EY756654

Overview
NameEY756654
Unique NameEY756654
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756654_ssr627 microsatellite EY756654_ssr627:627..644. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.541e-53
Identity = 99/170 (58.24%), Postives = 124/170 (72.94%), Query Frame = 2
Query:   32 DPKWCLPG----TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIK---GSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSGAQF 520
            D + CLP     +I+VTAT+ C          GGWCNPP  HFDLSQP F  IA++++G+VPV+Y+RV C R+GG+RFTINGHSYFNLVL++NVGGAGDVHAV++K   G +  WQ M+RN GQNWQ    L+GQ+LSF VTT D R+  SYN APA W+FG+T +G QF
Sbjct:   94 DRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQTFTGRQF 263          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 1.012e-52
Identity = 94/163 (57.67%), Postives = 120/163 (73.62%), Query Frame = 2
Query:   32 DPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSGAQ 517
            D ++C+ GT + +TATN C          GGWCNPP+QHFD+++P +  I  Y  G+VPV Y+RVPC ++GG+RFTING  YF LVL++NVGG G + +VSIKGSRTGW  MSRN G NWQ N YL+GQSLSFKVT+SDG+T T  + APA W+FG+T S +Q
Sbjct:   96 DRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGWTFGQTFSTSQ 258          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 2.254e-52
Identity = 97/159 (61.01%), Postives = 114/159 (71.70%), Query Frame = 2
Query:   38 KWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDS 508
            KWC PG  +I +TATN C          GGWCNPP+QHFD+SQP +++IA Y+AG+VPV YKRVPC R GGIRF I+GH YF LV +TNVGG+G V  +SIKGS TGW  MSRN G NWQ N YL GQSLSF V   DGR  T++N AP++W FG T S
Sbjct:   91 KWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNWFFGATYS 249          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.615e-50
Identity = 90/166 (54.22%), Postives = 115/166 (69.28%), Query Frame = 2
Query:   14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSG 511
            EI C  DP+WCLPG++ +TATNFC            WCNPPQ+HFDLS  +F  IA+Y+AGVVPV Y+R+PC + GG++F   G+ YF +VLI NVGGAGD+  V +KG++TGW  M +N GQNW   T L GQ LSF+VTTSDG T+  +N  P +W FG+T  G
Sbjct:  106 EIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFGQTFDG 269          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.615e-50
Identity = 91/166 (54.82%), Postives = 119/166 (71.69%), Query Frame = 2
Query:   29 NDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRT-DSGAQF 520
            ++ KWC  GT + +TATN C          GGWCNPP+QHFD++QP ++ I  YR G+VPV ++RV C R+GG+RFTING+SYF LVLITNVGG G + +V IKG++TGW  MSRN G NWQ N YLN Q++SF VT++ G+T    + AP++W FG+T  SG QF
Sbjct:   84 SNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNWQFGQTFTSGVQF 249          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.615e-50
Identity = 91/165 (55.15%), Postives = 116/165 (70.30%), Query Frame = 2
Query:   32 DPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRT-DSGAQF 520
            D +WCL G ++++TATNFC          GGWCNPP +HFD++QP ++ I  YR G+VPV ++RV C ++GG+RF ING  YF LV I NVGGAG + +VSIKGS+TGW  MSRN G NWQ N YL+GQ+LSF +TT+DG T    N  P+SWSFG+   S  QF
Sbjct:   88 DSRWCLKGASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALSFSITTTDGATRVFLNVVPSSWSFGQIYSSNVQF 252          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.755e-50
Identity = 90/166 (54.22%), Postives = 114/166 (68.67%), Query Frame = 2
Query:   14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSG 511
            +I CV+DP+WCLPGTI +TATNFC          G WCNPPQ+HFDLS P+F  IAQY+AGVVPV Y+R+ C R GG++F   G+ YF ++L  NVGGAGD+  + +KG +TGW  M +N GQNW     L GQ +SF+VTTSDG T+   N  P +W FG+T  G
