EY756650

Overview
NameEY756650
Unique NameEY756650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9942 contig Csv1_Contig9942:888..1762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_SHIBS (Glutaminyl-tRNA synthetase OS=Shigella boydii serotype 4 (strain Sb227) GN=glnS PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23
Identity = 66/218 (30.28%), Postives = 116/218 (53.21%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVRKVHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQL 622
            A++GITH+L + E+ D    Y  + +++ +  VH   YEFSRLN+ YT++SKRKL   V +  V+GWDDPR PT+ G+ RRG    ++ +F    G ++  N +E   L +  ++ ++   PR  AVI+  ++++    G  +  +  +P H      G +   ++  IWID AD +   AN++   +  G  +          + + +D +GN+T +
Sbjct:  221 ALEGITHSLCTLEFQDNRRLYDWVLDNITI-PVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTRQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNHPNKPEMGSRQVPFSSEIWIDRADFR-EEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTI 434          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_SALTI (Glutaminyl-tRNA synthetase OS=Salmonella typhi GN=glnS PE=3 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23
Identity = 67/218 (30.73%), Postives = 115/218 (52.75%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVRKVHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQL 622
            A++GITH+L + E+ D    Y  + +++ +  VH   YEFSRLN+ YT++SKRKL   V +  V+GWDDPR PT+ G+ RRG    ++ +F    G +K  N +E   L +  ++ ++   PR  AVI+  ++++      +   V  +P H      G +   ++  IWID AD +   AN++   +  G  +          + + +D +GN+T +
Sbjct:  221 ALEGITHSLCTLEFQDNRRLYDWVLDNITI-PVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNHPNKPEMGSREVPFSGEIWIDRADFR-EEANKQYKRLVMGKEVRLRNAYVIKAERVEKDAEGNITTI 435          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_SALAR (Glutaminyl-tRNA synthetase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=glnS PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.645e-23
Identity = 67/218 (30.73%), Postives = 115/218 (52.75%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVRKVHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQL 622
            A++GITH+L + E+ D    Y  + +++ +  VH   YEFSRLN+ YT++SKRKL   V +  V+GWDDPR PT+ G+ RRG    ++ +F    G +K  N +E   L +  ++ ++   PR  AVI+  ++++      +   V  +P H      G +   ++  IWID AD +   AN++   +  G  +          + + +D +GN+T +
Sbjct:  221 ALEGITHSLCTLEFQDNRRLYDWVLDNITI-PVHPRQYEFSRLNLEYTVMSKRKLNLLVTDNHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNHPNKLEMGSREVPFSGEIWIDRADFR-EEANKQYKRLVMGKEVRLRNAYVIKAERVEKDAEGNITTI 435          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_SALPB (Glutaminyl-tRNA synthetase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=glnS PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.761e-23
Identity = 78/280 (27.86%), Postives = 137/280 (48.93%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVRKVHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQLSGFLHLE------GSVKTTKLKLTWLPETNEL-VNLTLVGFDYLITKKKLEERRDFLDVLHP 787
            A++GITH+L + E+ D    Y  + +++ +  VH   YEFSRLN+ YT++SKRKL   V +  V+GWDDPR PT+ G+ RRG    ++ +F    G +K  N +E   L +  ++ ++   PR  AVI+  ++++      +   V  +P H      G +   ++  IWID AD +   AN++   +  G  +          + + +D +GN+T +      +         +  K  + W+   + L + + L  +D L +        DFL V++P
Sbjct:  221 ALEGITHSLCTLEFQDNRRLYDWVLDNITI-PVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMV-TMPNHPNKLEMGSREVPFSGEIWIDRADFR-EEANKQYKRLVMGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPIEIRL--YDRLFSVPNPGAAEDFLSVINP 495          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_ECO5E (Glutaminyl-tRNA synthetase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=glnS PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.218e-23
