EY756650

Overview
NameEY756650
Unique NameEY756650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9942 contig Csv1_Contig9942:888..1762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_PROMH (Glutaminyl-tRNA synthetase OS=Proteus mirabilis (strain HI4320) GN=glnS PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.030e-22
Identity = 66/217 (30.41%), Postives = 109/217 (50.23%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQL 622
            A++ ITH+L + E+ D    Y  + +++ +      YEFSRLN+ YT++SKRKL   V    VDGWDDPR PT+ G+ RRG   E++ +F    G +K  N +E   L    +  ++   PR  AVI+   V L + + P+   +   P H      G +   +++ I+ID AD +   AN +   +  G  +          + + +D+ G +T +
Sbjct:  221 ALENITHSLCTLEFQDNRRLYDWVLDNITIPCHPRQYEFSRLNLEYTVMSKRKLNQLVTENIVDGWDDPRMPTISGLRRRGYTAESIREFCQRIGVTKQDNNVEMASLEACIRDDLNENAPRAMAVIDP--VRLVIENMPEGEEILTAPNHPNKPEMGTREVPFSREIYIDRADFK-EEANRQYKRLVLGKEVRLRNAYVIKAERVEKDEQGEITTI 434          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_ALISL (Glutaminyl-tRNA synthetase OS=Aliivibrio salmonicida (strain LFI1238) GN=glnS PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.264e-22
Identity = 66/217 (30.41%), Postives = 113/217 (52.07%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQL 622
            A++GITH++ + E+ D    Y  + E++ +  + H YEFSRLN+ YT++SKRKL   V    V+GWDDPR PTV G+ RRG    ++ +F    G +K  N++E+  L +  +  ++   PR  AV+E  +V++   +   K     +  H      G +   +T+ I+I+  D +   AN++   +  G  +            I +D+ GN+T +
Sbjct:  221 ALEGITHSICTLEFQDNRRLYDWVLENITIDCQPHQYEFSRLNLEYTIMSKRKLNELVTEKLVNGWDDPRMPTVSGLRRRGFTAGSIREFCKRIGVTKQENMIEFGSLESCIRDDLNENAPRAMAVLEPVKVVIENYE-EGKVETLNVANHPNKPEMGTREVPFTREIYIEQDDFR-EEANKKYKRLVLGKEVRLRGAYVIQANRIEKDEAGNITTI 435          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_XANCP (Glutaminyl-tRNA synthetase OS=Xanthomonas campestris pv. campestris GN=glnS PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.875e-22
Identity = 85/299 (28.43%), Postives = 139/299 (46.49%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVR-------------------KVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLT-LTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADA--------QLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLE------GSVKTTKLKLTWLPETNELVNLTLVGFDYLITKKKLE---ERRDFLDVLHP 787
            A++GITH+L + E+ D    Y    + + +                    K    EFSRLN+ YT++SKRKL   V+   VDGWDDPR  T+QG+ RRG    A+  F+   G SK  +++++  L    ++ +D    R  AVI+  +++LT L +G  +        H K E  G +   + + +WI+  D         + +    EI L   G A V E+ +D  G + +L G+L  E      GS +  K  + W+   +  V   +  +D L + +K +   E + + D L+P
Sbjct:  227 AVEGITHSLCTLEFEDHRPLYDWCVDKVDLSGHPELLAPLLGKGYPKEAAKPRQIEFSRLNINYTVMSKRKLTALVEEQLVDGWDDPRMYTLQGLRRRGYTPAAMRLFVDRVGISKQNSVIDFSVLEGCLREDLDAAAARRMAVIDPLKLVLTNLPEGHTETLQ--FSNHPKDESFGTREVPFARELWIEREDFAEVPPKGWKRLVPGGEIRLRGAGIARVDEVIKDAAGEIVELRGWLDPESRPGMIGSNRKVKGTIHWVSAVH-AVEAEIRLYDRLFSVEKPDDESEGKTYRDYLNP 522          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_XANC8 (Glutaminyl-tRNA synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=glnS PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.875e-22
