EY756696

Overview
NameEY756696
Unique NameEY756696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD23_ORYSJ (Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.993e-17
Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 2
Query:   23 IQFACNFEPFISYLAVTYLDRFISRQE--IPQGKPWVLRLLAVSCISLAAKMKNTHFP--LSKFQGDQKLIFDAQTIHRM 250
            +Q   +F P  +YLAV YLDRF+S  E  +    PW+ +LL V+C+SLAAKM+ T  P  L     + + +FDA+TIHRM
Sbjct:  114 VQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAETIHRM 193          

HSP 2 Score: 43.8986 bits (102), Expect = 1.993e-17
Identity = 46/188 (24.47%), Postives = 78/188 (41.49%), Query Frame = 3
Query:  252 ELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYE-LFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEM--VEMDGCESILDTLSSSRTQFSVVDXQCTKXXXXXXXXXXXXXXXMM---------PEKERNQRRKMNGFCREGDSS 779
            E+++L  L WRM+++TPF+++  F+     +   +T  L  R T+II         L FRP             +    L F     S  S   V+K+++ +C+  +QEM  V  +   S  D+L    T   V+D    +                M          EKE ++RR  +G+ R G+++
Sbjct:  194 EIIVLTTLKWRMQAVTPFTYIGHFLDKIN-EGNRITSELISRCTEIILSTMKATVFLRFRPSEIATAVALSVVADGGRVLDFGGVLES--SKLPVDKDNVGRCHQAMQEMALVMQNSTASPSDSLCYDMTN-PVLDCHILRRRECVSLQSGPRDELEMGWAPFAITVSEKEESERRCDDGWRRGGEAA 377          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD31_ORYSJ (Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 4.398e-17
Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 2
Query:   41 FEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNT--HFPLSKFQGDQKLIFDAQTIHRM 250
            F P  + L+V YLDRF+S  ++PQ +  + +LLAV+ +SLAAKM+ T    PL     D K +F+ +TI RM
Sbjct:  106 FGPLTAVLSVNYLDRFLSVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDAKYVFETRTIKRM 177          

HSP 2 Score: 53.1434 bits (126), Expect = 4.398e-17
Identity = 33/112 (29.46%), Postives = 53/112 (47.32%), Query Frame = 3
Query:  252 ELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEMVEM 587
            EL +L+AL WRM+++T  SF+ +++  F   D P T AL  R+ D+I       + L FRP             E     F    T   +   + KE + +CY+ +Q+ + M
Sbjct:  178 ELAVLNALKWRMQAVTACSFIDYYLHKFNDDDTPSTSAL-SRSVDLILSTCKVAEFLVFRPSEIAASVALVALEEHETSMFERVATCYKN---LKKERVLRCYEMIQDKIIM 285          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD21_ARATH (Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3)

HSP 1 Score: 63.1586 bits (152), Expect = 9.648e-17
Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 2
Query:   62 LAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP--LSKFQGDQKLIFDAQTIHRM 250
            L++ YLDRF++  E+P+ K W  +LLAVSC+SLA+KM+ T  P  +     D K +F+A+TI RM
Sbjct:  120 LSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRM 184          

HSP 2 Score: 45.0542 bits (105), Expect = 9.648e-17
Identity = 22/67 (32.84%), Postives = 38/67 (56.72%), Query Frame = 3
Query:  234 KRFTEWELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRP 434
            K     ELL++  LNWR++++TPFSF+ +F+         +++ L  R++  I      I+ L+FRP
Sbjct:  179 KTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKISGH---VSENLIYRSSRFILNTTKAIEFLDFRP 242          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD31_ARATH (Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3)

HSP 1 Score: 66.2402 bits (160), Expect = 1.253e-16
Identity = 33/72 (45.83%), Postives = 51/72 (70.83%), Query Frame = 2
Query:   41 FEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGDQ-KLIFDAQTIHRM 250
            F    + LA+TYLD+FI    + + KPW+L+L++V+C+SLAAK++ T  P L  FQ ++ K +F+A+TI RM
Sbjct:  103 FSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRM 174          

HSP 2 Score: 41.5874 bits (96), Expect = 1.253e-16
Identity = 28/115 (24.35%), Postives = 50/115 (43.48%), Query Frame = 3
Query:  234 KRFTEWELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQEM 578
            K     ELLIL  L W+M  ITP SF+   I     K+      L ++   ++    S+ + + + P             ++ P    S++T++L    + KE +  CYD + ++
Sbjct:  169 KTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKNNAHWDFL-NKCHRLLLSVISDSRFVGYLPSVVAAATMMRIIEQVDPFDPLSYQTNLLGVLNLTKEKVKTCYDLILQL 282          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD33_ARATH (Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.080e-14
Identity = 31/80 (38.75%), Postives = 50/80 (62.50%), Query Frame = 2
Query:   17 FTIQFACNFEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGDQ-KLIFDAQTIHRM 250
            F ++    F    + LAV Y DRFI+ ++    KPW+ +L A++C+SLAAK++    P L  FQ ++ + +F+A+TI RM
Sbjct:   94 FKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRM 173          

