EY756698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_AZOSB (Diaminopimelate epimerase OS=Azoarcus sp. (strain BH72) GN=dapF PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.391e-24 Identity = 56/132 (42.42%), Postives = 79/132 (59.85%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMP-GVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPY 809 + F K HGLGNDF+++D T ++P + + DR+FG+G D ++ P G + D+ RIFN+DG E E CGNG RCF RF+ + + L K+ V T AG+I P DG V VDMG P L + +P+ Sbjct: 3 IRFTKMHGLGNDFVVID-ATRTPVDLTPARVKAIADRHFGVGCDQLLVVEPPGSDEVDFRYRIFNADGGEVEQCGNGARCFVRFVHD-KGLTDKREIRVETRAGVIAPALRPDGLVSVDMGVPELSPARIPF 132
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_NATTJ (Diaminopimelate epimerase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=dapF PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.429e-24 Identity = 66/167 (39.52%), Postives = 96/167 (57.49%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGT---DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGL---IVPEN--------------SDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELD 857 + F K HGLGNDFIL+ + R P+ A +LCDR FGIGADG++ N DY MRI+NSDGSE EMCGN +RC A+++A+ E +GK+ + T AG+ + EN S + VKV+M +P+LK+SD+P + +++ + +D Sbjct: 1 MKFEKMHGLGNDFILMKDFQ----RNYPDLAKRLCDRRFGIGADGLVIYSSCKNSNINADYQMRIYNSDGSEAEMCGNAIRCLAKYLAKTEETDGKR-LAIATTAGIKRVEIVENFDLMGEINLSGMVGSQEQLVKVNMEKPLLKSSDIPLAVKNDRNDIARQRPID 162
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_ACTSZ (Diaminopimelate epimerase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=dapF PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.784e-24 Identity = 63/139 (45.32%), Postives = 87/139 (62.59%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAK-LCDRNFGIGADGVIFAMPGVNGT-DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANK 827 +HF K HGLGNDF++VD T+ PE+ K L DR+ GIG D ++ P + D+ RIFN+DGSE CGNG RCFARF+ L+ L K+ V T G +V DDG+++V+MGEPI + + +P+ +ANK Sbjct: 1 MHFSKMHGLGNDFVVVDA--VTQNVFFPEEVIKKLADRHRGIGFDQLLLVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVT-LKGLTNKKDIAVSTAKGRMVLTVKDDGQIRVNMGEPIWEPAKIPF--NANK 134
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_PSESM (Diaminopimelate epimerase OS=Pseudomonas syringae pv. tomato GN=dapF PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.555e-24 Identity = 64/151 (42.38%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELDVDG 866 L F K HGLGNDF+++D S I P+ A + DR+ GIG D ++ P D+ RIFNSDGSE E CGNG RCFARF+ + + L K+ V T G+I E DG++ VDMG P L ++P++ + LDVDG Sbjct: 3 LRFTKMHGLGNDFMVLD-LVSQHAHILPKHAKQWGDRHTGIGFDQLLLVEAPNNPDVDFRYRIFNSDGSEVEQCGNGARCFARFVLD-KRLTAKKQIRVETKGGIIELEIRSDGQISVDMGPPRLVPEEIPFQAA----EQAKSYSLDVDG 147
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_LEPIN (Diaminopimelate epimerase OS=Leptospira interrogans GN=dapF PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.555e-24 Identity = 57/135 (42.22%), Postives = 85/135 (62.96%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLI-----VPENSDDGKVKVDMGEPILKASDVP 806 L F K G+GND++ +D+ + + R++PEQ K+ DRNFGIG+DGVIF G D+ M ++NSDGS EMCGNG+RC A++I + L ++ + TGAG++ + + V VDMG+P+L S +P Sbjct: 4 LKFTKMEGIGNDYVYIDSTRN-DIRLTPEQIQKISDRNFGIGSDGVIFIRNSKQG-DFMMDMYNSDGSSSEMCGNGIRCVAKYIYD-HGLTSSKNPKIETGAGILEVDLKIGSGNKVDLVSVDMGKPVLVPSQIP 135
