EY756698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_ACIBC (Diaminopimelate epimerase OS=Acinetobacter baumannii (strain ACICU) GN=dapF PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.988e-24 Identity = 60/132 (45.45%), Postives = 82/132 (62.12%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMP-GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPY 809 L F K HGLGNDF++VD S + +L DR+FG+G D ++ P V D+ RIFN+DGSE E CGNGVRCFARF+ E +L K + TV T AG++ PE +G V+V+MG P +++P+ Sbjct: 3 LEFTKMHGLGNDFMVVD-LISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADFKYRIFNADGSEVEQCGNGVRCFARFVHE-RHLTNKTNITVQTKAGIVKPELGQNGWVRVNMGYPKFLPNEIPF 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_ACIB5 (Diaminopimelate epimerase OS=Acinetobacter baumannii (strain AB0057) GN=dapF PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.988e-24 Identity = 60/132 (45.45%), Postives = 82/132 (62.12%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMP-GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPY 809 L F K HGLGNDF++VD S + +L DR+FG+G D ++ P V D+ RIFN+DGSE E CGNGVRCFARF+ E +L K + TV T AG++ PE +G V+V+MG P +++P+ Sbjct: 3 LEFTKMHGLGNDFMVVD-LISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADFKYRIFNADGSEVEQCGNGVRCFARFVHE-RHLTNKTNITVQTKAGIVKPELGQNGWVRVNMGYPKFLPNEIPF 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_ACIB3 (Diaminopimelate epimerase OS=Acinetobacter baumannii (strain AB307-0294) GN=dapF PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.988e-24 Identity = 60/132 (45.45%), Postives = 82/132 (62.12%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMP-GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPY 809 L F K HGLGNDF++VD S + +L DR+FG+G D ++ P V D+ RIFN+DGSE E CGNGVRCFARF+ E +L K + TV T AG++ PE +G V+V+MG P +++P+ Sbjct: 3 LEFTKMHGLGNDFMVVD-LISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADFKYRIFNADGSEVEQCGNGVRCFARFVHE-RHLTNKTNITVQTKAGIVKPELGQNGWVRVNMGYPKFLPNEIPF 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_SHESR (Diaminopimelate epimerase OS=Shewanella sp. (strain MR-7) GN=dapF PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.597e-24 Identity = 60/133 (45.11%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYK 812 + F K HGLGNDF++VD SPEQ +L DRNFG+G D ++ P + D+ RIFN+DG E E CGNG RCFARF+ + L K V T AG + DG V V+MG P+L S +P+K Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNV-FFSPEQIRRLADRNFGVGFDQLLLVEPPYDPDLDFHYRIFNADGGEVENCGNGARCFARFVRN-KGLTNKNKIRVSTSAGKMTLRLERDGTVTVNMGVPVLDPSQIPFK 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_SHESM (Diaminopimelate epimerase OS=Shewanella sp. (strain MR-4) GN=dapF PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.597e-24 Identity = 60/133 (45.11%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYK 812 + F K HGLGNDF++VD SPEQ +L DRNFG+G D ++ P + D+ RIFN+DG E E CGNG RCFARF+ + L K V T AG + DG V V+MG P+L S +P+K Sbjct: 2 IQFTKMHGLGNDFMVVDGVTQNV-FFSPEQIRRLADRNFGVGFDQLLLVEPPYDPDLDFHYRIFNADGGEVENCGNGARCFARFVRN-KGLTNKNKIRVSTSAGKMTLRLERDGTVTVNMGVPVLDPSQIPFK 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_SHEDO (Diaminopimelate epimerase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=dapF PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.597e-24 Identity = 59/133 (44.36%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYK 812 +HF K HGLGNDF++VD SPEQ +L +RNFG+G D ++ P + D+ RIFN+DGSE E CGNG RCFARF+ + L K V T +G + DG V V+MG P+ S++P+K Sbjct: 2 IHFTKMHGLGNDFMVVDGVTQNV-FFSPEQIRRLANRNFGVGFDQLLLVEPPYDPDLDFHYRIFNADGSEVEQCGNGARCFARFVRN-KGLTQKNKIRVSTSSGKMTLRLERDGSVVVNMGVPVTDPSNIPFK 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_METMP (Diaminopimelate epimerase OS=Methanococcus maripaludis GN=dapF PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.597e-24 Identity = 62/135 (45.93%), Postives = 92/135 (68.15%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAK-LCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENS-DDGK---VKVDMGEPILKASDVP 806 + F K HGLGND+I VD ++ +P + +K + DR+FGIG+DG++ +P + D+ MR+FNSDGSE EMCGN +RC +F+ + + + K + T+ T AG+ V E + ++GK VKVDMGEPILKA ++P Sbjct: 1 MKFTKMHGLGNDYIYVDA--ISQKIENPNEISKFVSDRHFGIGSDGLVLILPS-DVADFKMRMFNSDGSEAEMCGNAIRCVGKFVYD-KKMTDKSTITIETLAGIKVLEMTIENGKVVLVKVDMGEPILKAEEIP 131
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_HERAR (Diaminopimelate epimerase OS=Herminiimonas arsenicoxydans GN=dapF PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.597e-24 Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLS 818 + F K HG GNDF+++D N + +P Q L DR FG+GAD ++ P G D+ RI+N+DG E E CGNG R F +F+ + + L KQ+ V T +G+I P +G++ VDMG PIL DVP+ +S Sbjct: 3 IKFTKMHGAGNDFVVIDAINQSI-HFTPAQWQHLADRRFGVGADQMLVVEKPQAAGVDFRYRIYNADGGEVEQCGNGARAFVKFVTD-KKLTDKQAIRVETMSGVIEPRLEANGQITVDMGAPILTPEDVPFDVS 135
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_DECAR (Diaminopimelate epimerase OS=Dechloromonas aromatica (strain RCB) GN=dapF PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.597e-24 Identity = 60/133 (45.11%), Postives = 78/133 (58.65%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDN-RNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPY 809 L F K HGLGNDF+++D R S +SPEQ L DR+FG+G D ++ G D+ RIFN+DG E E CGNG RCF RF+ + E L K+ V T G+I P DG V VDMG P +++P+ Sbjct: 3 LKFSKMHGLGNDFVVLDGVRQSVS--LSPEQLCYLADRHFGVGCDQILLVEKASQPGIDFRYRIFNADGGEVEQCGNGARCFVRFVHD-EGLTDKREIRVETMRGIISPRLEGDGNVTVDMGIPRFLPAEIPF 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_PSEU5 (Diaminopimelate epimerase OS=Pseudomonas stutzeri (strain A1501) GN=dapF PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.391e-24 Identity = 62/151 (41.06%), Postives = 88/151 (58.28%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVN-GTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELDVDG 866 L F K HGLGNDF+++D S I P+ A + DR+ G+G D ++ P N D+ RIFNSDGSE E CGNG RCFARF+ + + L K+ V T G+I + DG+++VDMG P L +++P++ + L+VDG Sbjct: 3 LRFTKMHGLGNDFMVID-LVSQHAHIQPKHAKQWGDRHTGVGFDQLLIVEPPQNPDVDFRYRIFNSDGSEVEQCGNGARCFARFVVD-KRLTVKRKIKVETKGGIIELDIRPDGQIRVDMGPPRLVPAEIPFQ----AEREALSYSLEVDG 147 The following BLAST results are available for this feature:
BLAST of EY756698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 371
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756698 ID=EY756698; Name=EY756698; organism=Citrus sinensis; type=EST; length=892bpback to top |