EY756621

Overview
NameEY756621
Unique NameEY756621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_SHEDO (Glycine cleavage system H protein OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=gcvH PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.273e-18
Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 273
            FVELPE G SV  G    V ESVKA SD+ +PISGEV+ VN+ L ++P LVNS  Y +GW  ++ PS  S++++L+D + Y    +E
Sbjct:   42 FVELPEVGDSVSAGAECAVAESVKAASDIYAPISGEVVAVNSSLEDSPELVNSDAYGDGWFFRIMPSDESEVDALLDAEGYQDVIDE 128          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_PHEZH (Glycine cleavage system H protein OS=Phenylobacterium zucineum (strain HLK1) GN=gcvH PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.273e-18
Identity = 44/86 (51.16%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKF 264
            V FVE+PE G  VK G  F VVESVKA SDV +P++GEV+E N  L+  P  VN+ P   GW  KV+ + P++L+ LMD  AY  F
Sbjct:   32 VVFVEVPEVGRQVKAGDAFAVVESVKAASDVYAPVTGEVVEANEALSGAPETVNAEPEAGGWFAKVRVADPAELDGLMDKAAYDAF 117          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_MARAV (Glycine cleavage system H protein OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=gcvH PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.273e-18
Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            V ++ +PE GA+V  G   GV ESVK+ SDV SP++GEVIE+N KL + P +VN  PY +GW+ KVK +   +LE LMD  AY +    E
Sbjct:   40 VVYIGVPEMGATVNGGEEAGVAESVKSASDVFSPVTGEVIEINEKLEDEPEIVNEDPYGDGWMFKVKLADEGELEGLMDAAAYAEHVAAE 129          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_LARHH (Glycine cleavage system H protein OS=Laribacter hongkongensis (strain HLHK9) GN=gcvH PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.273e-18
Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTK 261
            ++ELP  G  + +G G GVVESVKA SDV +PI+GEV+EVN  L   P  VN+ PY  GW  K+K  +P+D+ SL+D  AY K
Sbjct:   42 YIELPAVGQVLAEGDGAGVVESVKAASDVYAPIAGEVLEVNADLESAPETVNADPYGAGWFFKLKLVNPADMASLLDAAAYEK 124          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_DROME (Glycine cleavage system H protein, mitochondrial OS=Drosophila melanogaster GN=ppl PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.273e-18
Identity = 45/86 (52.33%), Postives = 58/86 (67.44%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKF 264
            V F +LPE G  +KQ    G +ESVKA S+V SP+SG+VIE N ++ +TP LVNSS YE+GWL KV   +P +LE+LM    Y  F
Sbjct:   73 VVFAQLPEPGTELKQDDECGALESVKAASEVYSPVSGKVIEKNAEVEDTPALVNSSCYEKGWLFKVDLKNPKELEALMTEDQYKAF 158          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_SODGM (Glycine cleavage system H protein OS=Sodalis glossinidius (strain morsitans) GN=gcvH PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.969e-18
Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEEN 279
            F++LPE GA+   G    V ESVKA SD+ +PISGE++ VN  L  +P LVNS+PY +GWL K+K +  S++  L+D  AY    +EE+
Sbjct:   42 FMDLPEVGATFSAGEDCAVAESVKAASDIYAPISGEIVAVNDDLEASPELVNSAPYTDGWLFKIKATDDSEVNELLDAAAYQAAIDEED 130          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_NITOC (Glycine cleavage system H protein OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=gcvH PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.969e-18
