EY756650

Overview
NameEY756650
Unique NameEY756650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9942 contig Csv1_Contig9942:888..1762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_ENTBH (Probable glutaminyl-tRNA synthetase OS=Enterocytozoon bieneusi (strain H348) GN=EBI_22570 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.697e-12
Identity = 42/133 (31.58%), Postives = 75/133 (56.39%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLL 400
            +++ ITH+  S E++ R   Y+ + ++L + +   +EFSRLN+  T+LSKRKL   V  G    WDDPRF T++G+ RRG    A+ +F+   G + +  +++   L +   K +  +  + T +I   +V +
Sbjct:  390 SLEDITHSFCSREFYTRQEPYHWLLQELDMYEPVQWEFSRLNISNTVLSKRKLTKIVDEGL--NWDDPRFYTIKGMRRRGFPASAINKFVQSVGITFSETIIDVKILESFVLKELMQIAKKATCIINPLKVYI 520          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYE_AERPE (Glutamyl-tRNA synthetase OS=Aeropyrum pernix GN=gltX PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.781e-12
Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 2
Query:   14 ITHALRSSEYHDRNAQYYRIQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQN--GKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIID 349
            ITH LR  E+     +   +   +G R  +   F RL +   +LSK K+   ++   G+  G+DDPRF T+ G+ RRG+L EA+ Q ILE G       + W  L   N+K++D
Sbjct:  299 ITHVLRGKEHQLNTEKQLAVYRCMGWRPPYFIHFGRLKLEGFILSKSKIRKLLEERPGEFMGYDDPRFGTIAGLRRRGVLAEAIRQIILEVGVKPTDATISWANLAAANRKLLD 412          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYE_SULTO (Glutamyl-tRNA synthetase OS=Sulfolobus tokodaii GN=gltX PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.449e-12
Identity = 43/135 (31.85%), Postives = 75/135 (55.56%), Query Frame = 2
Query:   11 GITHALRSSEYHDRNAQYYR-IQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTD 412
            GITH  R  E H+ NA+  + I   +G +  ++ EF RL +   ++SK K+   ++ G     DDPR PT+ G+ RRG+L E +I+ I+  G   +   + +D L  +N+K +DP+  R   V + +  ++ L++
Sbjct:  295 GITHIFRGKE-HEVNAEKQKWIYNYMGWKYPYVEEFGRLRLEGFMMSKSKIRTVLEKGV--SIDDPRLPTLAGLRRRGILPETIIETIITVGLKVSDATISFDNLAALNRKKLDPIAKRLMFVQQPKEFIIELSE 426          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYE_METS5 (Glutamyl-tRNA synthetase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=gltX PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.437e-11
Identity = 52/192 (27.08%), Postives = 94/192 (48.96%), Query Frame = 2
Query:   11 GITHALRSSEYHDRNAQYYRIQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPD-KPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVK 583
            GITH LR+ E+     +   + + +G     + EF RL +   ++SK K+   ++ G     DDPR PT+ G+ RRG++ + + + I++ G       + +D + ++N+K++DPV  R   V E   VL  L    + K  V +IP  +++    E        I++D  D   +   + + LMD  N  ++
Sbjct:  296 GITHILRAKEHTTNTEKQRWVYDYMGWEMPTVLEFGRLKLEGFMMSKSKIRGMLETGSER--DDPRLPTLAGLRRRGIIPDTVREIIIQVGLKVTDATISFDNIASVNRKLLDPVAKRLMFVREG--VLFKLEIPQEMKAKVPLIPARQEFR---EIFVKPGDEIYLDKGD---VEEGKVVRLMDLCNVKIE 477          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYE_ARCFU (Glutamyl-tRNA synthetase OS=Archaeoglobus fulgidus GN=gltX PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.437e-11
Identity = 69/244 (28.28%), Postives = 105/244 (43.03%), Query Frame = 2
Query:   11 GITHALRSSEYHDRNAQYYRIQEDLGV--------RKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYE-----GAGEKATTYTKR-IWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNEL 700
            GITH +R  +  D   +   I E  G          +V I+EF +L       S   +   ++ GK +GWDDPR PT++   RRG   EA+  F L  G  +N   +    L+  N+KIID    R+  +            GP K  +  +P  K+ E       GEK     +R I++   D + +   + + L D+ N ++ E          +  GF  LEG VK  K  + WLPE+  +