Identity = 85/299 (28.43%), Postives = 139/299 (46.49%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVR-------------------KVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLT-LTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADA--------QLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLE------GSVKTTKLKLTWLPETNELVNLTLVGFDYLITKKKLE---ERRDFLDVLHP 787
            A++GITH+L + E+ D    Y    + + +                    K    EFSRLN+ YT++SKRKL   V+   VDGWDDPR  T+QG+ RRG    A+  F+   G SK  +++++  L    ++ +D    R  AVI+  +++LT L +G  +        H K E  G +   + + +WI+  D         + +    EI L   G A V E+ +D  G + +L G+L  E      GS +  K  + W+   +  V   +  +D L + +K +   E + + D L+P
Sbjct:  227 AVEGITHSLCTLEFEDHRPLYDWCVDKVDLSGHPELLAPLLGKGYPKEAAKPRQIEFSRLNINYTVMSKRKLTALVEEQLVDGWDDPRMYTLQGLRRRGYTPAAMRLFVDRVGISKQNSVIDFSVLEGCLREDLDAAAARRMAVIDPLKLVLTNLPEGHTETLQ--FSNHPKDESFGTREVPFARELWIEREDFAEVPPKGWKRLVPGGEIRLRGAGIARVDEVIKDAAGEIVELRGWLDPESRPGMIGSNRKVKGTIHWVSAVH-AVEAEIRLYDRLFSVEKPDDESEGKTYRDYLNP 522          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_VIBCM (Glutaminyl-tRNA synthetase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=glnS PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.875e-22
Identity = 66/228 (28.95%), Postives = 116/228 (50.88%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVL-----------LTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQL 622
            A++GITH++ + E+ D    Y  + +++ +      YEFSRLN+ YT++SKRKL   V    V GWDDPR PT+ G+ RRG    A+ +F    G +K  N++E+  L +  +  ++   PR  AV++  +++           LTL + P+KP +            G++   +T+ +WI+  D +   AN++   +  G  +          + I +D+ GN+T +
Sbjct:  221 ALEGITHSICTLEFQDNRRLYDWVLDNITIPCHPRQYEFSRLNLEYTVMSKRKLNQLVTEKLVTGWDDPRMPTISGLRRRGFTPSAIREFCKRIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFAAGTVETLTLANHPNKPEM------------GDREVPFTRELWIEREDFR-EEANKKYKRLVLGKEVRLRGAYVIKAERIEKDEQGNITTI 435          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_VIBCH (Glutaminyl-tRNA synthetase OS=Vibrio cholerae GN=glnS PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.875e-22
Identity = 66/228 (28.95%), Postives = 116/228 (50.88%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVL-----------LTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQL 622
            A++GITH++ + E+ D    Y  + +++ +      YEFSRLN+ YT++SKRKL   V    V GWDDPR PT+ G+ RRG    A+ +F    G +K  N++E+  L +  +  ++   PR  AV++  +++           LTL + P+KP +            G++   +T+ +WI+  D +   AN++   +  G  +          + I +D+ GN+T +