HSP 2 Score: 41.9726 bits (97), Expect = 1.080e-14
Identity = 27/112 (24.11%), Postives = 47/112 (41.96%), Query Frame = 3
Query:  234 KRFTEWELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTV 569
            K     ELL+L  L+WRM  +TP SF    I  +  K     + L  R   ++     + + L F P             +L       +++ +++   V+ E ++KCY+ V
Sbjct:  168 KTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYSFKSHHQLEFL-SRCESLLLSIIPDSRFLSFSPSVLATAIMVSVIRDLKMCDEAVYQSQLMTLLKVDSEKVNKCYELV 278          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD32_ARATH (Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=1 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 6.744e-14
Identity = 27/72 (37.50%), Postives = 44/72 (61.11%), Query Frame = 2
Query:   41 FEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP--LSKFQGDQKLIFDAQTIHRM 250
            F    + LAV Y DRF++  ++   KPW+ +L+AV+ +SLAAK++    P  L     + + +F+A+TI RM
Sbjct:  112 FTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRM 183          

HSP 2 Score: 47.3654 bits (111), Expect = 6.744e-14
Identity = 35/147 (23.81%), Postives = 61/147 (41.50%), Query Frame = 3
Query:  234 KRFTEWELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYELFPLQFPSFKTSILSSDYVNKEDLSKCYDTVQE----------MVEMDGCESILDTLSSSRTQFSV 644
            K     ELLIL  L WRM  +TP SF    I  F  K        + +   ++    ++ + + + P             EL P     +++ I +   VN+E +++CY+ + E          +V+ D    +LD   SS + ++V
Sbjct:  178 KTIQRMELLILSTLQWRMHPVTPISFFDHIIRRFGSKWHQQLDFCR-KCERLLISVIADTRFMRYFPSVLATAIMILVFEELKPCDEVEYQSQITTLLKVNQEKVNECYELLLEHNPSKKRMMNLVDQDSPSGVLDFDDSSNSSWNV 323          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD11_ORYSJ (Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.100e-13
Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 2
Query:   41 FEPFISYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP--LSKFQGDQKLIFDAQTIHRM 250
            F+P  +YLAV+Y+DRF+S + +P    W  +LL V+C+SLAAKM+ +  P  L       + IF+ +TI RM
Sbjct:  141 FQPATAYLAVSYMDRFMSSRSLPD-HGWASQLLCVACLSLAAKMEESSAPPLLDLQIEGTRFIFEPRTIQRM 211          

HSP 2 Score: 38.1206 bits (87), Expect = 7.100e-13
Identity = 22/57 (38.60%), Postives = 33/57 (57.89%), Query Frame = 3
Query:  252 ELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLL 422
            EL++L  L+WR+RS+TPF+F+ FF           ++ L  RA  II  A  E++ L
Sbjct:  212 ELIVLVELDWRLRSVTPFAFVDFFACKVGSSGRS-SRILALRACQIILSAIHELEFL 267          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD53_ORYSJ (Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 7.468e-12
Identity = 29/66 (43.94%), Postives = 48/66 (72.73%), Query Frame = 2
Query:   56 SYLAVTYLDRFISRQEIPQGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGDQKLIFDAQTIHRM 250
            +Y+AVTYLDRF++R+ + + K W L+LL+V+C+SLAAK++    P L +F+ D   ++D  ++ RM
Sbjct:  121 AYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSLAAKVEERRPPRLPEFKLD---MYDCASLMRM 183          

HSP 2 Score: 35.4242 bits (80), Expect = 7.468e-12
Identity = 21/61 (34.43%), Postives = 34/61 (55.74%), Query Frame = 3
Query:  252 ELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALKDRATDIIFRAHSEIKLLEFRP 434
            ELL+L  L W+M + TPFS+L  F + F   +    +A+  RA + IF +   I  + ++P
Sbjct:  184 ELLVLTTLKWQMITETPFSYLNCFTAKFRHDE---RKAIVLRAIECIFASIKVISSVGYQP 241          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD51_ORYSJ (Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2)

HSP 1 Score: 53.5286 bits (127), Expect = 9.677e-12
Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 2
Query:   56 SYLAVTYLDRFISRQEIPQG-KPWVLRLLAVSCISLAAKMKNTHFP-LSKFQ---GDQKLIFDAQTIHRM 250
            +YLA+ Y DRF  R+ I +   PW  RLLAV+C+SLAAKM+    P LS+F+   GD    F    I RM
Sbjct:  130 AYLAIAYFDRFCLRRCIDRSVMPWAARLLAVACVSLAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRM 199          

