EY756675
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: CENPA_CHICK (Histone H3-like centromeric protein A OS=Gallus gallus GN=CENPA PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.322e-22 Identity = 55/91 (60.44%), Postives = 69/91 (75.82%), Query Frame = 2 Query: 158 KPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424 + RYRPG ALREIR+YQ ST LL+R+ PF R+VREI F D R+Q+ A+LALQEAAEA+LV L ED LC++HA+RVT+ PKD+Q Sbjct: 28 RARRYRPGQRALREIRRYQSSTALLLRRQPFARVVREICLLFTRGVDYRWQAMALLALQEAAEAFLVHLLEDAYLCSLHARRVTLYPKDLQ 118
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: HCP3_CAEEL (Histone H3-like centromeric protein hcp-3 OS=Caenorhabditis elegans GN=hcp-3 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22 Identity = 57/94 (60.64%), Postives = 68/94 (72.34%), Query Frame = 2 Query: 152 VKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ---DFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424 V K RYRPG AL EIRKYQK+ +LLI+K PF RLVREI Q F D R +S A+ ALQEAAEA+LV +FE ++L + HAKRVT+M DIQ Sbjct: 185 VTKTRRYRPGQKALEEIRKYQKTEDLLIQKAPFARLVREIMQTSTPFGADCRIRSDAISALQEAAEAFLVEMFEGSSLISTHAKRVTLMTTDIQ 278
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: CENPA_CRIGR (Histone H3-like centromeric protein A OS=Cricetulus griseus GN=CENPA PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.353e-21 Identity = 61/116 (52.59%), Postives = 78/116 (67.24%), Query Frame = 2 Query: 95 PRKQLATKAARKSAPTTGGVKKPHRYRPGT----VALREIRKYQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424 PR++ T R S+P G ++ R PG + L+EI+K Q+ST+LL+RKLPF R+VREI F DL +Q+ A+LALQEAAEA+LV LFED L +HA RVTI PKDIQ Sbjct: 3 PRRKPRTPRRRPSSPVPGPSRRSSR--PGKRRKFLWLKEIKKLQRSTDLLLRKLPFSRVVREICGKFTRGVDLCWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTIFPKDIQ 116
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: HTR12_ARATH (Histone H3-like centromeric protein HTR12 OS=Arabidopsis thaliana GN=HTR12 PE=2 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 7.470e-21 Identity = 61/125 (48.80%), Postives = 79/125 (63.20%), Query Frame = 2 Query: 56 TKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDL--RFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424 T+QT ++ R+ K +R++ P G KK +RYRPGTVAL+EIR +QK T LLI F R VR I R+ + A++ALQEAAE YLVGLF D+ LCAIHA+RVT+M KD + Sbjct: 45 TQQTNPTTSPATGTRR--GAKRSRQAMPR-GSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPPQINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFE 166
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: CENPA_HUMAN (Histone H3-like centromeric protein A OS=Homo sapiens GN=CENPA PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.470e-21 Identity = 63/125 (50.40%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 71 RKSTGGKAPRKQ----LATKAARKSAPTTGGVKKPH-RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424 R+S +APR++ T + P+ G H R R G L+EIRK QKST LLIRKLPF RL REI F D +Q+ A+LALQEAAEA+LV LFED L +HA RVT+ PKD+Q Sbjct: 5 RRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQ 127
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: CENPA_BOVIN (Histone H3-like centromeric protein A OS=Bos taurus GN=CENPA PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 1.079e-19 Identity = 60/126 (47.62%), Postives = 76/126 (60.32%), Query Frame = 2 Query: 53 RTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424 R +T R+ AP AA + P+ G +P R TV L+EIR QK+T LL+RK PF RL REI F D +Q+ A+LALQEAAEA+LV LFED L ++HA RVT+ PKD+Q Sbjct: 8 RKPETPRRRPASPAP-------AAPRPTPSLGTSSRPLARRRHTV-LKEIRTLQKTTHLLLRKSPFCRLAREICVQFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLSLHAGRVTLFPKDVQ 125
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: HCP3L_CAEBR (Histone H3-like centromeric protein cpar-1 OS=Caenorhabditis briggsae GN=cpar-1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.409e-19 Identity = 55/96 (57.29%), Postives = 71/96 (73.96%), Query Frame = 2 Query: 152 VKKPH--RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIA--QDFKT-DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424 V K H ++RPG AL EIRKYQKST++LI+K PF RLV EI Q +K+ D R ++ A++ALQEAAEA++V +FE + L HAKRVT+MP DIQ Sbjct: 239 VTKTHNRKFRPGQKALAEIRKYQKSTDMLIQKAPFVRLVHEIIREQTYKSQDYRIRADALMALQEAAEAFMVEMFEGSVLICNHAKRVTLMPTDIQ 334
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: HCP3L_CAEEL (Histone H3-like centromeric protein cpar-1 OS=Caenorhabditis elegans GN=cpar-1 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.840e-19 Identity = 51/94 (54.26%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 152 VKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ---DFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424 + K RYRPG AL EIRKYQ+S +LLI K PF RLVREI Q F +DLR +S A+ ALQEA+EA LV +F+ ++L + H+KR T+ D+Q Sbjct: 158 ISKTRRYRPGQKALEEIRKYQESEDLLIPKAPFARLVREIMQTSTPFSSDLRIRSDAINALQEASEALLVQMFDGSSLISAHSKRATLTTTDVQ 251
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: CENPA_TETTH (Histone H3-like centromeric protein CNA1 OS=Tetrahymena thermophila GN=CNA1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.139e-19 Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = 2 Query: 98 RKQLATKAARKSAPT---TGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD--LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDI 421 R + +TK R+S+ + K R+RPG AL+++R+Y ++ LLIRKLPFQRL+REI+ + LR+ S A++ LQ E Y+V FED N CA+HAKRVT+M KD+ Sbjct: 54 RNKASTKKKRESSGEKYESARDKVIRRFRPGDNALKQLRQYNQTPSLLIRKLPFQRLIREISTRMTEEDSLRWTSFALVLLQTVVEDYMVSFFEDANACALHAKRVTLMSKDL 166
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: CENPA_MOUSE (Histone H3-like centromeric protein A OS=Mus musculus GN=Cenpa PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.558e-18 Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 2 Query: 95 PRKQLATKAARKSAPTTGGVKKPH-------RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424 PR++ T R S+P G ++ R R + L+EI+ QKST+LL RK PF +VREI + F D +Q+ A+LALQEAAEA+L+ LFED L ++HA RVT+ PKDIQ Sbjct: 3 PRRKPQTPRRRPSSPAPGPSRQSSSVGSQTLRRRQKFMWLKEIKTLQKSTDLLFRKKPFSMVVREICEKFSRGVDFWWQAQALLALQEAAEAFLIHLFEDAYLLSLHAGRVTLFPKDIQ 121 The following BLAST results are available for this feature:
BLAST of EY756675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756675 ID=EY756675; Name=EY756675; organism=Citrus sinensis; type=EST; length=865bpback to top |