+DG+E E CGNG RCFARF+ + L K V T +G + DG V V+MG PIL+ S +P+K Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNV-FFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHYRIFNADGTEVEQCGNGARCFARFVRN-KGLTNKSKIRVSTSSGKMTLRLERDGTVTVNMGVPILEPSQIPFK 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_SHEB5 (Diaminopimelate epimerase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=dapF PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.924e-25 Identity = 61/133 (45.86%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYK 812 + F K HGLGNDF++VD SPEQ +L DRNFGIG D ++ P + D+ RIFN+DG+E E CGNG RCFARF+ + L K V T +G + DG V V+MG PIL+ S +P+K Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNV-FFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHYRIFNADGTEVEQCGNGARCFARFVRN-KGLTNKSKIRVSTSSGKMTLRLERDGTVTVNMGVPILEPSQIPFK 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_SHEB2 (Diaminopimelate epimerase OS=Shewanella baltica (strain OS223) GN=dapF PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.924e-25 Identity = 61/133 (45.86%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYK 812 + F K HGLGNDF++VD SPEQ +L DRNFGIG D ++ P + D+ RIFN+DG+E E CGNG RCFARF+ + L K V T +G + DG V V+MG PIL+ S +P+K Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNV-FFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHYRIFNADGTEVEQCGNGARCFARFVRN-KGLTNKSKIRVSTSSGKMTLRLERDGTVTVNMGVPILEPSQIPFK 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_CHRVO (Diaminopimelate epimerase OS=Chromobacterium violaceum GN=dapF PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.924e-25 Identity = 60/136 (44.12%), Postives = 80/136 (58.82%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSA 821 L F K HGLGNDF+++D T ++PEQ L +R GIG D ++ P G D+ RIFN+DG E E CGNG RCFA+F+ + + L GK V T G+I PE DG +VDMG P + +D+P+ A Sbjct: 3 LKFSKMHGLGNDFMVIDGVRQTVS-LTPEQIRLLGNRQLGIGFDQLLLVEPAREAGHDFRYRIFNNDGGEVEQCGNGARCFAKFVRD-QGLTGKSRIEVETARGVIAPEYLGDGLARVDMGVPRFRPADLPFLADA 136 The following BLAST results are available for this feature:
BLAST of EY756698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 371
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756698 ID=EY756698; Name=EY756698; organism=Citrus sinensis; type=EST; length=892bpback to top |