HSP 2 Score: 37.7354 bits (86), Expect = 9.677e-12
Identity = 30/116 (25.86%), Postives = 48/116 (41.38%), Query Frame = 3
Query:  252 ELLILDALNWRMRSITPFSFLCFFISLFEPKDPPLTQALK---------DRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXYELFPLQFPSFKTSILSSDY-VNKEDLSKCYDTV 569
            ELL+L  L+WRM ++TPF +L           P L+  L+           +  +IF A     +L+ RP            +     +    K S LS  + ++KED+  CY  +
Sbjct:  200 ELLVLSTLDWRMAAVTPFDYL-----------PCLSSRLRRHVGGGGGAGASAALIFSAAEAASVLDHRPSTVAAAAVLAATHGALTREALESKMSGLSPSFLLDKEDVFACYSAM 304          
BLAST of EY756696 vs. ExPASy Swiss-Prot
Match: CCD52_ORYSJ (Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 3.569e-11
Identity = 27/67 (40.30%), Postives = 42/67 (62.69%), Query Frame = 2
Query:   56 SYLAVTYLDRFISRQEIP-QGKPWVLRLLAVSCISLAAKMKNTHFP-LSKFQGDQKLIFDAQTIHRM 250
            +YLA+ Y DRF  R+ +  +  PW  RLL+++C+S+AAKM+    P LS+F      +F + +I RM
Sbjct:  121 AYLAIAYFDRFCLRRRVDREAMPWAARLLSIACVSVAAKMEEYQSPALSEFDAGGGRVFCSDSIRRM 187          

HSP 2 Score: 35.039 bits (79), Expect = 3.569e-11
Identity = 31/115 (26.96%), Postives = 45/115 (39.13%), Query Frame = 3
Query:  252 ELLILDALNWRMRSITPFSFL-CFFISLFEPKDPPLTQA---------LKDRATDIIFRAHSEIKLLEFRPXXXXXXXXXXXXY--ELFPLQFPSFKTSILSSDYVNKEDLSKCY 560
            ELL+L  L WRM ++TPF FL CF   L          A         +   A   IF       +L++RP            Y   L      S  +++  S  ++KE++  CY
Sbjct:  188 ELLVLSTLGWRMGAVTPFDFLPCFSSRLHRHHHGGAGAAGHGAAAAARVALNAVGFIFATAEAGSVLDYRPSTVAAAAILAASYGAPLTKEALESKMSNLSPSCLIDKENVHACY 302          
The following BLAST results are available for this feature:
BLAST of EY756696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
CCD23_ORYSJ1.993e-1746.25Putative cyclin-D2-3 OS=Oryza sativa subsp. japoni... [more]
CCD31_ORYSJ4.398e-1744.44Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD21_ARATH9.648e-1747.69Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=... [more]
CCD31_ARATH1.253e-1645.83Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=... [more]
CCD33_ARATH1.080e-1438.75Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=... [more]
CCD32_ARATH6.744e-1437.50Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=... [more]
CCD11_ORYSJ7.100e-1343.06Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD53_ORYSJ7.468e-1243.94Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD51_ORYSJ9.677e-1247.14Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYC... [more]
CCD52_ORYSJ3.569e-1140.30Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYC... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-F06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756696 ID=EY756696; Name=EY756696; organism=Citrus sinensis; type=EST; length=890bp
CCACGCGTCCGCTCATTTTACGATACAATTTGCCTGCAATTTTGAGCCCT
TCATTTCCTACCTAGCTGTTACTTACTTGGACCGGTTCATCTCTCGGCAA
GAAATTCCGCAAGGAAAGCCATGGGTTCTAAGGCTTCTTGCGGTATCTTG
CATTTCTCTAGCTGCAAAGATGAAGAACACCCACTTCCCCCTCTCTAAGT
TCCAGGGTGACCAAAAGCTCATCTTCGATGCACAAACGATTCACCGAATG
GGAGCTTCTCATTCTTGATGCATTAAATTGGAGAATGAGATCAATAACAC
CTTTCTCATTTCTCTGTTTCTTTATTTCTCTATTTGAGCCGAAAGATCCT
CCATTGACACAAGCTCTCAAAGATCGAGCTACAGATATCATCTTCAGAGC
TCATAGTGAAATCAAGTTACTAGAGTTCAGGCCATCAGTAATTGCGGCAT
CAGCAGTTCTTCTGTCATCATATGAACTGTTCCCATTGCAGTTCCCTTCT
TTCAAGACTTCAATTTTAAGTAGTGACTATGTAAATAAAGAGGACCTGTC
AAAATGCTATGATACAGTGCAAGAAATGGTGGAAATGGACGGCTGTGAGT
CCATTTTAGATACACTGTCAAGCTCAAGAACTCAATTTAGTGTGGTGGAT
TANCAATGCACGAAATCAGAAAGCCAACAAATCACGAATAGTAGCATCAC
AACTACCACTATGATGCCAGAAAAGGAGAGAAATCAGCGACGCAAAATGA
ATGGGTTTTGCAGGGAAGGCGATTCCAGCTTTCTCGATTCAAAATTGTTG
AATACCTGAAAGACAATGAAATGGGCCGAATTGCACCACACATGGCAACG
TCTAAAGAAAAAGGAAAAAAAAGGGACCGATGGCCCCGAT
back to top