EY728590

Overview
NameEY728590
Unique NameEY728590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS5_ARATH (3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.348e-28
Identity = 55/108 (50.93%), Postives = 74/108 (68.52%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP--NVWKDCIDRYP 428
            + K   EHFC+H GGRAVID   K L+L    +E +RM LHRFGNTS+  LWY L Y+EA+ R+K+ DR+  I+ G+GFKCN+ VW+  + ++ P    W DCI+RYP
Sbjct:  376 DFKQAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRMTLHRFGNTSSSSLWYELSYIEAQGRMKRNDRVWQIAFGSGFKCNSAVWKCNRTIKTPTDGAWSDCIERYP 483          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.348e-28
Identity = 55/112 (49.11%), Postives = 75/112 (66.96%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP----NVWKDCIDRYPPK 434
            + K   EHFC+H GGRAV+D   K L+L ++ +EP+RM LHRFGNTS+  LWY + Y EAK R+K GDR+  I+ G+GFKCN+ VW+ ++ +       N W   ID+YP K
Sbjct:  414 DFKLAFEHFCIHAGGRAVLDEVQKNLDLKDWHMEPSRMTLHRFGNTSSSSLWYEMAYTEAKGRVKAGDRLWQIAFGSGFKCNSAVWKALRPVSTEEMTGNAWAGSIDQYPVK 525          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS2_ARATH (Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.231e-28
Identity = 55/110 (50.00%), Postives = 76/110 (69.09%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP--NVWKDCIDRYPPK 434
            + K  ++HFC+H GGRAVID   K L+L    +E +RM LHRFGNTS+  +WY L Y EAK R++KG+R+  I+ G+GFKCN+ VW  ++++E    N W+ CI RYP K
Sbjct:  375 DFKLALDHFCIHAGGRAVIDELEKSLKLSPKHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGNRVWQIAFGSGFKCNSAVWVALRNVEPSVNNPWEHCIHRYPVK 484          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS18_ARATH (3-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana GN=FAE1 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.832e-28
Identity = 55/110 (50.00%), Postives = 77/110 (70.00%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP--NVWKDCIDRYPPK 434
            + K  ++HFC+H GGRAVID   K L L   D+E +R  LHRFGNTS+  +WY L Y+EAK R+KKG++   I+LG+GFKCN+ VW  +++++    + W+ CIDRYP K
Sbjct:  380 DFKLAVDHFCIHAGGRAVIDELEKNLGLSPIDVEASRSTLHRFGNTSSSSIWYELAYIEAKGRMKKGNKAWQIALGSGFKCNSAVWVALRNVKASANSPWQHCIDRYPVK 489          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS16_ARATH (3-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana GN=KCS16 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.832e-28
Identity = 55/108 (50.93%), Postives = 74/108 (68.52%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP--NVWKDCIDRYP 428
            + K   EHFC+H GGRA+ID   K L L   D+E +RM LHRFGNTS+  +WY L Y EAK R+ KGDRI  I+LG+GFKCN+ VW  +++++    N W+ C+ +YP
Sbjct:  377 DFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMTKGDRIWQIALGSGFKCNSSVWVALRNVKPSTNNPWEQCLHKYP 484          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.832e-28
Identity = 56/109 (51.38%), Postives = 75/109 (68.81%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDL---EDPNVWKDCIDRYP 428
            + K   EHFC+H GGRAV+D   K L+L E+ +EP+RM L+RFGNTS+  LWY L Y EAK R+KKGDRI  I+ G+GFKCN+ VW  ++ +   ++ N W D I  +P
Sbjct:  392 DFKLAFEHFCIHAGGRAVLDELEKNLKLTEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRIWQIAFGSGFKCNSSVWRAVRSVNPKKEKNPWMDEIHEFP 500          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS19_ARATH (3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.923e-28
Identity = 56/110 (50.91%), Postives = 75/110 (68.18%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDL----EDPNVWKDCIDRYP 428
            + K   EHFC+H GGRAV+D   K L+L E+ +EP+RM L+RFGNTS+  LWY L Y EAK R+K+GDR   I+ G+GFKCN+ VW+ ++ +    E  N W D ID +P
