EY756638

Overview
NameEY756638
Unique NameEY756638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756638 vs. ExPASy Swiss-Prot
Match: GRDH2_ARATH (Glucose and ribitol dehydrogenase homolog 2 OS=Arabidopsis thaliana GN=At3g05260 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11
Identity = 73/252 (28.97%), Postives = 113/252 (44.84%), Query Frame = 1
Query:   85 GMTALVTGGTKGIGYAVVEELAAFGAIV---HTCSRNETELNQRIQ---EWKSK-GLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAYHLSQLAHPLLKXXXXXXXXXXXXVAGVIAIPMCSIA---ASSKGAMNQLTKNLACEWAKDKIRVNSVAPWIIRTPLVDKVLKESTFLEQANRMI-LRTPIPRPGEPTEVSSVVAFL-CFPAASYVTGQVI 804
            G  ALVTGG  GIG AV    A  GA V   +   R + +  + ++   E K++   +    A DL      ++++E V + F G++++L+N A                  V  TN  S + L + A   +K               V+A    S      ++KGA+   T+ LA + A   IRVN VAP  + TPL+      ++F E+A +     TP+ R  +P EV+    FL C   +SY TGQ++
Sbjct:   39 GKVALVTGGDSGIGKAVCHCYALEGASVAFTYVKGREDKDAEETLRLLHEVKTREAKEPIMIATDLGFEENCKRVVEEVVNSF-GRIDVLVNCAAEQHEVSIEDIDEARLERVFRTNIFSQFFLVKYALKHMKEGSSIIN-----TTSVVAYAGNSSLLEYTATKGAIVSFTRGLALQLAPKGIRVNGVAPGPVWTPLI-----PASFSEEAIKQFGSETPMKRAAQPVEVAPSYVFLACNHCSSYYTGQIL 279          
BLAST of EY756638 vs. ExPASy Swiss-Prot
Match: YTKK_BACSU (Putative oxidoreductase ytkK OS=Bacillus subtilis GN=ytkK PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11
Identity = 69/262 (26.34%), Postives = 115/262 (43.89%), Query Frame = 1
Query:   94 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQ----VSGNACDLKIRAQREKLMETVSSQFDGKLNILINNAGTFI--PKXXXXXXXXXXXXVMTTNFESAYHLSQLAHPLLKXXXXXXXXXXXXVAGVIAIPMCSIAA--SSKGAMNQLTKNLACEWAKDKIRVNSVAPWIIRTPLVDKVLKESTFLEQANRMIL---RTPIPRPGEPTEVSSVVAFLCFPAASYVTGQVICVDRGYSITGFSAT 846
            AL+T G+KG+G  V E L A G  V    R + E   R++E     L     V G   D+  +    ++ E   ++F G+++ LINNAG +I   K            ++  N  + +HL +   P+++                 A      +A  ++K  +  LTK +A E A+  I  N V P  I   + +  ++E+       RM +   +TPI R G   +++ ++AFLC   +  VTG VI    G ++   + T
Sbjct:    4 ALITAGSKGLGRKVTETLLAKGYSVTVNYRQDEEAVSRLKEACPDCLDRLQFVKG---DVTKKEDLLRIAEAALNRF-GRIDFLINNAGPYIFERKKLADYTDDEWYGMLEGNLSAVFHLFKAVIPIMRKQQFGRIITYGFQGAAHAPGWLHRSAFGAAKVGLASLTKTIAIEEAEFGITANMVCPGDIVGDMKEASIEEA-------RMRIGKEKTPIGRSGTGEDIARIIAFLCEENSDLVTGTVIEATGGLNVINKNQT 254          
BLAST of EY756638 vs. ExPASy Swiss-Prot
Match: Y0419_STAS1 (Uncharacterized oxidoreductase SSP0419 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0419 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.313e-11
Identity = 48/188 (25.53%), Postives = 91/188 (48.40%), Query Frame = 1
Query:   94 ALVTGGTKGIGYAVVEELAAFGAIVHTCSRNET---ELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAYHLSQLAHPLLKXXXXXXXXXXXXVAGVIAIPMCSIAASSKGAMNQLTKNLACEWAKDKIRVNSVAPWIIRTPL 648
            A+VTG + GIG ++ E LA  G  V    R+E+   E+ +RIQ+ K   ++ S    D+  + +  +L+E    +F G+++IL+N+AG  +              ++  N +   +      P +             ++G       ++ ++SK A++ +T+ L  E AK  +RV S++P ++ TPL
