EY756676

Overview
NameEY756676
Unique NameEY756676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H3_MORAP (Histone H3 OS=Mortierella alpina GN=H3.1 PE=3 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 8.428e-23
Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 3
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 209
            EI+QDFKTDLRFQSSA+ ALQE +EAYLV LFEDTNL AIHAKRVTI PKDI LARR+RGER
Sbjct:   74 EIAQDFKTDLRFQSSAIGALQEASEAYLVSLFEDTNLAAIHAKRVTIQPKDIHLARRLRGER 135          
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H3_TRIRE (Histone H3 OS=Trichoderma reesei GN=HHT1 PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 1.438e-22
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 3
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 209
            EI+QDFK+DLRFQSSA+ ALQE  E+YLV LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:   74 EIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135          
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H3_NEUCR (Histone H3 OS=Neurospora crassa GN=hh3 PE=1 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 1.438e-22
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 3
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 209
            EI+QDFK+DLRFQSSA+ ALQE  E+YLV LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:   74 EIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135          
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H3_MARPO (Histone H3 OS=Marchantia polymorpha PE=3 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 1.438e-22
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 3
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 209
            EI+QDFK+DLRFQSSA+ ALQE  E+YLV LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:   74 EIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135          
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H3_MAGGR (Histone H3 OS=Magnaporthe grisea GN=HHT1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.438e-22
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 3
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 209
            EI+QDFK+DLRFQSSA+ ALQE  E+YLV LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:   74 EIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135          
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H3_GIBZE (Histone H3 OS=Gibberella zeae GN=HHT1 PE=3 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 1.438e-22
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 3
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 209
            EI+QDFK+DLRFQSSA+ ALQE  E+YLV LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:   74 EIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135          
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H3_CHAGB (Histone H3 OS=Chaetomium globosum GN=HHT1 PE=2 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 1.438e-22
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 3
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 209
            EI+QDFK+DLRFQSSA+ ALQE  E+YLV LFEDTNLCAIHAKRVTI  KDIQLARR+RGER
Sbjct:   74 EIAQDFKSDLRFQSSAIGALQESVESYLVSLFEDTNLCAIHAKRVTIQSKDIQLARRLRGER 135          
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H33L3_CAEEL (Putative histone H3.3-like type 3 OS=Caenorhabditis elegans GN=his-69 PE=5 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.877e-22
Identity = 51/62 (82.26%), Postives = 57/62 (91.94%), Query Frame = 3
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 209
            EI+QD K DLRFQS+A+ ALQE +E +LVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGER
Sbjct:   65 EIAQDVKQDLRFQSAAIQALQEASEYFLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGER 126          
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H3_YARLI (Histone H3 OS=Yarrowia lipolytica GN=HHT1 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.203e-22
Identity = 51/61 (83.61%), Postives = 54/61 (88.52%), Query Frame = 3
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 206
            EI+QDFKTDLRFQSSA+ ALQE  EAYLV LFEDTNLCAIHAKRVTI  KDI LARR+RGE
Sbjct:   79 EIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQKKDIHLARRLRGE 139          
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H3_GUITH (Histone H3 OS=Guillardia theta PE=3 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 3.203e-22
Identity = 50/61 (81.97%), Postives = 57/61 (93.44%), Query Frame = 3
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 206
            E++QD+K+DLRFQ+SAV ALQE +E+YLV LFEDTNLCAIHAKRVTIMPKDI LARRIRGE
Sbjct:   73 ELAQDYKSDLRFQNSAVLALQEASESYLVNLFEDTNLCAIHAKRVTIMPKDIYLARRIRGE 133          
The following BLAST results are available for this feature:
BLAST of EY756676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
H3_MORAP8.428e-2383.87Histone H3 OS=Mortierella alpina GN=H3.1 PE=3 SV=3[more]
H3_TRIRE1.438e-2282.26Histone H3 OS=Trichoderma reesei GN=HHT1 PE=3 SV=2[more]
H3_NEUCR1.438e-2282.26Histone H3 OS=Neurospora crassa GN=hh3 PE=1 SV=3[more]
H3_MARPO1.438e-2282.26Histone H3 OS=Marchantia polymorpha PE=3 SV=3[more]
H3_MAGGR1.438e-2282.26Histone H3 OS=Magnaporthe grisea GN=HHT1 PE=3 SV=1[more]
H3_GIBZE1.438e-2282.26Histone H3 OS=Gibberella zeae GN=HHT1 PE=3 SV=3[more]
H3_CHAGB1.438e-2282.26Histone H3 OS=Chaetomium globosum GN=HHT1 PE=2 SV=... [more]
H33L3_CAEEL1.877e-2282.26Putative histone H3.3-like type 3 OS=Caenorhabditi... [more]
H3_YARLI3.203e-2283.61Histone H3 OS=Yarrowia lipolytica GN=HHT1 PE=3 SV=... [more]
H3_GUITH3.203e-2281.97Histone H3 OS=Guillardia theta PE=3 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-D07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756676 ID=EY756676; Name=EY756676; organism=Citrus sinensis; type=EST; length=400bp
TTCGGAAGACCCACGCGTCCGGAGAAATCTCTCAAGATTTTAAGACCGAT
CTGAGGTTCCAGAGCAGCGCCGTTGCGGCTCTTCAAGAACCTGCTGAGGC
TTATCTTGTGGGTCTCTTTGAAGATACCAATCTCTGCGCCATTCATGCTA
AGAGGGTCACTATCATGCCCAAAGATATTCAGCTTGCTAGGAGGATCAGA
GGAGAGAGAGCTTAGTCGATTAATTGATTTGTATCTAGATCTGATTTGGC
TTTTAGCGTTTCAGTTTCTAAGAAATGGGTATGCAAGATTGTTTTGGAAT
GTAATGGAAAGTTTGAATCTATTGTTAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
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