EY756676

Overview
NameEY756676
Unique NameEY756676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H33_ORYSJ (Histone H3.3 OS=Oryza sativa subsp. japonica GN=H3 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.656e-26
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 3 
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 212
            EI+QDFKTDLRFQS AV ALQE AEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   74 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H33_ORYSI (Histone H3.3 OS=Oryza sativa subsp. indica GN=OsI_011536 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.656e-26
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 3 
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 212
            EI+QDFKTDLRFQS AV ALQE AEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   74 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H33_ORYCO (Histone H3.3 OS=Oryza coarctata PE=2 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 3.656e-26
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 3 
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 212
            EI+QDFKTDLRFQS AV ALQE AEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   74 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H33_MEDSA (Histone H3.3 OS=Medicago sativa PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.656e-26
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 3 
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 212
            EI+QDFKTDLRFQS AV ALQE AEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   74 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H33_LOLTE (Histone H3.3 OS=Lolium temulentum PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.656e-26
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 3 
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 212
            EI+QDFKTDLRFQS AV ALQE AEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   74 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H33_LOLMU (Histone H3.3 OS=Lolium multiflorum GN=RH3 PE=2 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 3.656e-26
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 3 
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 212
            EI+QDFKTDLRFQS AV ALQE AEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   74 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H33_HORVU (Histone H3.3 (Fragment) OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.656e-26
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 3 
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 212
            EI+QDFKTDLRFQS AV ALQE AEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   18 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 80
[Close]
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H33_GOSHI (Histone H3.3 OS=Gossypium hirsutum GN=HIS3 PE=2 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 3.656e-26
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 3 
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 212
            EI+QDFKTDLRFQS AV ALQE AEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   74 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H33_CAPAN (Histone H3.3 OS=Capsicum annuum PE=2 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 3.656e-26
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 3 
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 212
            EI+QDFKTDLRFQS AV ALQE AEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   74 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of EY756676 vs. ExPASy Swiss-Prot
Match: H33_ARATH (Histone H3.3 OS=Arabidopsis thaliana GN=HTR4 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.656e-26
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 3 
Query:   24 EISQDFKTDLRFQSSAVAALQEPAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 212
            EI+QDFKTDLRFQS AV ALQE AEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:   74 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
The following BLAST results are available for this feature:
BLAST of EY756676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
H33_ORYSJ3.656e-2693.65Histone H3.3 OS=Oryza sativa subsp. japonica GN=H3... [more]
H33_ORYSI3.656e-2693.65Histone H3.3 OS=Oryza sativa subsp. indica GN=OsI_... [more]
H33_ORYCO3.656e-2693.65Histone H3.3 OS=Oryza coarctata PE=2 SV=3[more]
H33_MEDSA3.656e-2693.65Histone H3.3 OS=Medicago sativa PE=1 SV=2[more]
H33_LOLTE3.656e-2693.65Histone H3.3 OS=Lolium temulentum PE=2 SV=2[more]
H33_LOLMU3.656e-2693.65Histone H3.3 OS=Lolium multiflorum GN=RH3 PE=2 SV=... [more]
H33_HORVU3.656e-2693.65Histone H3.3 (Fragment) OS=Hordeum vulgare PE=3 SV... [more]
H33_GOSHI3.656e-2693.65Histone H3.3 OS=Gossypium hirsutum GN=HIS3 PE=2 SV... [more]
H33_CAPAN3.656e-2693.65Histone H3.3 OS=Capsicum annuum PE=2 SV=3[more]
H33_ARATH3.656e-2693.65Histone H3.3 OS=Arabidopsis thaliana GN=HTR4 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-D07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756676 ID=EY756676; Name=EY756676; organism=Citrus sinensis; type=EST; length=400bp
TTCGGAAGACCCACGCGTCCGGAGAAATCTCTCAAGATTTTAAGACCGAT
CTGAGGTTCCAGAGCAGCGCCGTTGCGGCTCTTCAAGAACCTGCTGAGGC
TTATCTTGTGGGTCTCTTTGAAGATACCAATCTCTGCGCCATTCATGCTA
AGAGGGTCACTATCATGCCCAAAGATATTCAGCTTGCTAGGAGGATCAGA
GGAGAGAGAGCTTAGTCGATTAATTGATTTGTATCTAGATCTGATTTGGC
TTTTAGCGTTTCAGTTTCTAAGAAATGGGTATGCAAGATTGTTTTGGAAT
GTAATGGAAAGTTTGAATCTATTGTTAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
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