Sbjct:  109 QIMCVHDPQWCLPGTIKITATNFCPPDYSKTE--GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 272          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.755e-50
Identity = 89/166 (53.61%), Postives = 114/166 (68.67%), Query Frame = 2
Query:   14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSG 511
            +I CVNDP+WCLPG++ +TATNFC          G WCNPPQ+HFDLS P+F  IAQY+AGVVPV Y+R+ C R GG++F   G+ YF ++L  NVGGAGD+  + +KG +TGW  M +N GQNW     L GQ +SF+VTTSDG T+   N  P +W FG+T  G
Sbjct:  102 QIMCVNDPQWCLPGSVKITATNFCPPDYSKTE--GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 265          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.016e-50
Identity = 93/155 (60.00%), Postives = 110/155 (70.97%), Query Frame = 2
Query:   41 WCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRT 502
            WC PGT I +TATN C          GGWCNPP++HFD+SQP +  IA Y+AG+VPV +KRVPC + GGIRFTI+G  YF LV + NVGG+G V  VSIKGS+T W  MSRN GQNWQ N YLN QSLSFKV   D R  T +N AP++W+FG T
Sbjct:   87 WCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNWNFGTT 241          
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 1.047e-49
Identity = 88/166 (53.01%), Postives = 115/166 (69.28%), Query Frame = 2
Query:   14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSG 511
            EI C  DP+WCLPG++ +TATNFC            WCNPPQ+HFDLS  +F  IA+Y+AGVVPV Y+R+PC + GG++F   G+ YF +VLI NVGGAGD+  V +K ++TGW  M +N GQNW  +T L GQ LSF+VTT+DG T+  +N  P +W FG+T  G
Sbjct:  112 EIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNWGFGQTFDG 275          
The following BLAST results are available for this feature:
BLAST of EY756654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
EXP21_ORYSJ4.541e-5358.24Expansin-A21 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA1_ORYSJ1.012e-5257.67Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA3_ORYSJ2.254e-5261.01Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP22_ARATH1.615e-5054.22Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXP12_ORYSJ1.615e-5054.82Expansin-A12 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP11_ARATH1.615e-5055.15Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=... [more]
EXP25_ARATH2.755e-5054.22Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]
EXP23_ARATH2.755e-5053.61Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXP33_ORYSJ8.016e-5060.00Expansin-A33 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP26_ARATH1.047e-4953.01Putative expansin-A26 OS=Arabidopsis thaliana GN=E... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-B02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756654 ID=EY756654; Name=EY756654; organism=Citrus sinensis; type=EST; length=891bp
CCACGCGTCCGATGAGATTAAGTGTGTTAATGACCCCAAATGGTGCTTGC
CCGGCACCATTATGGTCACAGCTACCAATTTTTGCCCACCGAACAACGCC
CTCCCCAACAATGCAGGCGGTTGGTGCAATCCTCCGCAGCAACATTTTGA
TCTCTCTCAGCCTGTGTTCCAACACATTGCTCAATACAGAGCTGGAGTTG
TCCCTGTAGCTTACAAGAGGGTACCCTGCGGAAGAAGGGGAGGCATCAGG
TTCACAATCAATGGGCATTCCTACTTCAACCTAGTGTTGATCACCAACGT
TGGTGGTGCTGGTGATGTTCATGCTGTTTCAATCAAAGGGTCTAGAACTG
GCTGGCAGCCCATGTCAAGAAACTGAGGCCAAAACTGGCAAAGGAACACT
TATCTCAATGGCCAAAGCCTGTCATTTAAGGTCACCACAAGCGATGGCCG
CACTGAGACTTCCTACAATGATGCCCCTGCTAGCTGGTCCTTTGGCCGAA
CTGACTCCGGTGCTCAATTCCGCTAGAGCCACCAAGACCATTAGAGATTG
GGTGTTAACACCTATTGTAGCTAAATATTCCTGCACTAAGTAGTATATTT
TAGTAGTGAATGGTACCATACTAAGGTATATATATATATATATAATATAG
AAGTAGCTATGTGGCTAGTTTTTGGCTTCAGGGTCAAAAATGAAAAGAGG
CGCTTATTCTAAATGGCGTATTTTTTTCATTTTGATTGATTTTTATGCTG
CGTGGAGTGTCTAATATGGGATCCTCTATTATCTTGGGGATCATCTGTTA
CTTCCTTTTGGGGGTTCTGGTGAAGGCACNAATGCTGAGGGGAAATTTTC
AGCCGCATTGTGTTGAAAACAGCTCCCTTTTTGATGCTCTG
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