Sbjct:  287 GITHIIRGKDLIDSERRQRYIYEYFGWIYPITKHWGRVKIFEFGKL-------STSSIKKDIERGKYEGWDDPRLPTLRAFRRRGFEPEAIKSFFLSLGVGENDVSVSLKNLYAENRKIIDRKANRYFFIW-----------GPVKIEIVNLPEKKEVELPLNPHTGEKRRLKGERTIYVTKDDFERLK-GQVVRLKDFCNVLLDE--------KAEFMGF-ELEG-VKKGKNIIHWLPESEAI 501          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYE_THEPD (Glutamyl-tRNA synthetase OS=Thermofilum pendens (strain Hrk 5) GN=gltX PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11
Identity = 43/162 (26.54%), Postives = 75/162 (46.30%), Query Frame = 2
Query:   11 GITHALRSSEYHDRNAQYYRIQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTK 496
            G+TH LR  E+     +   +   +G +      F R+N+   +LSK  +   ++ G     DD R  T++ + RRG+L EA+   +LE G   +   +  DKL   N+K ++P   R+  V E  +V     +G + P    +  H  +   G +  T++K
Sbjct:  299 GVTHVLRGEEHAVNTLKQEYVYRHMGWKPPVSIHFGRMNLEGMVLSKSVIRRGIEKGLFSSIDDIRLGTLRALRRRGILPEAIWDLVLEVGIKPSTARVSVDKLHAFNRKYLEPRANRYMFVPEPAKV--ASIEGLEAPITAEVIVHPSFPERGRRRITFSK 458          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYE_SULSO (Glutamyl-tRNA synthetase OS=Sulfolobus solfataricus GN=gltX PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.313e-11
Identity = 37/118 (31.36%), Postives = 62/118 (52.54%), Query Frame = 2
Query:   11 GITHALRSSEYHDRNAQYYRIQEDLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPR 364
            GITH LR+ E+     +   I E +G     + +F RL +   ++SK K+   ++ G     DDPR PT+ G+ RRG+L + +   I++ G       + ++ +  IN+K +DPV  R
Sbjct:  303 GITHVLRAKEHMSNTEKQRYISEYMGWEFPEVLQFGRLRLEGFMMSKSKIRGMLEKGT--NRDDPRLPTLAGLRRRGILPDTIKDVIIDVGVKVTDATISFENIAAINRKKLDPVAKR 418          
The following BLAST results are available for this feature:
BLAST of EY756650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
SYQ_ENTBH1.697e-1231.58Probable glutaminyl-tRNA synthetase OS=Enterocytoz... [more]
SYE_AERPE3.781e-1235.09Glutamyl-tRNA synthetase OS=Aeropyrum pernix GN=gl... [more]
SYE_SULTO6.449e-1231.85Glutamyl-tRNA synthetase OS=Sulfolobus tokodaii GN... [more]
SYE_METS51.437e-1127.08Glutamyl-tRNA synthetase OS=Metallosphaera sedula ... [more]
SYE_ARCFU1.437e-1128.28Glutamyl-tRNA synthetase OS=Archaeoglobus fulgidus... [more]
SYE_THEPD4.180e-1126.54Glutamyl-tRNA synthetase OS=Thermofilum pendens (s... [more]
SYE_SULSO9.313e-1131.36Glutamyl-tRNA synthetase OS=Sulfolobus solfataricu... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-A09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756650 ID=EY756650; Name=EY756650; organism=Citrus sinensis; type=EST; length=876bp
TGCTATTGACGGAATAACACATGCACTCAGATCTAGTGAGTACCATGATC
GCAATGCACAGTACTATAGGATTCAGGAGGATCTGGGTGTAAGAAAGGTT
CATATTTATGAGTTTAGCAGATTGAACATGGTGTATACACTTCTCAGCAA
GCGCAAGCTTCTCTGGTTTGTACAAAACGGAAAAGTTGATGGATGGGATG
ATCCTCGGTTTCCTACTGTCCAAGGAATTGTGCGTAGGGGTCTGCTGGTT
GAGGCTTTGATCCAGTTTATTCTTGAACAGGGTGCTTCGAAAAATCTTAA
TCTTATGGAATGGGACAAACTTTGGACCATTAATAAGAAGATCATTGATC
CTGTTTGTCCTAGACATACTGCTGTCATTGAAGACAGACGTGTACTGCTG
ACTCTAACCGATGGCCCTGATAAACCATTTGTGCGCATAATTCCAAGGCA
TAAGAAGTATGAAGGTGCAGGAGAAAAAGCTACGACATACACAAAAAGGA
TATGGATAGACCATGCTGATGCTCAGCTGATTTCTGCGAATGAGGAAATT
ACTTTAATGGATTGGGGGAATGCCATAGTAAAAGAAATTAGTAGGGACCA
GGATGGAAATGTTACACAATTATCAGGATTTTTGCATCTTGAAGGATCTG
TCAAGACCACAAAGTTGAAGCTCACATGGCTACCTGAGACAAATGAGTTA
GTTAACCTCACATTGGTTGGCTTTGACTATCTAATCACAAAGAAGAAGCT
GGAAGAAAGGAGAGACTTCCTTGATGTGCTNCACCCCTGTACAGATTGAG
ACTGCAGCTATGNAGAATCAACATGCGGAATCTGAAGCGGGAGAGATTTT
GCAACTGGAGAGAACGGCTACTTCGA
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