EY756697

Overview
NameEY756697
Unique NameEY756697
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13347 contig Csv1_Contig13347:1..888. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756697 vs. ExPASy Swiss-Prot
Match: GLGA2_SYNJA (Glycogen synthase 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=glgA2 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.705e-31
Identity = 59/142 (41.55%), Postives = 81/142 (57.04%), Query Frame = 1
Query:   16 KIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILA-DDVQFMFQVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAV 438
            K ALQ  LGL + PD  L+G + RL  QKGIDL+       LA  D QF   V+LGSG+  +E  +R+    +  +     G+   ++  I  G D+ LMPSRFEPCG++Q+ AMRYG +P+   TGGL    S H+  K +
Sbjct:  268 KAALQSRLGLTVNPDVFLMGMVARLVEQKGIDLLIQTLDRFLAYSDSQF---VLLGSGEAYYEGRIREMAERHPGRMAYQQGYQPQLAQLIYGGADVFLMPSRFEPCGISQMIAMRYGCVPIARRTGGLVDTVSHHIPSKGI 406          

HSP 2 Score: 47.3654 bits (111), Expect = 7.705e-31
Identity = 20/60 (33.33%), Postives = 35/60 (58.33%), Query Frame = 3
Query:  438 GEGTGWSFSPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 617
            G GTG+ F         T L  A   + +HK +W+ L +RGM  D++W+ +A++Y +++E
Sbjct:  405 GIGTGYCFDRYEALDFYTCLARAWEAF-QHKDTWQALQKRGMATDFSWQRSALEYLRLYE 463          
BLAST of EY756697 vs. ExPASy Swiss-Prot
Match: GLGA_CLOAB (Glycogen synthase OS=Clostridium acetobutylicum GN=glgA PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 7.707e-31
Identity = 55/133 (41.35%), Postives = 84/133 (63.16%), Query Frame = 1
Query:    4 RVRCKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFMFQVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR 402
            + + KI LQK L LP+  + P+IG + RL  QKG+DLI     ++L D +Q    V+LG+GD ++E+  +     Y +K    + FN  ++ +I    D+ LMPS+FEPCG+ QL A+RYG++P+V  TGGL+
Sbjct:  275 KTKNKIELQKMLNLPVSENIPMIGIVSRLVSQKGLDLISCVLEDLLQDGIQL---VVLGTGDAKYENMFKYFAWKYPNKLSANIQFNNSLAQKIYGASDMFLMPSKFEPCGIGQLIALRYGSLPIVRETGGLK 404          