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_LEPIC (Diaminopimelate epimerase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dapF PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.555e-24 Identity = 57/135 (42.22%), Postives = 85/135 (62.96%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLI-----VPENSDDGKVKVDMGEPILKASDVP 806 L F K G+GND++ +D+ + + R++PEQ K+ DRNFGIG+DGVIF G D+ M ++NSDGS EMCGNG+RC A++I + L ++ + TGAG++ + + V VDMG+P+L S +P Sbjct: 4 LKFTKMEGIGNDYVYIDSTRN-DIRLTPEQIQKISDRNFGIGSDGVIFIRNSKQG-DFMMDMYNSDGSSSEMCGNGIRCVAKYIYD-HGLTSSKNPKIETGAGILEVDLKIGSGNKVDLVSVDMGKPVLVPSQIP 135
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_BURTA (Diaminopimelate epimerase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=dapF PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.555e-24 Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFA-MPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLS 818 L F K HG GNDF+++D + P ++ L DR+FGIGAD ++ P V+G D+ RIFN DG E E CGNG RCF +F+ + L K S V G+I D+G+V VDMG P+ + + VP+ S Sbjct: 3 LSFTKMHGAGNDFVVLDGYSRALPPLTDALVRALADRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCGNGARCFVKFVRD-HGLTDKASVRVEVKHGVITLTMQDNGEVVVDMGAPVFEPARVPFDTS 136
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_ALCBS (Diaminopimelate epimerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=dapF PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.555e-24 Identity = 56/142 (39.44%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPR----ISPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANKD 830 L F K HGLGNDF+++D + P + ++ +L DR FG+G D ++ P D+ RI N+DGSE CGNG RCFARF+ E + L K+S V T AG + +DD ++ VDMG P +P A D Sbjct: 3 LRFTKMHGLGNDFMVIDGIRQSLPETGLPLPADEIRRLADRKFGVGFDQMLIVQPAQGDADFRYRILNADGSEVSQCGNGARCFARFVRE-QGLTDKKSIRVETAAGQMTLSVTDDDQITVDMGAPRWAPDAIPMTAKAEAD 143
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_CHRSD (Diaminopimelate epimerase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=dapF PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.867e-24 Identity = 62/156 (39.74%), Postives = 88/156 (56.41%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRISPEQAAKLCDRNFGIGADGVIFAMPGVNGT-DYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGLIVPENSDDGKVKVDMGEPILKASDVPYKLSANKDXSVXKSELDVDGVKWNV 881 LHF K HGLGNDF+++D + R+ E+ +L DR+ GIG D ++ P + D+ RIFN+DG+E E CGNG RCFARF+ + L K+ V T AG + DD +++VDMG P VP+ A+ L+VDG W++ Sbjct: 3 LHFTKMHGLGNDFVVID-LITQRARLDTERIRQLADRHVGIGFDQLLLVEPPRDPEMDFRYRIFNADGNEVENCGNGARCFARFVRD-NRLTHKREIRVETQAGPLTLRVEDDERIRVDMGVPRFAPEVVPFDAPADAPAHC----LEVDGETWDI 152
BLAST of EY756698 vs. ExPASy Swiss-Prot
Match: DAPF_METM7 (Diaminopimelate epimerase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=dapF PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.289e-23 Identity = 61/136 (44.85%), Postives = 88/136 (64.71%), Query Frame = 3 Query: 417 LHFVKYHGLGNDFILVDNRNSTEPRI-SPEQAAK-LCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLNGKQSFTVHTGAGL----IVPENSDDGKVKVDMGEPILKASDVP 806 + F K HGLGND+I VD +T +I +P + ++ + DR+FGIG+DG++ +P D+ MR+FNSDGSE EMCGN +RC +F+ + + + K + T+ T AG+ + EN VKVDMGEPILKA +P Sbjct: 1 MKFTKMHGLGNDYIYVD---ATSQKIENPNEISRFVSDRHFGIGSDGLVLILPS-EIADFKMRMFNSDGSEAEMCGNAIRCVGKFVYD-KKMTDKSTITIETLAGIKVLEMTVENDKVVLVKVDMGEPILKAETIP 131 The following BLAST results are available for this feature:
BLAST of EY756698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 371
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756698 ID=EY756698; Name=EY756698; organism=Citrus sinensis; type=EST; length=892bpback to top |