EY756643
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756643 vs. ExPASy Swiss-Prot
Match: RS13_METMP (30S ribosomal protein S13P OS=Methanococcus maripaludis GN=rps13p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17 Identity = 42/127 (33.07%), Postives = 76/127 (59.84%), Query Frame = 1 Query: 25 DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 405 +F+H +R+ T+++GK + +AL +KGIGR +A V + ++D ++AG L+ ++ + V+ +P IP W NR+KD G ++ L + +++D+ +KKIR ++G+RH L RGQ Sbjct: 5 EFKHRIRISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLEDPATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRHELRLPCRGQ 131
BLAST of EY756643 vs. ExPASy Swiss-Prot
Match: RS13_METMJ (30S ribosomal protein S13P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps13p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17 Identity = 46/128 (35.94%), Postives = 75/128 (58.59%), Query Frame = 1 Query: 22 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 405 E+ ++ +RV NT++DG + + ALT IKGIG + + A VD + G+L + + V + ++PDW +NRQKD G+ ++ L M DD+ R++K+R++RG+RH G +VRGQ Sbjct: 4 EEIKYFVRVRNTDLDGTKAVHIALTGIKGIGPHTSRTITALAAVDPHAILGKLDDESVGRIANAVDTYTE-QVPDWMVNRQKDVYTGEVRHLLGTDLTMMNDDDVNRMRKMRSYRGIRHETGQKVRGQ 130
BLAST of EY756643 vs. ExPASy Swiss-Prot
Match: RS13_PYRCJ (30S ribosomal protein S13P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps13p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16 Identity = 42/128 (32.81%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 22 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 405 ++ + I+R+ +T++DG + + +AL I+GIG A +C+K +D + G L +++ L V N + P WFLNR+KD + G+ ++ + L + + D++ +KK+++ +G+RH GL+VRGQ Sbjct: 3 QEIRAIVRIGDTDLDGNKTVAYALAKIRGIGIATAYAICRKLGIDPHATLGLLPEDQINKLDWAVRNLHELA-PAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVRGQ 129
BLAST of EY756643 vs. ExPASy Swiss-Prot
Match: RS13_CENSY (30S ribosomal protein S13P OS=Cenarchaeum symbiosum GN=rps13p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.772e-16 Identity = 39/128 (30.47%), Postives = 77/128 (60.16%), Query Frame = 1 Query: 22 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 405 ++++HI+R+L ++ G++K + L I+GIG A + +D N G L+ ++ ++ ++ +P P WFLNR+KD + G+ + ++ ++ +R+D+ER + + +G RH +GL+VRGQ Sbjct: 49 QEYKHIVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASIEKLLQDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMFGLKVRGQ 176
BLAST of EY756643 vs. ExPASy Swiss-Prot
Match: RS13_METLZ (30S ribosomal protein S13P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps13p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16 Identity = 49/146 (33.56%), Postives = 77/146 (52.74%), Query Frame = 1 Query: 25 DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVV-ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXXSKKR 459 + ++ +R++NT++DG Q + ALT IKGIG A I+ ++A VD G L ++ + V A P +P W +NR D G+ + + L + DD+ +KK+R +RG+RH GL+VRGQ SK+R Sbjct: 6 ELKYFVRIINTDLDGTQPVQLALTGIKGIGLHAALIIARRAGVDTRATMGLLGDEDVAAIEEQVKAYPAS--VPKWMVNRPVDVYSGEPKHLYGSDLSLAKEDDINLMKKMRCYRGIRHENGLKVRGQRTKATGRFGKIVGVSKRR 149
BLAST of EY756643 vs. ExPASy Swiss-Prot
Match: RS13_HALWD (30S ribosomal protein S13P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps13p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16 Identity = 46/128 (35.94%), Postives = 73/128 (57.03%), Query Frame = 1 Query: 22 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 405 +D Q+ +R+ T++DG + + +LT +KGIG+R A I+ A VD + G L E+D++ V N IP W NR++D+ G L+ K R D+ R+K I +++G+RH G +VRGQ Sbjct: 16 DDLQYFVRIGTTDLDGTKAVERSLTDMKGIGKRTARIITDVASVDRHATFGLLEEDEIDSITDAVEN-LDDHIPGWMTNRREDFFSGDTDHKTGADLEEKRRHDVNRMKMIDSYKGVRHKRGQKVRGQ 142
BLAST of EY756643 vs. ExPASy Swiss-Prot
Match: RS13_PYRAE (30S ribosomal protein S13P OS=Pyrobaculum aerophilum GN=rps13p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16 Identity = 42/128 (32.81%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 22 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 405 ++ + I+R+ +T++DG +++ +AL I+GIG A +C K +D + G L +++ L V N + P WFLNR+KD + G+ ++ + L + + D++ +KK+++ +G+RH GL+VRGQ Sbjct: 3 QEIRAIVRIGDTDLDGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAILGALPEDQINKLDWAVRNLHELA-PAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGVRHSLGLKVRGQ 129
BLAST of EY756643 vs. ExPASy Swiss-Prot
Match: RS13_PYRAR (30S ribosomal protein S13P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps13p PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16 Identity = 42/128 (32.81%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 22 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 405 ++ + I+RV +T+++G +++ +AL I+GIG A +C K +D + G L +++ L V N + P WFLNR+KD + G+ ++ + L + + D++ +KK+++ +G+RH GL+VRGQ Sbjct: 3 QELRAIVRVGDTDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAVRNLHEVA-PAWFLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVRGQ 129
BLAST of EY756643 vs. ExPASy Swiss-Prot
Match: RS13_HALSA (30S ribosomal protein S13P OS=Halobacterium salinarium GN=rps13p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15 Identity = 42/130 (32.31%), Postives = 73/130 (56.15%), Query Frame = 1 Query: 16 VREDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 405 V ED Q+ +R+ T++DG + + AL + G+GRR+A IV +A VD G L ++++ V + + P W NRQ D+ G+ + +++ D+ R++ IR+++G+RH G +VRGQ Sbjct: 9 VDEDIQYFVRIGQTDLDGTKTVERALAELGGVGRRVARIVADEAGVDRTATMGGLEDDAIESVTDAVDSFTEHA-PAWLANRQNDFYTGENQHITGTDVELTRDQDINRMRMIRSYKGIRHERGQKVRGQ 137
BLAST of EY756643 vs. ExPASy Swiss-Prot
Match: RS13_NANEQ (30S ribosomal protein S13P OS=Nanoarchaeum equitans GN=rps13p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14 Identity = 41/123 (33.33%), Postives = 67/123 (54.47%), Query Frame = 1 Query: 37 ILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 405 I+ + + ++DG + I L + G+ A+ VC +D ++ G LS EL+ L + NP ++ IP W NR++D + GK +V N + + D++R +I + RG RH GL VRGQ Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDALRNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPVRGQ 135 The following BLAST results are available for this feature:
BLAST of EY756643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756643 ID=EY756643; Name=EY756643; organism=Citrus sinensis; type=EST; length=703bpback to top |