Sbjct:  221 ALEGITHSICTLEFQDNRRLYDWVLDNITIPCHPRQYEFSRLNLEYTVMSKRKLNQLVTEKLVTGWDDPRMPTISGLRRRGFTPSAIREFCKRIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFAAGTVETLTLANHPNKPEM------------GDREVPFTRELWIEREDFR-EEANKKYKRLVLGKEVRLRGAYVIKAERIEKDEQGNITTI 435          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_VIBC3 (Glutaminyl-tRNA synthetase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=glnS PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.875e-22
Identity = 66/228 (28.95%), Postives = 116/228 (50.88%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVL-----------LTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQL 622
            A++GITH++ + E+ D    Y  + +++ +      YEFSRLN+ YT++SKRKL   V    V GWDDPR PT+ G+ RRG    A+ +F    G +K  N++E+  L +  +  ++   PR  AV++  +++           LTL + P+KP +            G++   +T+ +WI+  D +   AN++   +  G  +          + I +D+ GN+T +
Sbjct:  221 ALEGITHSICTLEFQDNRRLYDWVLDNITIPCHPRQYEFSRLNLEYTVMSKRKLNQLVTEKLVTGWDDPRMPTISGLRRRGFTPSAIREFCKRIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFAAGTVETLTLANHPNKPEM------------GDREVPFTRELWIEREDFR-EEANKKYKRLVLGKEVRLRGAYVIKAERIEKDEQGNITTI 435          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_PSEA6 (Glutaminyl-tRNA synthetase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=glnS PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.979e-22
Identity = 67/217 (30.88%), Postives = 110/217 (50.69%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVRKV-HIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQL 622
            AI+GITH+L + E+ D    Y  + E++ +  V   YEFSRLN+ YT+LSKRKL+  V    V GWDDPR PT+ G+ RRG    ++ +F    G +K  N++E   L    +  ++   PR  AV+E  ++++      D   +   P H      G +   + + I+I+  D +   AN++   +  G  +          + + +D+ GNVT +
Sbjct:  221 AIEGITHSLCTLEFQDNRRLYDWVLENVTIDVVPRQYEFSRLNLEYTVLSKRKLIQLVDEEFVSGWDDPRMPTIAGLRRRGFTAASIREFCKRIGVTKMDNMVEMSMLEAPLRDELNENAPRAMAVLEPVKIVIE-NYPQDGVELLAAPNHPNRPELGSREVPFAREIYIEAEDFR-EEANKKFKRLVLGKEVRLRNAYVIKAQRVEKDEQGNVTTI 435          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_ERWCT (Glutaminyl-tRNA synthetase OS=Erwinia carotovora subsp. atroseptica GN=glnS PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.979e-22
Identity = 63/217 (29.03%), Postives = 111/217 (51.15%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQEDLGVR-KVHIYEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAI---------VKEISRDQDGNVTQL 622
            A++GITH+L + E+ D    Y  + +++ +      YEFSRLN+ Y ++SKRKL   V    V+GWDDPR PT+ G+ RRG    ++ +F +  G +K  N +E   L +  +  ++   PR  AV++  +V++       + FV  +P H      G +   +++ ++ID AD +   AN++   +  G  +            I +D+ G +T +
Sbjct:  221 ALEGITHSLCTLEFQDNRRLYDWVLDNISIPCHPRQYEFSRLNLEYAIMSKRKLNQLVVENVVEGWDDPRMPTISGLRRRGYSASSIREFCVRIGVTKQDNNVEMAALESCIRDDLNENAPRAMAVLDPVKVVIENLPAGHEEFV-AMPNHPNKPEMGSRQVAFSREVYIDRADFR-EEANKQYKRLVLGKEVRLRNAYVIKADRIEKDEQGTITTI 435          
BLAST of EY756650 vs. ExPASy Swiss-Prot
Match: SYQ_BORA1 (Glutaminyl-tRNA synthetase OS=Bordetella avium (strain 197N) GN=glnS PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.173e-21