Identity = 66/218 (30.28%), Postives = 116/218 (53.21%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVRKVHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQL 622
            A++GITH+L + E+ D    Y  + +++ +  VH   YEFSRLN+ YT++SKRKL   V +  V+GWDDPR PT+ G+ RRG    ++ +F    G +K  N +E   L +  ++ ++   PR  AVI+  ++++    G  +  +  +P H      G +   ++  IWID +D +   AN++   +  G  +          + + +D +GN+T +
Sbjct:  221 ALEGITHSLCTLEFQDNRRLYDWVLDNITI-PVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNHPNKPEMGSRQVPFSGEIWIDRSDFR-EEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTI 434          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_ECO57 (Glutaminyl-tRNA synthetase OS=Escherichia coli O157:H7 GN=glnS PE=3 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 6.218e-23
Identity = 66/218 (30.28%), Postives = 116/218 (53.21%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVRKVHI--YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQL 622
            A++GITH+L + E+ D    Y  + +++ +  VH   YEFSRLN+ YT++SKRKL   V +  V+GWDDPR PT+ G+ RRG    ++ +F    G +K  N +E   L +  ++ ++   PR  AVI+  ++++    G  +  +  +P H      G +   ++  IWID +D +   AN++   +  G  +          + + +D +GN+T +
Sbjct:  221 ALEGITHSLCTLEFQDNRRLYDWVLDNITI-PVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGE--MVTMPNHPNKPEMGSRQVPFSGEIWIDRSDFR-EEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTI 434          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_BORPA (Glutaminyl-tRNA synthetase OS=Bordetella parapertussis GN=glnS PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.061e-22
Identity = 77/237 (32.49%), Postives = 124/237 (52.32%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQY----YRIQE--DLGVRKVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPD-KPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPET 691
            A++GITH++ + E+ D+   Y     R+ E   L     H YEF+RLN+ Y + SKRKLL  V+ G VDGWDDPR PT+ G+ RRG    ++  F      SK+ + +++  L    +  +DPV PR  AV++  +  L +T+ P+ +      PR+     AG +   +T+ +WI+  D +     +   L   GN +     R + G V + +GF   E S K  +++  +LP+T
Sbjct:  249 ALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLK--LVITNHPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFP-GNTV-----RLKYGYVVRCTGFTKDE-SGKVVEVQAEYLPDT 476          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_ALTMD (Glutaminyl-tRNA synthetase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=glnS PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.061e-22
Identity = 66/215 (30.70%), Postives = 114/215 (53.02%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVRKV-HIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISAN---------EEITLMDWGNAIVKEISRDQDGNVT 616
            AI+GITH+L + E+ D    Y  + E++ +      YEFSRLN+ YT+LSKR+L+  V+   V GWDDPR PT+ G+ RRG    ++++F    G +K  N++E   L    +  ++   PR  AV++  ++++   +   K    + P H   E  G +   +++ ++I+  D +  SAN         +E+ L +        + +D++GNVT
Sbjct:  221 AIEGITHSLCTLEFQDNRRLYDWVIENISIDCTPRQYEFSRLNLEYTVLSKRRLIQLVEENHVSGWDDPRMPTIAGLRRRGYTPGSIVEFCKRIGVTKMDNMVEMSMLEACIRDDLNANAPRAMAVLDPIKLVIENYE-EGKTETLVAPNHPNDESMGTRNIGFSREVYIEAEDFR-ESANKKFKRLVLEKEVRLRNAYVVKANRVEKDEEGNVT 433          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_VIBVY (Glutaminyl-tRNA synthetase OS=Vibrio vulnificus (strain YJ016) GN=glnS PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.385e-22