HSP 2 Score: 42.3578 bits (98), Expect = 7.707e-31
Identity = 22/68 (32.35%), Postives = 34/68 (50.00%), Query Frame = 3
Query:  411 FNPFAREGSGEGTGWSFSPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 614
            FNP     +GEG G+SF+  +   ML  +R A   Y   K +W  L++  M  D +W  +A  Y  ++
Sbjct:  410 FNPI----TGEGNGFSFTNYNAHDMLHVIRNAEYFYYNEKYNWNKLVQTAMNDDNSWSKSAEIYRNLY 473          
BLAST of EY756697 vs. ExPASy Swiss-Prot
Match: GLGA_KOSOT (Glycogen synthase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=glgA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.148e-31
Identity = 70/129 (54.26%), Postives = 92/129 (71.32%), Query Frame = 1
Query:   16 KIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFMFQVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR 402
            KIALQKELGLP+  D P+IG I RL  QKG DLI  AA +IL++D+QF   V+LG+G+ ++E   +     + +K    + FNV ++ +I AG D+ LMPSR+EPCGL Q++AMRYGTIPVV  TGGLR
Sbjct:  270 KIALQKELGLPVI-DVPVIGLISRLVEQKGFDLIEAAAEKILSNDLQF---VVLGTGEERYERLFKSLGERFPEKVSANITFNVDLAQKIYAGSDMFLMPSRYEPCGLGQMFAMRYGTIPVVRFTGGLR 394          
BLAST of EY756697 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.390e-30
Identity = 67/128 (52.34%), Postives = 88/128 (68.75%), Query Frame = 1
Query:   16 KIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFMFQVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL 399
            K ALQ  +GLP+    PLIGFIGRL+ QKG D++  A  + +  DVQ    V+LG+G  +FE  +   E  Y +K +G   FNVP++H ITAG D +L+PSRFEPCGL QL+AMRYGT+P+  +TGGL
Sbjct:  383 KEALQAAVGLPVDKKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQI---VVLGTGKKEFEQEIEQLEVLYPNKAKGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTVPICASTGGL 507          
BLAST of EY756697 vs. ExPASy Swiss-Prot
Match: GLGA_SYNSC (Glycogen synthase OS=Synechococcus sp. (strain CC9605) GN=glgA PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.213e-30
Identity = 57/130 (43.85%), Postives = 80/130 (61.54%), Query Frame = 1
Query:   13 CKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILA-DDVQFMFQVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL 399
            CK  LQ+ +GL +R D  ++G + RL  QKG+DL+   A  +LA  D Q    V+LG+GD   ES +    + +  K   ++ ++  +S  I  G D  LMPSRFEPCG++QLYAMRYG++PVV   GGL
Sbjct:  256 CKKVLQERMGLEVREDAFVLGMVSRLVDQKGVDLLLQVADRLLAYTDTQI---VVLGTGDRGLESGLWQLASRHPGKCAVFLTYDDDLSRLIYGGSDAFLMPSRFEPCGISQLYAMRYGSVPVVRKVGGL 382          

HSP 2 Score: 48.1358 bits (113), Expect = 2.213e-30
Identity = 21/58 (36.21%), Postives = 34/58 (58.62%), Query Frame = 3
Query:  444 GTGWSFSPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 617
            GTG+ F         TAL  A   +R H+ SW  L +RGM +DY+W+ +A+ Y+ +++
Sbjct:  396 GTGFCFDRFEPVDFYTALVRAWEAFR-HRDSWTELQKRGMNQDYSWDRSAVDYDLMYK 452          
BLAST of EY756697 vs. ExPASy Swiss-Prot
Match: GLGA_THICR (Glycogen synthase OS=Thiomicrospira crunogena (strain XCL-2) GN=glgA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.214e-30
Identity = 54/115 (46.96%), Postives = 81/115 (70.43%), Query Frame = 1
Query:   58 DCPLIGFIGRLDHQKGIDLIRLAAPEILAD-DVQFMFQVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL 399
            D P+IG +GRL  QKGIDL+    PE++   +V+F   V++G+GD  FE  + +    Y ++   ++G++  ++H++ AG D+ LMPSRFEPCGLNQLY++ YGT P+VH+TGGL
Sbjct:  304 DDPVIGLVGRLVPQKGIDLVLEVLPELIEQTNVRF---VIVGTGDSLFEYQLTELAHQYPERLMIYIGYSESLAHKVEAGADLFLMPSRFEPCGLNQLYSLAYGTPPIVHSTGGL 415          

HSP 2 Score: 40.4318 bits (93), Expect = 2.214e-30
Identity = 17/61 (27.87%), Postives = 36/61 (59.02%), Query Frame = 3
Query:  435 SGEGTGWSFSPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 617
            +G+ TG+ F   S  ++ + +  A+  + + K +W+ L + GM +D++W  +A QY  +F+
Sbjct:  429 TGQATGFVFYDPSRHALKSTILHALHLFSK-KGTWQKLQKNGMRQDFSWTRSAKQYLALFK 488          
BLAST of EY756697 vs. ExPASy Swiss-Prot
Match: GLGA_HELMI (Glycogen synthase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=glgA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.884e-30
Identity = 58/130 (44.62%), Postives = 82/130 (63.08%), Query Frame = 1
Query:   10 RCKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFMFQVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL 399
            R K  LQ++ GLP+  + PL+G + RL  QKGIDL       +  +D+Q    V++G GDP++E   R  +  + +K   ++GF+ P++ R+  G D  LMPSRFEPCGL QL A RYG IP+V +TGGL
Sbjct:  281 RNKAELQRQFGLPVS-EAPLLGLVHRLVDQKGIDLFEGIEEALFREDLQL---VVVGQGDPRYEGLFRRLKQHFPEKVGLFIGFDTPLAQRVYGGSDFFLMPSRFEPCGLGQLIAFRYGAIPIVRSTGGL 406          

