EY728590

Overview
NameEY728590
Unique NameEY728590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728590 vs. ExPASy Swiss-Prot
Match: KCS15_ARATH (3-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana GN=KCS15 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.944e-20
Identity = 42/100 (42.00%), Postives = 64/100 (64.00%), Query Frame = 3 
Query:  114 LKAGIEHFCLHPGGRAVIDGTGKGLELDEYDLEPARMALHRFGNTSAGGLWYVLGYMEAKKRLKKGDRILMISLGAGFKCNNCVWEVMKDLEDP---NVW 404
            L+   EH C+    + V+D   K L+L E ++E +R  L RFGNTS+  +WY L Y+E K ++K+GDR+  I  G+GFKCN+ VW+ +K+++ P   N W
Sbjct:  350 LEPSFEHICVLASSKKVLDDIHKDLKLTEENMEASRRTLERFGNTSSSSIWYELAYLEHKAKMKRGDRVWQIGFGSGFKCNSVVWKALKNIDPPRHNNPW 449
The following BLAST results are available for this feature:
BLAST of EY728590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS15_ARATH8.944e-2042.003-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-H07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728590 ID=EY728590; Name=EY728590; organism=Citrus sinensis; type=EST; length=774bp
CACGCGTCCGCGGACGCGTGGGTCGGTATGTAATCCAATCCTATTATGAA
AACAGAATCAGAAAAAGCACTTCTAGTACTAAACCTGAAGCAGTACTCGG
AGCAGGGTTGAACCTGAAAGCTGGAATTGAGCATTTCTGCTTACATCCTG
GAGGAAGAGCTGTGATTGATGGGACTGGAAAGGGCTTGGAATTGGATGAA
TACGATCTTGAGCCAGCAAGAATGGCGCTTCATCGATTCGGAAACACATC
AGCCGGTGGCCTGTGGTATGTTTTAGGCTACATGGAAGCTAAAAAGAGAC
TTAAAAAAGGTGACAGAATCCTGATGATTAGCCTTGGAGCTGGTTTTAAA
TGCAACAACTGTGTCTGGGAAGTTATGAAAGACCTGGAGGATCCTAATGT
TTGGAAAGATTGCATTGACCGGTACCCTCCGAAATCGCTTGCAAATCCTT
TCCAGGAGAGGTATAGCTGGCTCAATGATGAGTATTTGAGCTTCGTTAGG
CTTTAATTCAAAAAAAAAAAAAAAAGGTTAAAAGTTTTTTAAAGAAGCTT
CAAGTTCTGTATCTGCTTCTTCTGTTCTGTTTTGATGTTAAGTTTAAGTA
AGAGATGCTGCAAATGTATTTTATCGAATCGTACGTACTCTGATTCCTGC
ATTTACTGCTACAATAAAGTTGTAGTACCTCAATGGTAAGTTATTAATGC
ATGGGAGATCTCATGTATTTGTAACTATTATTAGATTTATCCATGAATTA
TATATTGATTTTGAATTATAANNN
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