Sbjct:  408 DFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALRTIDPMDEKTNPWIDEIDDFP 517          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS10_ARATH (3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 8.923e-28
Identity = 53/107 (49.53%), Postives = 74/107 (69.16%), Query Frame = 3
Query:  117 KAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP---NVWKDCIDRYP 428
            K   EHFC H   + V++   K L L E ++E +RM LHRFGNTS+ G+WY L YMEAK+ +++GDR+  I+ G+GFKCN+ VW+ M+ ++ P   N W DCI+RYP
Sbjct:  441 KLAFEHFCFHAASKVVLEELQKNLGLSEENMEASRMTLHRFGNTSSSGIWYELAYMEAKESVRRGDRVWQIAFGSGFKCNSVVWKAMRKVKKPTRNNPWVDCINRYP 547          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.198e-26
Identity = 54/113 (47.79%), Postives = 73/113 (64.60%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLE-------DPNVWKDCIDRYP 428
            + K   EHFC+H GGRAV+D   K L+L E+ +EP+RM L+RFGNTS+  LWY L Y EAK R+K+GDR   I+ G+GFKCN+ VW  ++ ++         N W D I  +P
Sbjct:  400 DFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWRALRTIDPSKEKKKKTNPWIDEIHEFP 512          
BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS7_ARATH (3-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana GN=KCS7 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.749e-26
Identity = 52/108 (48.15%), Postives = 73/108 (67.59%), Query Frame = 3
Query:  111 NLKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLED--PNVWKDCIDRYP 428
            N K   EHFC+H GGRA+I+G  K L+LD+ D+E +R  L+R+GNTS+  LWY L Y+EAK R+K GD++  I  G+GFK N+ VW+ + +++    N W D I  YP
Sbjct:  338 NFKKAFEHFCIHAGGRAIIEGVEKHLKLDKEDVEASRSTLYRYGNTSSSSLWYELQYLEAKGRMKMGDKVWQIGFGSGFKANSAVWKCISEIDSRGRNAWSDRIHLYP 445          
The following BLAST results are available for this feature:
BLAST of EY728590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS5_ARATH2.348e-2850.933-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana ... [more]
KCS1_ARATH2.348e-2849.113-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana ... [more]
KCS2_ARATH5.231e-2850.00Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis ... [more]
KCS18_ARATH6.832e-2850.003-ketoacyl-CoA synthase 18 OS=Arabidopsis thaliana... [more]
KCS16_ARATH6.832e-2850.933-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana... [more]
KCS11_ARATH6.832e-2851.383-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana... [more]
KCS19_ARATH8.923e-2850.913-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana... [more]
KCS10_ARATH8.923e-2849.533-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana... [more]
KCS17_ARATH2.198e-2647.793-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana... [more]
KCS7_ARATH3.749e-2648.153-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-H07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728590 ID=EY728590; Name=EY728590; organism=Citrus sinensis; type=EST; length=774bp
CACGCGTCCGCGGACGCGTGGGTCGGTATGTAATCCAATCCTATTATGAA
AACAGAATCAGAAAAAGCACTTCTAGTACTAAACCTGAAGCAGTACTCGG
AGCAGGGTTGAACCTGAAAGCTGGAATTGAGCATTTCTGCTTACATCCTG
GAGGAAGAGCTGTGATTGATGGGACTGGAAAGGGCTTGGAATTGGATGAA
TACGATCTTGAGCCAGCAAGAATGGCGCTTCATCGATTCGGAAACACATC
AGCCGGTGGCCTGTGGTATGTTTTAGGCTACATGGAAGCTAAAAAGAGAC
TTAAAAAAGGTGACAGAATCCTGATGATTAGCCTTGGAGCTGGTTTTAAA
TGCAACAACTGTGTCTGGGAAGTTATGAAAGACCTGGAGGATCCTAATGT
TTGGAAAGATTGCATTGACCGGTACCCTCCGAAATCGCTTGCAAATCCTT
TCCAGGAGAGGTATAGCTGGCTCAATGATGAGTATTTGAGCTTCGTTAGG
CTTTAATTCAAAAAAAAAAAAAAAAGGTTAAAAGTTTTTTAAAGAAGCTT
CAAGTTCTGTATCTGCTTCTTCTGTTCTGTTTTGATGTTAAGTTTAAGTA
AGAGATGCTGCAAATGTATTTTATCGAATCGTACGTACTCTGATTCCTGC
ATTTACTGCTACAATAAAGTTGTAGTACCTCAATGGTAAGTTATTAATGC
ATGGGAGATCTCATGTATTTGTAACTATTATTAGATTTATCCATGAATTA
TATATTGATTTTGAATTATAANNN
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