Sbjct:    9 AVVTGASSGIGASIAETLANQGVKVVLTGRDESRLAEVAKRIQDNKQAVVETS--IVDVTHKEEVTELVEKTKEKF-GQIDILVNSAGLMLSSAITEGDVEAWEAMIDVNIKGTLYTINAVLPSMLNQSSGHIINIASISGFEVTKKSTLYSASKAAVHSITQGLEKELAKTGVRVTSISPGMVDTPL 193          
BLAST of EY756638 vs. ExPASy Swiss-Prot
Match: 3BHD_COMTE (3-beta-hydroxysteroid dehydrogenase OS=Comamonas testosteroni PE=1 SV=5)

HSP 1 Score: 67.781 bits (164), Expect = 9.313e-11
Identity = 69/250 (27.60%), Postives = 107/250 (42.80%), Query Frame = 1
Query:   82 KGMTALVTGGTKGIGYAVVEELAAFGAIVHTCSRNETELNQRIQEWKSKGLQVSGNACDLKIRAQREKLMETVSSQFDGKLNILINNAGTFIPKXXXXXXXXXXXXVMTTNFESAYHLSQLAHPLLKXXXXXXXXXXXXVAGVIAIPMCSIAASSKGAMNQLTK--NLACEWAKDKIRVNSVAPWIIRTPLVDKVLKESTFLEQANRMILRTP-IPRPGE---PTEVSSVVAFLCFPAASYVTGQVICVD 813
            +G  ALVTGG  G+G  VV+ L   GA V     NE    Q   E   + + V     D+   A    +M  V  +  G LN+L+NNAG  +P             ++  N ES +   Q     +K            V+  + I   +  ++SK A++ LT+   L+C      IRVNS+ P  I TP++   L +      +  M+L  P + R G    P  ++ +V FL    +S ++G  +  D
Sbjct:    6 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRH---DVSSEADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMK-ETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGV----SKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHAD 246          
The following BLAST results are available for this feature:
BLAST of EY756638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 174
Match NameE-valueIdentityDescription
GRDH2_ARATH5.460e-1128.97Glucose and ribitol dehydrogenase homolog 2 OS=Ara... [more]
YTKK_BACSU7.131e-1126.34Putative oxidoreductase ytkK OS=Bacillus subtilis ... [more]
Y0419_STAS19.313e-1125.53Uncharacterized oxidoreductase SSP0419 OS=Staphylo... [more]
3BHD_COMTE9.313e-1127.603-beta-hydroxysteroid dehydrogenase OS=Comamonas t... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-H09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756638 ID=EY756638; Name=EY756638; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGGTTGCTTTTTCGCCTTCTACCAATAGGGGGAAAAAAAAT
GTCAGATTTTAGAGAGAAAAGATTGTCTCCCAAGGGTATGACCGCCCTTG
TCACAGGTGGAACCAAAGGCATCGGATATGCCGTAGTAGAAGAACTAGCA
GCATTTGGAGCAATAGTTCATACATGTTCCCGTAACGAAACAGAGCTCAA
TCAAAGAATTCAAGAATGGAAGAGTAAGGGGCTTCAAGTGAGTGGCAATG
CATGTGACCTGAAAATTAGAGCTCAGCGAGAGAAGCTGATGGAGACTGTC
TCGTCTCAGTTTGATGGCAAGCTCAACATCCTTATTAACAATGCTGGAAC
CTTCATACCTAAGGAAACCACAGAATTTACCGAGGAGGATTTCTCAACTG
TAATGACTACCAATTTTGAGTCTGCTTATCATCTGTCTCAACTTGCACAC
CCCCTCTTAAAATCATCAGGAAATGGAAACATCATATTTATATCCTCTGT
TGCAGGCGTTATTGCTATACCAATGTGTTCCATCGCAGCATCGAGTAAAG
GGGCGATGAATCAACTCACAAAGAACTTGGCATGCGAGTGGGCAAAAGAC
AAAATTCGTGTTAATTCAGTTGCACCATGGATCATTAGAACCCCACTCGT
TGATAAAGTATTGAAAGAATCTACGTTTCTGGAACAAGCAAATCGCATGA
TACTCCGTACTCCTATCCCCCGACCTGGAGAACCTACTGAGGTTTCATCG
GTGGTGGCATTCCTATGCTTCCCAGCTGCTTCATATGTCACCGGGCAGGT
TATTTGTGTTGACCGTGGATACTCTATCACTGGGTTTAGCGCCACGGCAC
CCGAAATTATCTTTGGAACGTCT
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