EY756669

Overview
NameEY756669
Unique NameEY756669
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM2_ARATH (Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 3.477e-14
Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = 2
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKLTDEEVDEMI+EADVDGDGQINYE+
Sbjct:  101 ISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEE 141          
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.541e-14
Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 2
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEDCSR 154
            IS+ ELRHVMTNLGEKLTDEEVDEMIREADVDGDG INYE+  R
Sbjct:  101 ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGHINYEEFVR 144          
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_ACHKL (Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 4.541e-14
Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 2
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYE+
Sbjct:  101 ISAAELRHMMTNLGEKLTDEEVDEMIREADIDGDGQINYEE 141          
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM6_ARATH (Calmodulin-6 OS=Arabidopsis thaliana GN=CAM6 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.541e-14
Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = 2
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKL+DEEVDEMIREADVDGDGQINYE+
Sbjct:  101 ISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQINYEE 141          
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM1_ARATH (Calmodulin-1/4 OS=Arabidopsis thaliana GN=CAM1 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 4.541e-14
Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = 2
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKLTDEEV+EMIREADVDGDGQINYE+
Sbjct:  101 ISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEE 141          
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 78.1814 bits (191), Expect = 5.931e-14
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 2
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEDCSR 154
            IS+ ELRHVMTNLGEKLTDEEVDEMIREAD+DGDG INYE+  R
Sbjct:  101 ISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGHINYEEFVR 144          
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_SUBDO (Calmodulin OS=Suberites domuncula PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 5.931e-14
Identity = 36/41 (87.80%), Postives = 39/41 (95.12%), Query Frame = 2
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKLTDEEVDEMIREAD DGDGQ+NYE+
Sbjct:  101 ISAAELRHVMTNLGEKLTDEEVDEMIREADTDGDGQVNYEE 141          
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_PLEOS (Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 5.931e-14
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 2
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKLTD EVDEMIREADVDGDGQINYE+
Sbjct:  101 ISAAELRHVMTNLGEKLTDNEVDEMIREADVDGDGQINYEE 141          
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_AGABI (Calmodulin OS=Agaricus bisporus PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.931e-14
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 2
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKLTD EVDEMIREADVDGDGQINYE+
Sbjct:  101 ISAAELRHVMTNLGEKLTDSEVDEMIREADVDGDGQINYEE 141          
BLAST of EY756669 vs. ExPASy Swiss-Prot
Match: CALM_PLECO (Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.746e-14
Identity = 36/41 (87.80%), Postives = 39/41 (95.12%), Query Frame = 2
Query:   23 ISSPELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYED 145
            IS+ ELRHVMTNLGEKLTD EVDEMIREAD+DGDGQINYE+
Sbjct:  101 ISAAELRHVMTNLGEKLTDNEVDEMIREADIDGDGQINYEE 141          
The following BLAST results are available for this feature:
BLAST of EY756669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
CALM2_ARATH3.477e-1490.24Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 P... [more]
CALM_STYLE4.541e-1486.36Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]
CALM_ACHKL4.541e-1487.80Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3[more]
CALM6_ARATH4.541e-1490.24Calmodulin-6 OS=Arabidopsis thaliana GN=CAM6 PE=1 ... [more]
CALM1_ARATH4.541e-1490.24Calmodulin-1/4 OS=Arabidopsis thaliana GN=CAM1 PE=... [more]
CALM_TETPY5.931e-1484.09Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]
CALM_SUBDO5.931e-1487.80Calmodulin OS=Suberites domuncula PE=2 SV=3[more]
CALM_PLEOS5.931e-1490.24Calmodulin OS=Pleurotus ostreatus GN=CMD1 PE=2 SV=... [more]
CALM_AGABI5.931e-1490.24Calmodulin OS=Agaricus bisporus PE=1 SV=2[more]
CALM_PLECO7.746e-1487.80Calmodulin OS=Pleurotus cornucopiae GN=CMD1 PE=1 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-C11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756669 ID=EY756669; Name=EY756669; organism=Citrus sinensis; type=EST; length=797bp
TCCGAACGACCCACGCGTCCGCATCTCTTCTCCTGAGCTGCGCCATGTGA
TGACAAACCTAGGAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATA
AGGGAAGCTGATGTTGATGGTGATGGCCAGATAAATTATGAGGATTGCAG
CAGATAAACNATGCCCCAAANATTGACCCCAACCCACCATCACTAAGAGG
TGGGGNNGCTAATATAGGAAGGGGATCCCTATTTTCCTCTCTTACAATTT
TTACTTTGATAGNCATGAGGGTCAGGCTAAAGGAAGCAATGGTCTTTTAA
TGGTGATGGGCCTGATGGTGTATGAAGAATGCTGTCTCCCCTCATCATAT
GTCTTGCGACTCCCAAAACTTTTCGGGTTTTATATTCTAATTAGTCTGCC
GTCCAATAAAGCTGGTGCCGGGTTATGGGCTTCCTTAATTCCAAAAAAAA
AAAAAAAAAGGGGCCCCCCTAAAGATCCAAACTTTCGACCCCGGATGGCA
CCTCTTACCTTCTCCTTTGGCCCCCAAATCAATGCCCGGCCCCCCTTTAA
CACCCCGGAAGGAAAAAACCGGGGGCCCCCCTATTAAACCCCTGGGAAAA
ACCCCCCTTTTCCCCGGTGGGGAAAACAAAAAGAGCCCCCCAATTTCCCC
CTCCCAAGTTTTCCCCCCCTTTATGGAGAAAAGACCCCCCCCTTACACAC
AAATTAAACGCGGGGGGTGTGGGTTTCCCCCCCGGGAGCATACTATTTAA
GGGGCCCATACCCCCCCCCCCTTTATTTTCCCCCCCTTTTTTAAAAA
back to top