EY756640

Overview
NameEY756640
Unique NameEY756640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756640_ssr216 microsatellite EY756640_ssr216:216..227. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13343 contig Csv1_Contig13343:1..889. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E13L_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL153 OS=Nicotiana tabacum GN=GGL4 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.781e-18
Identity = 47/132 (35.61%), Postives = 82/132 (62.12%), Query Frame = 1
Query:  334 TIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNS-SSLVVPAMQNVFTALKKAGLHKRIKVSS 726
            +IGVCYG+ A++LP+   V  L K + I+ +RIY  +  + KA   + +E+++ +PN DL   A   S A+ W++++I  ++P  K  YI++G EV+   +   S  ++ AM+NV+ AL  +GL  +IKV++
Sbjct:   31 SIGVCYGKIANNLPSEQDVINLYKANGIRKMRIYYPDKNIFKALKGSNIEIILDVPNQDLEALAN-SSIANGWVQDNIRSHFPYVKFKYISIGNEVSPINNGQYSQFLLHAMENVYNALAASGLQDKIKVTT 161          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E13A_HORVU (Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vulgare PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.781e-18
Identity = 53/134 (39.55%), Postives = 83/134 (61.94%), Query Frame = 1
Query:  334 TIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLL-PFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNSSSLVVPAMQNVFTALKKAGLHKRIKVSSTI 732
            TIGVCYG  A++LP  ++V QL + + +  +RIY ++ + L A   +G+ L++ +  +D+L   A   SNA +W+++++ PYYPA  I YI  G EV       +  +VPAM+N+  ALK  GL   IKVS++I
Sbjct:    1 TIGVCYGVVANNLPPANEVVQLYRSNGLTGMRIYFADAKALSALRGSGIGLILDVGGNDVLASLAANASNAANWVRDNVRPYYPAVNIKYIAAGNEV---WGGDTQNIVPAMRNLGAALKAPGL-GTIKVSTSI 130          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E133_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 3 (Fragment) OS=Solanum tuberosum GN=GLUB3 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.057e-17
Identity = 47/127 (37.01%), Postives = 77/127 (60.63%), Query Frame = 1
Query:  364 DDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNSS--SLVVPAMQNVFTALKKAGLHKRIKVSSTIPL 738
            ++LP+  +V QL K  NI  LR+YD N   L A   + +E+++G+PN D+   A    +A  W++ ++  ++P  KI YI VG E++  T  SS  S  VPA+ N++ A+ +AGL   IKVS+++ +
Sbjct:    1 NNLPSHSEVIQLYKSRNIGRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAIGEAGLGNDIKVSTSVDM 127          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E13B_BRACM (Glucan endo-1,3-beta-glucosidase OS=Brassica campestris GN=BGL PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.380e-17
Identity = 48/135 (35.56%), Postives = 81/135 (60.00%), Query Frame = 1
Query:  337 IGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNSSSLVVPAMQNVFTALKKAGLHKRIKVSSTIPLG 741
            IGVC+G+  +++P P +V  + KQ++I  +R+Y  N   L A   + +E ++ +PN DL   A  Q+ A++W+++++  Y    +  YI+VG EV      +++L + AMQN+  AL  AGL   IKVS+T  +G