Identity = 39/88 (44.32%), Postives = 60/88 (68.18%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            ++ELPE G +V+      V+ESVKA SDV +P+ GE+IEVNT LT+ P L+N   Y++GWL +++P++ +DL+ L+D + Y      E
Sbjct:   42 YIELPEVGTTVRASVECMVIESVKAASDVYAPVEGEIIEVNTSLTDQPELINQKSYDDGWLFRLRPNNTADLDRLLDAKGYADMIAAE 129          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ALKOO (Glycine cleavage system H protein OS=Alkaliphilus oremlandii (strain OhILAs) GN=gcvH PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.969e-18
Identity = 44/88 (50.00%), Postives = 60/88 (68.18%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FVELPE    + QG  F VVESVKA SD  SP+SG+V+EVN +L   P L+N   +   W+IKV+ ++PS+LE L+  + Y +FCE+E
Sbjct:   40 FVELPEVDDEIAQGDAFSVVESVKAASDAYSPVSGKVLEVNEELDGAPELLNEDAF-ANWIIKVELTNPSELEGLLSDKEYAEFCEKE 126          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_VIBFM (Glycine cleavage system H protein OS=Vibrio fischeri (strain MJ11) GN=gcvH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.878e-18
Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            V FV+LP+    V  G GF +VESVKA SD+ SP++G ++E+N +L ++P  VN  PYE GW+ ++K S  S+LESL+    Y +  +EE
Sbjct:   37 VVFVDLPDVDDEVTAGEGFSLVESVKAASDIYSPVTGVIVEINEELEDSPEQVNEEPYESGWIARIKLSDSSELESLIPSDTYLESLDEE 126          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_STAAW (Glycine cleavage system H protein OS=Staphylococcus aureus (strain MW2) GN=gcvH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.878e-18
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 273
            FVELPET   + +G  FG VESVK  S++ +PISG+V+EVN +L ++P  VN SPYE+ W++KV+ S  S +E+L+  + Y++   E
Sbjct:   40 FVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE 126          
The following BLAST results are available for this feature:
BLAST of EY756621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
GCSH_SHEDO2.273e-1848.28Glycine cleavage system H protein OS=Shewanella de... [more]
GCSH_PHEZH2.273e-1851.16Glycine cleavage system H protein OS=Phenylobacter... [more]
GCSH_MARAV2.273e-1848.89Glycine cleavage system H protein OS=Marinobacter ... [more]
GCSH_LARHH2.273e-1851.81Glycine cleavage system H protein OS=Laribacter ho... [more]
GCSH_DROME2.273e-1852.33Glycine cleavage system H protein, mitochondrial O... [more]
GCSH_SODGM2.969e-1847.19Glycine cleavage system H protein OS=Sodalis gloss... [more]
GCSH_NITOC2.969e-1844.32Glycine cleavage system H protein OS=Nitrosococcus... [more]
GCSH_ALKOO2.969e-1850.00Glycine cleavage system H protein OS=Alkaliphilus ... [more]
GCSH_VIBFM3.878e-1845.56Glycine cleavage system H protein OS=Vibrio fische... [more]
GCSH_STAAW3.878e-1847.13Glycine cleavage system H protein OS=Staphylococcu... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-G03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756621 ID=EY756621; Name=EY756621; organism=Citrus sinensis; type=EST; length=428bp
CCACGCGTCCGGTTTGTGGAGCTGCCAGAAACTGGTGCCTCAGTCAAACA
AGGCGGCGGCTTCGGGGTTGTAGAAAGTGTGAAAGCAACCAGTGACGTTA
ATTCCCCCATTTCTGGTGAAGTTATTGAGGTTAACACCAAGCTCACTGAA
ACGCCTGGCTTGGTCAATTCAAGCCCATATGAAGAAGGATGGCTGATAAA
GGTGAAGCCTAGCAGCCCTTCGGATTTAGAATCCTTGATGGATCCACAGG
CTTACACGAAATTTTGCGAAGAAGAAAATGCAGCTCATTAGAATCTTCAC
ATTGTTTCATTTTCTTTTCCCAAAACATACTAATAAATCTCTTTGTTTTA
CTCGCTATGTGTGTTGTAATTCTGCATCTTCATGTAATTAAGACCCATTT
CTCCAAAAAAAAAAAAAAAAAAAAAAAA
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