EY756650

Overview
NameEY756650
Unique NameEY756650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYE_PYRAB (Glutamyl-tRNA synthetase OS=Pyrococcus abyssi GN=gltX PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.772e-20
Identity = 68/251 (27.09%), Postives = 114/251 (45.42%), Query Frame = 2
Query:   11 GITHALRSSEYHDRNAQYYRIQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYT--KRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNLTLVGFDYLITKKKLEE 757
            G+TH  R  E+ +   +   I E  G          RL++   +LSK K    ++ GK  GWDDPR  T++ + RRG+L EA+ + I+E G  K+   + WD L  IN+K++DP+  R+  V +   V + +   P+  F+  IP H  +   G +   +T  K I++   D  L+     + L D  N  + E+       +         E + K     + W+PE      +   G + ++ K  LE+
Sbjct:  294 GVTHIFRGQEHAENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIKELIIEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADP--VPMEVEGAPE--FIAKIPLHPDHPERGTRELRFTPGKPIYVSKDDLDLLKPGSFVRLKDLFNVEIVEVGE----KIKAKFHSFEYEIARKNKWRMIHWVPEGRPCEVIIPEGDELIVRKGLLEK 536          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_PSESM (Glutaminyl-tRNA synthetase OS=Pseudomonas syringae pv. tomato GN=glnS PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.927e-20
Identity = 82/282 (29.08%), Postives = 138/282 (48.94%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRI-IPRHKKYEGAGEKATTYTKRIWIDHAD--------AQLISANEEITLMDWGNAIVK--EISRDQDGNVTQL-----SGFLHLEGSVKTTKLKLTWLPETNELVNLTLVGFDYLI---TKKKLEERRDFLDVLHP 787
            AI+GITH++ + E+      Y    ++L V  K   YEFSRLN+ YT+ SKRKL   V    V+GWDDPR  T+ G  RRG   +++  F    G +++  ++++  L    +  +D   PR   V+   +V+  +T+ P+    ++ +PRH K E  G +   +++ I+ID  D         + +  N E+ L   G+ +++  E  +D DGN+ +L        L      +  K  + W+P   E V   +  +D L      +K E+   FLD ++P
Sbjct:  237 AIEGITHSICTLEFESHRPLYDWFLDNLPVPCKPRQYEFSRLNLNYTITSKRKLKQLVDEKHVNGWDDPRMSTLSGFRRRGYTPKSIRNFCEMIGTNRSDGVVDFGMLEFSIRDDLDHSAPRAMCVLRPLKVV--ITNYPEGQVEKLELPRHPK-EDLGMRELPFSREIYIDRDDYMEEPPKGYKRLEPNGEVRLR--GSYVIRADEAIKDADGNIVELRCSYDPDTLGKNPEGRKVKGVVHWVPAA-ESVECEVRLYDRLFRSANPEKAEDGASFLDNINP 512          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_RHOBA (Glutaminyl-tRNA synthetase OS=Rhodopirellula baltica GN=glnS PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.434e-20
Identity = 62/216 (28.70%), Postives = 116/216 (53.70%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPD-KPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVK--------EISRDQDGNVTQL 622
            +++ IT ++ + E+      Y    E+LG+      EF+RLNM +T++SKRKLL  V+   V GWDDPR PT+ G+ RRG   E++  F  + G +K  + ++  +L    ++ ++ V PR  AV++   + LT+T+ P+ K  +     + + E AG +   ++  ++I+  D +  +  +   L   G+  ++        ++ +D DGNVT++
Sbjct:  262 SLEKITFSICTLEFEHHRPLYNWYCENLGIHHPRQIEFARLNMTFTVMSKRKLLQLVKENHVTGWDDPRMPTLVGLRRRGYTPESIRSFCADIGVAKFNSTIDVIRLENSVREHLNSVAPRRMAVLDP--IKLTITNWPEGKVEMMNAINNPEDESAGSREIPFSGELYIETEDFREEAPRKFFRLKKGGSVRLRSGYIVDCHDVVKDADGNVTEV 475          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_POLSQ (Glutaminyl-tRNA synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=glnS PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.434e-20
Identity = 60/179 (33.52%), Postives = 96/179 (53.63%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQ---EDLGVRK---VHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHAD 520
            A++ ++H++ + E+ +    Y  I    ++LGV K    H YEF+RLN+ YT+ SKRKLL  V+   V+GWDDPR PT+ GI RRG   E++  F    G SK  + ++   L    +  ++   PR TAV++  ++++   D          PRH  +   G +   +TK +WI+  D