Sbjct:   27 IGVCFGQMGNNIPNPSEVVAMFKQYSIPRMRMYGPNPDALNALRGSNIEFILDVPNGDLKRLADSQAEANTWVRDNVQKYND-VRFKYISVGNEVKPGEPGAAAL-IQAMQNIDRALSAAGL-SNIKVSTTTFMG 158          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E13B_MAIZE (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Zea mays PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.849e-17
Identity = 52/133 (39.10%), Postives = 76/133 (57.14%), Query Frame = 1
Query:  334 TIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNSSSLVVPAMQNVFTALKKAGLHKRIKVSSTI 732
            +IGVCYG N D+LP    V QL + + I  LRIY  +   L A + T + L++ +PN+DL   A   S A +W+++++     +A   YI VG EV+     S   ++PAMQN+  AL  AGL   IKVS+ +
Sbjct:   29 SIGVCYGVNGDNLPPASDVVQLYQSNGINLLRIYFPDANPLNALSGTSIGLIMDVPNTDLASLASDPSAAAAWVQSNVQASRRSA-CRYIAVGNEVSGGDTGS---ILPAMQNLNAALANAGLGGSIKVSTAV 157          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.945e-17
Identity = 43/137 (31.39%), Postives = 82/137 (59.85%), Query Frame = 1
Query:  331 STIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEV-TESTDNSSSLVVPAMQNVFTALKKAGLHKRIKVSSTIPL 738
            S IG+ YGR  ++LP+P +    +K     ++++YD++ + L   + T + + I +PN  +   +  Q+ AD W++ +ILPYYP  +I ++ VG E+ + ++ N S  +VPAM+ +  +L+  G+H  IKV + + +
Sbjct:   40 SKIGINYGRRGNNLPSPYQSINFIKSIKAGHVKLYDADPESLTLLSQTNLYVTITVPNHQITALSSNQTIADEWVRTNILPYYPQTQIRFVLVGNEILSYNSGNVSVNLVPAMRKIVNSLRLHGIH-NIKVGTPLAM 175          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: GUB2_HORVU (Lichenase-2 (Fragment) OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.603e-16
Identity = 51/133 (38.35%), Postives = 76/133 (57.14%), Query Frame = 1
Query:  334 TIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNSSSLVVPAMQNVFTALKKAGLHKRIKVSSTI 732
            +IGVCYG +A++LP    V  + K + IK +R+Y  N   L+A   TG+ +++G PN  L   A   + A SW+K++I   YP     Y+ VG EV      +   +VPAM+NV  AL  AGL   IKV++++
Sbjct:    6 SIGVCYGMSANNLPAASTVVSMFKFNGIKSMRLYAPNQAALQAVGGTGINVVVGAPNDVLSNLAASPAAAASWVKSNI-QAYPKVSFRYVCVGNEVAGGATRN---LVPAMKNVHGALVAAGL-GHIKVTTSV 133          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E13E_HORVU (Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.798e-16
Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = 1
Query:  328 GSTIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSD-LLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNSSSLVVPAMQNVFTALKKAGLHKRIKVSSTI 732
            G+  GVCYG   D+LP+   V QL K  NI  +RIY+ + + L A   +G+ L++ +   D +    +  S A  W+++++  YYP   I YI VG EV       + +++ AMQNV  AL  A L   IKVS+ +
Sbjct:    2 GAVHGVCYGMVGDNLPSRSDVVQLYKSRNIHAMRIYNPDQEALTALRGSGIFLILDVGGVDEVRRLGRDPSYAAGWVRSNVQAYYPDVLIRYIAVGNEVPA---GDTGIILLAMQNVHNALASANLSSSIKVSTAV 134          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.798e-16
Identity = 49/127 (38.58%), Postives = 74/127 (58.27%), Query Frame = 1
Query:  337 IGVCYGRNADDLPTPDKVAQ-LVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNAD---SWLKNSILPYYPAAKITYITVGAEVTESTDNSSSL-VVPAMQNVFTALKKAGL 702
