EY756654
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.801e-41 Identity = 87/168 (51.79%), Postives = 110/168 (65.48%), Query Frame = 2 Query: 32 DPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQY-RAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDS--GAQF 520 DPKWCL G + VTATNFC GWCN P+ HFD+S P F IA+ G+VPV Y+RV C RRGG+RFT+ G FN+V+I+NVGG G V +V+++GS+ W M+RN G NWQ + L GQ LSFKVT +D +T+T N P+SW FG+T S G QF Sbjct: 89 DPKWCLRGAAVTVTATNFCPTNNN-----NGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFSSRGRQF 251
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.979e-40 Identity = 82/166 (49.40%), Postives = 112/166 (67.47%), Query Frame = 2 Query: 14 EIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGR-TETSYNDAPASWSFGRT 502 ++KCV+ P C G+ +VTATN C GGWCNPP+ HFDL++P F IA ++AG++PV+Y+RV C + GGIRF G+ Y+ LV + NVGG GD+ +++KGSRTGW MS N G ++Q + L GQSLSF++T+ R T +YN APASWS G+T Sbjct: 85 QLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASWSAGKT 249
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.585e-40 Identity = 79/159 (49.69%), Postives = 106/159 (66.67%), Query Frame = 2 Query: 35 PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDS 508 P WC G I VT TN+C GGWCN + HFD+SQP +++I Y AG++P+ Y++V C R GG+RFTING +YF LVL+TN+ G+G + ++S+KGS TGW M+RN G NWQ L GQ+LSF VT++ G+T + PA WSFG+T S Sbjct: 86 PDWCKLGKAITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 242
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 164.081 bits (414), Expect = 9.821e-40 Identity = 82/166 (49.40%), Postives = 105/166 (63.25%), Query Frame = 2 Query: 14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSG 511 EI C +P+ CL G+I +TAT+ C WC P +HFDLS P+F IAQ +A +VPV Y+RVPC + GG++F + G+ +L NVGGAGD+ AVS KGS+T W MSR GQNW N L GQS+S +VTTSDG T+ + PASW FG+T G Sbjct: 100 EIMCSPNPQGCLSGSIKITATDLCPPG-------SAWCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFGQTFDG 258
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 1.283e-39 Identity = 82/162 (50.62%), Postives = 106/162 (65.43%), Query Frame = 2 Query: 35 PKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDSGAQ 517 P C GT I VT TNFC GGWCN + HFD+SQP +++I Y AG+VP+ Y++V C R GG+RFTI G +YF LVL+TN+ G+G + ++S+KGS TGW MSRN G NWQ L GQ+LSF VT++ G+T + PA WSFG+T S Q Sbjct: 86 PSGCRMGTAITVTGTNFCPPNYDLPY--GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGWSFGQTFSTYQ 245
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.201e-37 Identity = 77/159 (48.43%), Postives = 104/159 (65.41%), Query Frame = 2 Query: 35 PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRTDS 508 P WC G I VT TN+ GGWCN + +FD+SQP +++I Y AG+VP+ Y++V C R GG+RF ING +YF LVL+TN+ G+G + ++S+KGS TGW M+RN G NWQ L GQ+LSF VT++ G+T + PA WSFG+T S Sbjct: 86 PDWCKLGKAITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 233
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.119e-34 Identity = 79/169 (46.75%), Postives = 103/169 (60.95%), Query Frame = 2 Query: 14 EIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGG--WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIK-GSRTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTT-SDGRTETSYNDAPASWSFGRT 502 +++CV C G+ I VTATN C GG WCNPP+ HFDLS+P F +A +RAG+VPV Y+RVPC R GG+RF + G+ Y+ L + NV GAGDV + +K G GW MS N G ++Q L GQ+LSFKVT+ + G+T + PASW FG T Sbjct: 91 QMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASWCFGLT 258
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 3.167e-30 Identity = 70/164 (42.68%), Postives = 98/164 (59.76%), Query Frame = 2 Query: 14 EIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG--WQPMSRN*GQNWQRNTYL-NGQSLSFKVTTSDGRTET-SYNDAPASW 487 E++CV P WC PG+ +++T TN C GGWCNPP+ HFD++ P F +AQ AG+VPV Y+RVPC R GG+RF + G+ Y+ L+ + NVGGAGDV ++S+K S G W + N G +Q L N L+ K+TT +T +DA + W Sbjct: 108 ELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYSTPQQTIIVSDAISPW 270
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.738e-28 Identity = 63/150 (42.00%), Postives = 93/150 (62.00%), Query Frame = 2 Query: 56 TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGS-RTGWQPMSRN*GQNWQRNTYLNGQSLSFKVTTSDGRTETSYNDAPASWSFGRT 502 T++VTATN +HFDL+ P F IA+ + GVVPV+Y++V C R+GGI++TI G+ +N+V++ NVGGAGDV +++KG+ R W P+ R+ GQ W+ L G+SL+F+V T D R TS+ AP W++ T Sbjct: 143 TVVVTATNQAPPPVNGMKG---------EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDWTYDNT 283
BLAST of EY756654 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 54/183 (29.51%), Postives = 79/183 (43.17%), Query Frame = 2 Query: 14 EIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRG---GIRFTINGHSYFNLVLITNVGGAGDVHAVSI-----KGSRTGWQPMSRN*GQNWQRNTYLNGQS-----LSFKVTTSDGRTETSYNDAPASWSFGRT 502 ++KC +P C + V T+ C GG C HFDLS F +A+ AG +PV Y RVPC +G R + Y+ VL+ + G GD+ AV + G W M ++ G W+ N+ G + +S ++T+ GRT + N PA W G T Sbjct: 93 QVKCSGNPS-CSGKPVTVVLTDLCP---------GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNS---GPAPLQAPMSIRLTSGSGRTLVASNVIPAGWQPGGT 262 The following BLAST results are available for this feature:
BLAST of EY756654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756654 ID=EY756654; Name=EY756654; organism=Citrus sinensis; type=EST; length=891bpback to top |