Identity = 64/218 (29.36%), Postives = 116/218 (53.21%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRI-IPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQL 622
            A++GITH++ + E+ D    Y  + +++ +  + H YEFSRLN+ YT++SKRKL   V    V+GWDDPR PT+ G+ RRG    ++ +F    G +K  N++E+  L +  +  ++   PR  AV++   V L + + P      + +  H      GE+   +++ IWI+  D +   AN++   +  G+ +          + + +D +GN+T +
Sbjct:  221 ALEGITHSICTLEFMDNRRLYDWVLDNITIDCRPHQYEFSRLNLEYTVMSKRKLNQLVTEKLVNGWDDPRMPTISGLRRRGFTPASIREFCKRIGVTKQENMIEFSSLESCIRDDLNENAPRAMAVLDP--VKLVIENFPAGEVENLTVANHPNKPEMGEREVPFSREIWIEREDFR-EEANKKYKRLVLGSEVRLRGAYVIKAERVEKDDEGNITTI 435          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_VIBSL (Glutaminyl-tRNA synthetase OS=Vibrio splendidus (strain LGP32) GN=glnS PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.385e-22
Identity = 63/217 (29.03%), Postives = 113/217 (52.07%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQL 622
            A++GITH++ + E+ D    Y  + +++ +  +   YEFSRLN+ YT++SKRKL   V    V+GWDDPR PT+ G+ RRG    ++ +F    G +K  N++E+  L +  +  ++   PR  AV++  +V++   D  D      +  H      G +   +T+ +WI+  D +   AN++   +  G  +          + I +D +GN+T +
Sbjct:  221 ALEGITHSICTLEFQDNRRLYDWVLDNITIDCQPRQYEFSRLNLEYTVMSKRKLNQLVVENLVEGWDDPRMPTISGLRRRGFTSSSIREFCKRIGVTKQENMIEFGSLESCIRDDLNENAPRAMAVLDPIKVVIENYDA-DTVETLTVANHPNKPEMGTREVPFTREVWIERDDFR-EEANKKYKRLVLGKEVRLRGAYVIKAERIEKDAEGNITTI 435          
The following BLAST results are available for this feature:
BLAST of EY756650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
SYQ_SHIBS3.645e-2330.28Glutaminyl-tRNA synthetase OS=Shigella boydii sero... [more]
SYQ_SALTI3.645e-2330.73Glutaminyl-tRNA synthetase OS=Salmonella typhi GN=... [more]
SYQ_SALAR3.645e-2330.73Glutaminyl-tRNA synthetase OS=Salmonella arizonae ... [more]
SYQ_SALPB4.761e-2327.86Glutaminyl-tRNA synthetase OS=Salmonella paratyphi... [more]
SYQ_ECO5E6.218e-2330.28Glutaminyl-tRNA synthetase OS=Escherichia coli O15... [more]
SYQ_ECO576.218e-2330.28Glutaminyl-tRNA synthetase OS=Escherichia coli O15... [more]
SYQ_BORPA1.061e-2232.49Glutaminyl-tRNA synthetase OS=Bordetella parapertu... [more]
SYQ_ALTMD1.061e-2230.70Glutaminyl-tRNA synthetase OS=Alteromonas macleodi... [more]
SYQ_VIBVY1.385e-2229.36Glutaminyl-tRNA synthetase OS=Vibrio vulnificus (s... [more]
SYQ_VIBSL1.385e-2229.03Glutaminyl-tRNA synthetase OS=Vibrio splendidus (s... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-A09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756650 ID=EY756650; Name=EY756650; organism=Citrus sinensis; type=EST; length=876bp
TGCTATTGACGGAATAACACATGCACTCAGATCTAGTGAGTACCATGATC
GCAATGCACAGTACTATAGGATTCAGGAGGATCTGGGTGTAAGAAAGGTT
CATATTTATGAGTTTAGCAGATTGAACATGGTGTATACACTTCTCAGCAA
GCGCAAGCTTCTCTGGTTTGTACAAAACGGAAAAGTTGATGGATGGGATG
ATCCTCGGTTTCCTACTGTCCAAGGAATTGTGCGTAGGGGTCTGCTGGTT
GAGGCTTTGATCCAGTTTATTCTTGAACAGGGTGCTTCGAAAAATCTTAA
TCTTATGGAATGGGACAAACTTTGGACCATTAATAAGAAGATCATTGATC
CTGTTTGTCCTAGACATACTGCTGTCATTGAAGACAGACGTGTACTGCTG
ACTCTAACCGATGGCCCTGATAAACCATTTGTGCGCATAATTCCAAGGCA
TAAGAAGTATGAAGGTGCAGGAGAAAAAGCTACGACATACACAAAAAGGA
TATGGATAGACCATGCTGATGCTCAGCTGATTTCTGCGAATGAGGAAATT
ACTTTAATGGATTGGGGGAATGCCATAGTAAAAGAAATTAGTAGGGACCA
GGATGGAAATGTTACACAATTATCAGGATTTTTGCATCTTGAAGGATCTG
TCAAGACCACAAAGTTGAAGCTCACATGGCTACCTGAGACAAATGAGTTA
GTTAACCTCACATTGGTTGGCTTTGACTATCTAATCACAAAGAAGAAGCT
GGAAGAAAGGAGAGACTTCCTTGATGTGCTNCACCCCTGTACAGATTGAG
ACTGCAGCTATGNAGAATCAACATGCGGAATCTGAAGCGGGAGAGATTTT
GCAACTGGAGAGAACGGCTACTTCGA
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