Identity = 76/236 (32.20%), Postives = 123/236 (52.12%), Query Frame = 2
Query:    2 AIDGITHALRSSEYHDRNAQYYRIQE---DLGVRKVHI---YEFSRLNMVYTLLSKRKLLWFVQNGKVDGWDDPRFPTVQGIVRRGLLVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPET 691
            A++GITH++ + E+ D+   Y  I     DLG     +   YEFSRLNM Y + SKRKLL  V+ G VDGWDDPR PT+ G+ RRG    A+  F      SK+ + +++  L    +  +DP   R  AV++  ++++T     D+  V   PR+     AG++   +++ +WI+  D +  +  +   L   GN +     R + G V + +GF   E     T+++  +LP+T
Sbjct:  249 ALEGITHSICTLEFEDQRPFYDWILARLADLGKLARPLPRQYEFSRLNMSYIVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTASAIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPGTTRSVAVLDPLKLVIT-NYPKDQTEVCKAPRNPHDPEAGQREFPFSRELWIERDDFREEAPKKYFRLFP-GNLV-----RLKYGYVVRCTGFTKDEAG-NITEVQAEYLPDT 476          
The following BLAST results are available for this feature:
BLAST of EY756650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
SYQ_PROMH4.030e-2230.41Glutaminyl-tRNA synthetase OS=Proteus mirabilis (s... [more]
SYQ_ALISL5.264e-2230.41Glutaminyl-tRNA synthetase OS=Aliivibrio salmonici... [more]
SYQ_XANCP6.875e-2228.43Glutaminyl-tRNA synthetase OS=Xanthomonas campestr... [more]
SYQ_XANC86.875e-2228.43Glutaminyl-tRNA synthetase OS=Xanthomonas campestr... [more]
SYQ_VIBCM6.875e-2228.95Glutaminyl-tRNA synthetase OS=Vibrio cholerae sero... [more]
SYQ_VIBCH6.875e-2228.95Glutaminyl-tRNA synthetase OS=Vibrio cholerae GN=g... [more]
SYQ_VIBC36.875e-2228.95Glutaminyl-tRNA synthetase OS=Vibrio cholerae sero... [more]
SYQ_PSEA68.979e-2230.88Glutaminyl-tRNA synthetase OS=Pseudoalteromonas at... [more]
SYQ_ERWCT8.979e-2229.03Glutaminyl-tRNA synthetase OS=Erwinia carotovora s... [more]
SYQ_BORA11.173e-2132.20Glutaminyl-tRNA synthetase OS=Bordetella avium (st... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-011-A09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756650 ID=EY756650; Name=EY756650; organism=Citrus sinensis; type=EST; length=876bp
TGCTATTGACGGAATAACACATGCACTCAGATCTAGTGAGTACCATGATC
GCAATGCACAGTACTATAGGATTCAGGAGGATCTGGGTGTAAGAAAGGTT
CATATTTATGAGTTTAGCAGATTGAACATGGTGTATACACTTCTCAGCAA
GCGCAAGCTTCTCTGGTTTGTACAAAACGGAAAAGTTGATGGATGGGATG
ATCCTCGGTTTCCTACTGTCCAAGGAATTGTGCGTAGGGGTCTGCTGGTT
GAGGCTTTGATCCAGTTTATTCTTGAACAGGGTGCTTCGAAAAATCTTAA
TCTTATGGAATGGGACAAACTTTGGACCATTAATAAGAAGATCATTGATC
CTGTTTGTCCTAGACATACTGCTGTCATTGAAGACAGACGTGTACTGCTG
ACTCTAACCGATGGCCCTGATAAACCATTTGTGCGCATAATTCCAAGGCA
TAAGAAGTATGAAGGTGCAGGAGAAAAAGCTACGACATACACAAAAAGGA
TATGGATAGACCATGCTGATGCTCAGCTGATTTCTGCGAATGAGGAAATT
ACTTTAATGGATTGGGGGAATGCCATAGTAAAAGAAATTAGTAGGGACCA
GGATGGAAATGTTACACAATTATCAGGATTTTTGCATCTTGAAGGATCTG
TCAAGACCACAAAGTTGAAGCTCACATGGCTACCTGAGACAAATGAGTTA
GTTAACCTCACATTGGTTGGCTTTGACTATCTAATCACAAAGAAGAAGCT
GGAAGAAAGGAGAGACTTCCTTGATGTGCTNCACCCCTGTACAGATTGAG
ACTGCAGCTATGNAGAATCAACATGCGGAATCTGAAGCGGGAGAGATTTT
GCAACTGGAGAGAACGGCTACTTCGA
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