            IGV YG NAD+LP+P  VA  L  +  I  ++++D+N   + AFA T + L + +PNS L   A   +  D   SW++ ++ PY PA  +T +  G E+  STD +  L ++PAM+ +  ALK  GL
Sbjct:   26 IGVNYGANADNLPSPTSVATFLATKTTIDRVKLFDANPTFISAFAGTPISLAVSLPNSALPALADKATGLDAARSWIRANLSPYVPATNVTLLLAGNEILLSTDTNLILSLLPAMRRLAQALKAEGL 152          
BLAST of EY756640 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.572e-16
Identity = 48/133 (36.09%), Postives = 78/133 (58.65%), Query Frame = 1
Query:  331 STIGVCYGRNADDLPTPDKVAQLVKQHNIKYLRIYDSNIQVLKAFANTGVELMIGIPNSDLLPFAQFQSNADSWLKNSILPYYPAAKITYITVGAEVTESTDNS-SSLVVPAMQNVFTALKKAGLHKRIKVSS 726
            S+IG+ YG+ A++LP P  V  L+K      +++YD++ Q L+AFA +G EL + + N  L   +     A  W+K ++  Y P  KI  I VG EV  S  ++ ++ + PAMQ++  AL   GL+K+I V++
Sbjct:   25 SSIGINYGQVANNLPPPKNVIPLLKSVGATKVKLYDADPQALRAFAGSGFELTVALGNEYLAQMSD-PIKAQGWVKENVQAYLPNTKIVAIVVGNEVLTSNQSALTAALFPAMQSIHGALVDCGLNKQIFVTT 156          
The following BLAST results are available for this feature:
BLAST of EY756640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
E13L_TOBAC2.781e-1835.61Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13A_HORVU2.781e-1839.55Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vul... [more]
E133_SOLTU1.057e-1737.01Glucan endo-1,3-beta-glucosidase, basic isoform 3 ... [more]
E13B_BRACM1.380e-1735.56Glucan endo-1,3-beta-glucosidase OS=Brassica campe... [more]
E13B_MAIZE6.849e-1739.10Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
EA6_ARATH8.945e-1731.39Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
GUB2_HORVU2.603e-1638.35Lichenase-2 (Fragment) OS=Hordeum vulgare PE=1 SV=... [more]
E13E_HORVU5.798e-1636.03Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vul... [more]
E13B_WHEAT5.798e-1638.58Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E1310_ARATH7.572e-1636.09Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-H11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756640 ID=EY756640; Name=EY756640; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGCTATTGGGCAAGCTCTCTCACTCTATCCCGAGCCCCTCG
AAACAATTTAATTTAAAAAGGTGTCGAAAGAGAGACGTTACTGTCTGTGT
GAGCAGAGCAGAGTGTAACGTTACAAATTAAGCTTAACGGAGTTCAATAA
AAACAAGAGTAAAGTTTAAGACAACGCACACAACAGCAGTCACCGTACAG
TAAGTGGGCTTACTTGAGAGAGAGAGAGTGGGAGGGGAGAGAAAGTTCAG
TTTTTTTAGCAATGGCGAGAGGATTCGAGCTCTTTTTTGCCATTTCACTG
TTGCTTGCGCTTCTGGGTTTGTGCAAAGGAAGTACTATTGGTGTCTGCTA
TGGAAGAAATGCTGATGACCTCCCAACGCCGGATAAAGTTGCACAGTTGG
TTAAACAACATAACATCAAATATCTGAGGATCTATGATTCTAACATCCAG
GTCCTCAAGGCATTTGCAAATACTGGAGTTGAACTCATGATCGGAATTCC
AAATTCAGATTTGTTGCCATTTGCACAGTTCCAATCCAATGCAGATAGCT
GGCTGAAAAACAGCATCCTTCCTTACTACCCAGCTGCAAAAATCACATAT
ATAACTGTTGGTGCTGAAGTCACCGAAAGCACCGATAATTCCTCTTCACT
AGTTGTACCCGCAATGCAAAATGTCTTTACGGCATTAAAGAAAGCTGGCC
TGCATAAAAGGATTAAGGTCTCTAGTACCATTCCCTTGGGGTTCTGTCTC
GATCGTTCCCGCATCTGCAGGGGCCTTTTATAGCANGCATGCACATTTTC
TGAAACCCTTGNTNGGAGTCTTGCTGANTACAGTCACCTTTATGATAGTA
TATATCCGTCTATGCATATGAGATCTCCCACATGTGTCT
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