Sbjct:  247 ALENVSHSICTLEFENNRPLYDWIVNSLKELGVFKDPVPHQYEFARLNLTYTITSKRKLLQLVEEQHVEGWDDPRMPTIVGIRRRGYTPESIRLFCERIGVSKADSWIDMSTLDQALRDDLEARAPRATAVLKPLKLVVENFDAAHSEACS-APRHPHHPEWGNREFNFTKELWIEADD 424          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYE_CENSY (Glutamyl-tRNA synthetase OS=Cenarchaeum symbiosum GN=gltX PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.434e-20
Identity = 66/205 (32.20%), Postives = 100/205 (48.78%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVT 616
            +IDG+THA RS EY  RN  Y  I   L +R   + EFSRL      +SKR +   +++GK+  +DDPR PT++G+ +RG+   A+ +F++  G +K   L  +  L   N+K ID    R   V + RR+     D    P    +P H   +    K  T    +++   DA+ +S    I LM  G+  +    RD  G  T
Sbjct:  282 SIDGVTHAFRSKEYELRNELYGAILGKLDMRAPMVLEFSRLEFEGMPVSKRVIRPLIEDGKIPWYDDPRLPTLEGMKKRGITPGAIRRFVISLGLTKADTLAPFGALEAFNRKEIDGNSTRLFLVGDPRRI-----DVAGLPGTAELPNHPSGDMGSRKIET-GGALYLPGKDAEGLSEGGHIRLMGLGDVRIDSAGRDLAGTYT 480          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_CLOD6 (Glutaminyl-tRNA synthetase OS=Clostridium difficile (strain 630) GN=glnS PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.404e-20
Identity = 66/219 (30.14%), Postives = 111/219 (50.68%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVRKV-HIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGP-DKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVK--------EISRDQDGNVTQLSG 628
            AI+GITH++ + E+ D+   Y    ++  +  +    EF+RLN+  T++SKRKL   V  G VDGWDDPR PT+ GI R+G   EAL  F  E G SK  + ++   L    ++ + P  P    V+  R + L +T+ P DK  +  I  + K E  G++   +++ ++I+  D       +           +K        ++ +D++GNV ++ G
Sbjct:  219 AIEGITHSICTLEFEDQRPLYDWFVKECEMENIPRQIEFARLNINNTVMSKRKLKQLVDEGIVDGWDDPRVPTISGIRRKGYTAEALRNFCSEIGVSKVNSTVDSQMLDYFLRENLQPKAPLTMGVL--RPLKLIITNYPEDKIEMLEIENNAKDESQGKRLVPFSRELYIEQDDFMEEPVKKYFRFFPGNEVRLKGAYFVKCTDVIKDENGNVVEIHG 435          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_CHRVO (Glutaminyl-tRNA synthetase OS=Chromobacterium violaceum GN=glnS PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.404e-20
Identity = 61/174 (35.06%), Postives = 89/174 (51.15%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVRK-VHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHAD 520
            AI+GITH+L S E+ D    Y  + +++ +       EFSRL ++Y L SKRKL   V +G V GWDDPR PT+ G+ RRG     +  F    G SK+ N+++   L    ++ ++   PR  AV+   +V LT  D       R  P H  +   GE+     + IWI+  D
Sbjct:  223 AIEGITHSLCSLEFEDHRPLYDWVLDNISIEHHPQQIEFSRLELLYALTSKRKLQALVNDGAVTGWDDPRMPTIAGMRRRGYSPAGIKLFAQRIGVSKSENIIDMAILEGAVRETLENDSPRVMAVVNPLKVTLTNYDAA-VTASRSAPFHPHHPEFGERDVPIAREIWIERDD 395          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_BRAJA (Glutaminyl-tRNA synthetase OS=Bradyrhizobium japonicum GN=glnS PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.404e-20
Identity = 61/175 (34.86%), Postives = 96/175 (54.86%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGV-RKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLL-TLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHAD 520
            AI+GITH++ + E+ D    Y    E L V  K H YEF+RLN+ YTLLSKR L   V+ G V GWDDPR PT+ G+ RRG+   AL +F+   G +K  ++++   L    ++ ++    R  AV++  +V++    +G  +    I   H     AG +  T+ + ++I+  D
Sbjct:  223 AIEGITHSICTLEFEDHRPLYDWFIEKLPVPSKPHQYEFARLNLTYTLLSKRVLTQLVREGHVAGWDDPRMPTMAGMRRRGVPPAALREFVKRIGVAKANSVVDVGMLEFCIREELNRTAQRRMAVLKPLKVVIENYPEGQTEELEAI--NHPDDPSAGTRKITFGRELYIEQDD 395          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYE_PYRFU (Glutamyl-tRNA synthetase OS=Pyrococcus furiosus GN=gltX PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.098e-19
Identity = 70/252 (27.78%), Postives = 114/252 (45.24%), Query Frame = 2