HSP 2 Score: 36.965 bits (84), Expect = 2.884e-30
Identity = 17/57 (29.82%), Postives = 30/57 (52.63%), Query Frame = 3
Query:  444 GTGWSFSPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 614
            G G  F     +  L A+R  +  YR+ K  W+ L+ + M  D++W  +A +Y Q++
Sbjct:  418 GNGVVFEAYQPDRFLEAIRRGLHLYRQ-KDRWQQLIAKVMRLDHSWRRSADEYMQLY 473          
BLAST of EY756697 vs. ExPASy Swiss-Prot
Match: GLGA_STRMU (Glycogen synthase OS=Streptococcus mutans GN=glgA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.891e-30
Identity = 58/133 (43.61%), Postives = 82/133 (61.65%), Query Frame = 1
Query:    4 RVRCKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFMFQVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR 402
            + + K ALQ+ +GLP+R D PL+G + RL  QKG  L+      ++  D+Q    V+LG+G   FE+        Y DK    + F++ ++ +I A  DI LMPS FEPCGL+Q+ AMRYGT+P+VH  GGLR
Sbjct:  274 KAKNKAALQERVGLPVREDVPLVGIVSRLTDQKGFQLVVDQLNTMMQLDLQI---VLLGTGYADFENAFAWFGHAYPDKMSANITFDLELAQQIYAASDIFLMPSAFEPCGLSQMMAMRYGTLPLVHEVGGLR 403          

HSP 2 Score: 41.2022 bits (95), Expect = 4.891e-30
Identity = 17/58 (29.31%), Postives = 29/58 (50.00%), Query Frame = 3
Query:  444 GTGWSFSPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 617
            GTG+ F   S   +   L  A+  Y   K  W+ L +  M  D++W+ A+  YE +++
Sbjct:  416 GTGFGFQDFSGYWLTKTLEAALDVYYNRKEDWKILQKNAMTTDFSWDTASQSYEHLYK 473          
BLAST of EY756697 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30
Identity = 67/128 (52.34%), Postives = 88/128 (68.75%), Query Frame = 1
Query:   16 KIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFMFQVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL 399
            K ALQ  +GLP+  + PLIGFIGRL+ QKG D++  A  + ++ DVQ +   +LG+G  +FE  +   E  Y DK RG   FNVP++H ITAG D +L+PSRFEPCGL QL+AMRYGT  +  +TGGL
Sbjct:  384 KEALQAAVGLPVDRNIPLIGFIGRLEEQKGSDILYAAISKFISMDVQIL---ILGTGKKKFEQQIEQLEVMYPDKARGVAKFNVPLAHMITAGADFMLIPSRFEPCGLIQLHAMRYGTPCICASTGGL 508          
BLAST of EY756697 vs. ExPASy Swiss-Prot
Match: GLGA_MYXXD (Glycogen synthase OS=Myxococcus xanthus (strain DK 1622) GN=glgA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 8.291e-30
Identity = 57/129 (44.19%), Postives = 79/129 (61.24%), Query Frame = 1
Query:   13 CKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFMFQVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL 399
            CK  L    GL   P  P+ GF+ RL  QKG+DL+  A P  L  D++    V +GSG+   E  +   ++ Y  +    +GF+  +SH + AG D  LMPSR+EPCGLNQ+Y++RYGT+P+V ATGGL
Sbjct:  282 CKRELLARFGLEDGP-APVFGFVSRLAWQKGMDLLLEALPAALHADIRV---VGVGSGEGPLEEGLLALQSRYPKQVGVHIGFDPGLSHLVEAGADFFLMPSRYEPCGLNQMYSLRYGTVPIVRATGGL 406          

