EY756675

Overview
NameEY756675
Unique NameEY756675
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: H32_XENLA (Histone H3.2 OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.758e-62
Identity = 121/126 (96.03%), Postives = 124/126 (98.41%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: H32_PORAF (Histone H3.2 OS=Poroderma africanus PE=1 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.758e-62
Identity = 121/126 (96.03%), Postives = 124/126 (98.41%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: H32_ONCMY (Histone H3.2 OS=Oncorhynchus mykiss PE=1 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.758e-62
Identity = 121/126 (96.03%), Postives = 124/126 (98.41%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: H32_MUSPA (Histone H3.2 OS=Mus pahari GN=H312 PE=2 SV=3)

HSP 1 Score: 239.58 bits (610), Expect = 1.758e-62
Identity = 121/126 (96.03%), Postives = 124/126 (98.41%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: H32_MOUSE (Histone H3.2 OS=Mus musculus GN=Hist1h3b PE=1 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.758e-62
Identity = 121/126 (96.03%), Postives = 124/126 (98.41%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: H32_ICTBU (Histone H3.2 OS=Ictiobus bubalus PE=1 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.758e-62
Identity = 121/126 (96.03%), Postives = 124/126 (98.41%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: H32_HUMAN (Histone H3.2 OS=Homo sapiens GN=HIST2H3A PE=1 SV=3)

HSP 1 Score: 239.58 bits (610), Expect = 1.758e-62
Identity = 121/126 (96.03%), Postives = 124/126 (98.41%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: H32_DANRE (Histone H3.2 OS=Danio rerio GN=zgc:113984 PE=2 SV=3)

HSP 1 Score: 239.58 bits (610), Expect = 1.758e-62
Identity = 121/126 (96.03%), Postives = 124/126 (98.41%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: H32_CHICK (Histone H3.2 OS=Gallus gallus GN=H3-I PE=1 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.758e-62
Identity = 121/126 (96.03%), Postives = 124/126 (98.41%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY756675 vs. ExPASy Swiss-Prot
Match: H32_CAIMO (Histone H3.2 OS=Cairina moschata PE=2 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.758e-62
Identity = 121/126 (96.03%), Postives = 124/126 (98.41%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 424
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
The following BLAST results are available for this feature:
BLAST of EY756675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H32_XENLA1.758e-6296.03Histone H3.2 OS=Xenopus laevis PE=1 SV=2[more]
H32_PORAF1.758e-6296.03Histone H3.2 OS=Poroderma africanus PE=1 SV=2[more]
H32_ONCMY1.758e-6296.03Histone H3.2 OS=Oncorhynchus mykiss PE=1 SV=2[more]
H32_MUSPA1.758e-6296.03Histone H3.2 OS=Mus pahari GN=H312 PE=2 SV=3[more]
H32_MOUSE1.758e-6296.03Histone H3.2 OS=Mus musculus GN=Hist1h3b PE=1 SV=2[more]
H32_ICTBU1.758e-6296.03Histone H3.2 OS=Ictiobus bubalus PE=1 SV=2[more]
H32_HUMAN1.758e-6296.03Histone H3.2 OS=Homo sapiens GN=HIST2H3A PE=1 SV=3[more]
H32_DANRE1.758e-6296.03Histone H3.2 OS=Danio rerio GN=zgc:113984 PE=2 SV=... [more]
H32_CHICK1.758e-6296.03Histone H3.2 OS=Gallus gallus GN=H3-I PE=1 SV=2[more]
H32_CAIMO1.758e-6296.03Histone H3.2 OS=Cairina moschata PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-D06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756675 ID=EY756675; Name=EY756675; organism=Citrus sinensis; type=EST; length=865bp
CCACGCGTCCGGAGAAATTGAGTAGAGGAGTTGAAGAAACTCAGAGATGG
CCCGTACCAAGCAAACTGCACGTAAGTCAACCGGAGGAAAGGCTCCTAGG
AAGCAACTTGCTACCAAGGCCGCCCGTAAGTCTGCGCCCACCACCGGTGG
TGTTAAGAAGCCTCATCGTTACCGTCCTGGAACCGTCGCCCTTCGAGAAA
TTCGCAAGTACCAGAAGAGTACCGAGCTGCTTATCAGGAAACTCCCATTC
CAGAGACTTGTTCGTGAAATTGCTCAGGACTTTAAGACTGATCTGCGTTT
CCAGAGCCATGCAGTGCTGGCCCTGCAGGAGGCAGCGGAGGCTTACCTTG
TTGGTCTCTTCGAGGACACTAACCTCTGCGCCATTCATGCAAAGCGTGTC
ACTATTATGCCCAAGGACATACAGCTTGCCCGTAGGATCCGTGGCGAGCG
TGCTTAAGCGTAATTGCTGGTTGCTTCAATTTGAATGACTGGAAGGGAAG
GGGGCAGTTGTAATGTGTTAATTTGTACGTGGGGTTGGTGGGGGTANAAA
AAANAGGNAATAGATTTCCANAANTTATAAATTATGGTTTTTGTCTCATC
TGAGTTTGTTTTGGGGGGGGTTTATAATGCTATTTGTGATGATGGGGATT
TTATTCCCATAAGGACTGGCTTTATGGGGTCTTTGGAATCTNGTGCCACG
TAGTGGGGTGTTGAACTCTCTATTATTTTGCTCTAATCTAGTTTAGTTTT
TATTAAAAAAAAAAAAAAAAAAAAAAAGGCGGCGCTTTAAGGATCCAGCT
ACGTACGGTGCATGCGACTCATACTTCTCTATGGGCCCCTAATTCATTCC
CTGGCGCCGTTTTAC
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