Query:   11 GITHALRSSEYHDRNAQYYRIQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYT--KRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLT-WLPETNELVNLTLVGFDYLITKKKLEE 757
            G+TH  R  E+ +   +   I E  G          RL++   +LSK K    ++ GK  GWDDPR  T++ + RRG+L EA+ + ILE G  K+   + WD L  IN+K++DP+  R+  V +   + +   +     F   IP H  +   G +   +   K I++   D  L+     I L D  N  + E+     G+  +     H     +  K ++  W+PE  E   +   G + +I K  LE+
Sbjct:  295 GVTHIFRGQEHSENETRQRYIYEYFGWEYPVTVHHGRLSIEGVILSKSKTRKGIEEGKYLGWDDPRLGTIRALRRRGILPEAIRELILEVGLKKSDATVSWDNLAAINRKLVDPIANRYFFVADPIPMYIEEAE----EFEAKIPLHPDHPERGYRVLKFEPGKPIYVSKDDLSLLKPGGFIRLKDLFNVEILEV-----GDTIKARFHSHEYEVARKNKWRMIHWVPEGKECEVIIPEGEELIIRKGLLEK 537          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYE_NITMS (Glutamyl-tRNA synthetase OS=Nitrosopumilus maritimus (strain SCM1) GN=gltX PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.098e-19
Identity = 70/234 (29.91%), Postives = 113/234 (48.29%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLL-----TLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPE 688
            +IDG+THA RS E+  R      I + LG+RK     FSRL      +SKR +   ++ GKV  +DDPR PT++ + RRG+  EA+ +FI+  G +K   L  +D L   N+K +D    R   V   +++ +     T+ + P+ P              G++    T+  +I   D++ I     I L+  GN  + +I     GN  +L G    +G   +  LK+ W+P+
Sbjct:  288 SIDGVTHAFRSKEFELRKELIDAILDALGMRKPQQGFFSRLEFKGMPISKRIIKPLIEEGKVSWYDDPRLPTLEALRRRGIKPEAIRKFIMSLGLTKANTLAPFDALEAFNRKFVDADSMRLFMVKNAKKLKIKNLQSTIVEVPNHPI----------NDLGKRKIEITEDFYISGDDSEAIKEQSTIRLLGLGNVKITKI-----GN--ELEGEFERDGD-SSNILKIQWVPQ 503          
The following BLAST results are available for this feature:
BLAST of EY756650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
SYE_PYRAB3.772e-2027.09Glutamyl-tRNA synthetase OS=Pyrococcus abyssi GN=g... [more]
SYQ_PSESM4.927e-2029.08Glutaminyl-tRNA synthetase OS=Pseudomonas syringae... [more]
SYQ_RHOBA6.434e-2028.70Glutaminyl-tRNA synthetase OS=Rhodopirellula balti... [more]
SYQ_POLSQ6.434e-2033.52Glutaminyl-tRNA synthetase OS=Polynucleobacter sp.... [more]
SYE_CENSY6.434e-2032.20Glutamyl-tRNA synthetase OS=Cenarchaeum symbiosum ... [more]
SYQ_CLOD68.404e-2030.14Glutaminyl-tRNA synthetase OS=Clostridium difficil... [more]
SYQ_CHRVO8.404e-2035.06Glutaminyl-tRNA synthetase OS=Chromobacterium viol... [more]
SYQ_BRAJA8.404e-2034.86Glutaminyl-tRNA synthetase OS=Bradyrhizobium japon... [more]
SYE_PYRFU1.098e-1927.78Glutamyl-tRNA synthetase OS=Pyrococcus furiosus GN... [more]
SYE_NITMS1.098e-1929.91Glutamyl-tRNA synthetase OS=Nitrosopumilus maritim... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-A09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756650 ID=EY756650; Name=EY756650; organism=Citrus sinensis; type=EST; length=876bp
TGCTATTGACGGAATAACACATGCACTCAGATCTAGTGAGTACCATGATC
GCAATGCACAGTACTATAGGATTCAGGAGGATCTGGGTGTAAGAAAGGTT
CATATTTATGAGTTTAGCAGATTGAACATGGTGTATACACTTCTCAGCAA
GCGCAAGCTTCTCTGGTTTGTACAAAACGGAAAAGTTGATGGATGGGATG
ATCCTCGGTTTCCTACTGTCCAAGGAATTGTGCGTAGGGGTCTGCTGGTT
GAGGCTTTGATCCAGTTTATTCTTGAACAGGGTGCTTCGAAAAATCTTAA
TCTTATGGAATGGGACAAACTTTGGACCATTAATAAGAAGATCATTGATC
CTGTTTGTCCTAGACATACTGCTGTCATTGAAGACAGACGTGTACTGCTG
ACTCTAACCGATGGCCCTGATAAACCATTTGTGCGCATAATTCCAAGGCA
TAAGAAGTATGAAGGTGCAGGAGAAAAAGCTACGACATACACAAAAAGGA
TATGGATAGACCATGCTGATGCTCAGCTGATTTCTGCGAATGAGGAAATT
ACTTTAATGGATTGGGGGAATGCCATAGTAAAAGAAATTAGTAGGGACCA
GGATGGAAATGTTACACAATTATCAGGATTTTTGCATCTTGAAGGATCTG
TCAAGACCACAAAGTTGAAGCTCACATGGCTACCTGAGACAAATGAGTTA
GTTAACCTCACATTGGTTGGCTTTGACTATCTAATCACAAAGAAGAAGCT
GGAAGAAAGGAGAGACTTCCTTGATGTGCTNCACCCCTGTACAGATTGAG
ACTGCAGCTATGNAGAATCAACATGCGGAATCTGAAGCGGGAGAGATTTT
GCAACTGGAGAGAACGGCTACTTCGA
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