HSP 2 Score: 43.1282 bits (100), Expect = 8.291e-30
Identity = 22/62 (35.48%), Postives = 35/62 (56.45%), Query Frame = 3
Query:  429 EGSGEGTGWSFSPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 614
            EG  +G G  F    + ++L A+R A+  Y +  S  +   RRGMEKD++W  +  +YE +F
Sbjct:  411 EGGLDGNGILFEAFHKSALLAAIRRALALYAD-PSRLDEFRRRGMEKDFSWGASGRRYEALF 471          
The following BLAST results are available for this feature:
BLAST of EY756697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA2_SYNJA7.705e-3141.55Glycogen synthase 2 OS=Synechococcus sp. (strain J... [more]
GLGA_CLOAB7.707e-3141.35Glycogen synthase OS=Clostridium acetobutylicum GN... [more]
GLGA_KOSOT8.148e-3154.26Glycogen synthase OS=Kosmotoga olearia (strain TBF... [more]
SSG1_SOLTU1.390e-3052.34Granule-bound starch synthase 1, chloroplastic/amy... [more]
GLGA_SYNSC2.213e-3043.85Glycogen synthase OS=Synechococcus sp. (strain CC9... [more]
GLGA_THICR2.214e-3046.96Glycogen synthase OS=Thiomicrospira crunogena (str... [more]
GLGA_HELMI2.884e-3044.62Glycogen synthase OS=Heliobacterium modesticaldum ... [more]
GLGA_STRMU4.891e-3043.61Glycogen synthase OS=Streptococcus mutans GN=glgA ... [more]
SSG1_IPOBA5.282e-3052.34Granule-bound starch synthase 1, chloroplastic/amy... [more]
GLGA_MYXXD8.291e-3044.19Glycogen synthase OS=Myxococcus xanthus (strain DK... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-F07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756697 ID=EY756697; Name=EY756697; organism=Citrus sinensis; type=EST; length=878bp
CCACGCGTCCGGTGCAAGATTGCTTTGCAGAAGGAACTTGGCCTTCCCAT
TCGGCCTGATTGTCCCCTGATTGGATTTATTGGAAGACTGGATCACCAGA
AAGGCATTGACCTGATTCGCTTGGCAGCCCCAGAGATCTTGGCAGACGAT
GTTCAATTTATGTTTCAGGTCATGCTTGGTTCTGGGGATCCTCAATTTGA
GAGCTGGATGAGAGACACAGAGGCAACTTACAAAGACAAGTATCGTGGTT
GGGTTGGATTCAATGTGCCAATTTCTCATAGGATCACTGCTGGATGTGAC
ATACTGTTGATGCCTTCAAGATTTGAGCCATGTGGACTAAATCAATTGTA
TGCAATGAGATACGGAACTATACCAGTAGTTCATGCCACCGGAGGACTTA
GATGGAAAACTTCAATCCATTTGCTCGAGAAGGCAGTGGTGAAGGTACAG
GGTGGTCCTTTTCGCCACTATCAGAAGAAAGCATGTTGACGGCATTAAGA
TTTGCAATACGGACTTACAGAGAACACAAGTCATCTTGGGAAGGATTGAT
GAGGAGAGGCATGGAAAAGGATTACACGTGGGAAAATGCTGCGATACAGT
ATGAACAGGTTTTCGAATGGGCCTCCATTGATCCTCCCTACATTCACTGA
GGTAAACAATAAGAAAGAAGTGAAAAAGAAAAGTAAACTGAAAGATTTAA
GTCTTCATACATAGTGGTGCCGGTCCTGGTAATATCAGCTTGAACATCGC
TTCCAGGAAAAATTATTCTTGTCAAATGCTANGTGGGTATGGGGTTTATA
GGCATTTTGTCTTTTTTTTATTCTTTTGAGCCGCATAGTTACNAATTCCA
CACTGACACGTTGACCNAGTCTTGTTTT
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