EY756621

Overview
NameEY756621
Unique NameEY756621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_STRM5 (Glycine cleavage system H protein OS=Stenotrophomonas maltophilia (strain R551-3) GN=gcvH PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.638e-18
Identity = 41/89 (46.07%), Postives = 59/89 (66.29%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEEN 279
            +VELPE GA+ K      VVESVKA SDV SP+SG ++EVN+ L++ P  +N   Y +GW+  V+ S+  +L  L+DP AY +  E+E+
Sbjct:   42 YVELPEVGATAKANEQIAVVESVKAASDVYSPVSGTIVEVNSALSDKPETINEDAYGDGWMYVVELSNAEELNELLDPDAYAEALEDED 130          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_BACLD (Glycine cleavage system H protein OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=gcvH PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.638e-18
Identity = 42/88 (47.73%), Postives = 59/88 (67.05%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FVELPE G  +K    FG VESVK  S++ +PI+G+V+EVN  L ++P  VN SPYE+ W+I V+PS  S++E+LM    Y    +E+
Sbjct:   40 FVELPEVGDEIKADEPFGSVESVKTVSELYAPINGKVVEVNEDLEDSPEFVNESPYEKAWMIVVEPSDASEIENLMTAGQYEDMIKED 127          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_BACA2 (Glycine cleavage system H protein OS=Bacillus amyloliquefaciens (strain FZB42) GN=gcvH PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.638e-18
Identity = 41/88 (46.59%), Postives = 59/88 (67.05%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FVELPE GA +K    FG VESVK  S++ +PI+G V EVN  L ++P  VN SPYE+ W+I V+P+   ++E+LM  + Y +  +E+
Sbjct:   40 FVELPEVGAEIKADEPFGSVESVKTVSELYAPINGTVTEVNEDLDDSPEFVNESPYEKAWMIVVEPADAEEIENLMTSEQYDEMTQED 127          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ALISL (Glycine cleavage system H protein OS=Aliivibrio salmonicida (strain LFI1238) GN=gcvH PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.638e-18
Identity = 42/90 (46.67%), Postives = 59/90 (65.56%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            V FV+LP+    V  G  F +VESVKA SD+ +PISG ++E+N +L ++P LVN  PYE GW+ ++K S   DLE+L+    Y +  EEE
Sbjct:   37 VVFVDLPDVDDEVTAGENFSLVESVKAASDIYAPISGVIVEINEELEDSPELVNEEPYEGGWIARIKLSDDGDLENLIPGDQYLESIEEE 126          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ALHEH (Glycine cleavage system H protein OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=gcvH PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.638e-18
Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FVE P  G          VVESVKA SD+ +P+ GEVIE N++L ++P LVN+ PY EGW+++++P    DLE L+DP+ Y     +E
Sbjct:   42 FVETPTVGRHYDAEEACAVVESVKAASDIYAPVGGEVIEANSELQDSPELVNTDPYGEGWIMRIRPDDSDDLEQLLDPEDYQDLVADE 129          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_STAES (Glycine cleavage system H protein OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gcvH PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.128e-17
Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 273
            FVELPET   + +G  FG VESVK  S++ +PISG+++EVN +L ++P  VN SPYE+ W++K++ S  S LE L+    Y++   E
Sbjct:   40 FVELPETDDELNEGDTFGSVESVKTVSELYAPISGKIVEVNEELEDSPEFVNESPYEKAWMVKIEISDDSQLEELLSADQYSEMIGE 126          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_STAEQ (Glycine cleavage system H protein OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gcvH PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.128e-17
Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 273
            FVELPET   + +G  FG VESVK  S++ +PISG+++EVN +L ++P  VN SPYE+ W++K++ S  S LE L+    Y++   E
Sbjct:   40 FVELPETDDELNEGDTFGSVESVKTVSELYAPISGKIVEVNEELEDSPEFVNESPYEKAWMVKIEISDDSQLEELLSADQYSEMIGE 126          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ALCBS (Glycine cleavage system H protein OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gcvH PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.128e-17
Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            +VELPE G  V  G   GVVESVKA SD+ SP+SGE++E+N  L + P LVN+ PYE GWL KV+ +   +L+SL+    Y    + E
Sbjct:   41 YVELPEVGQVVAAGDETGVVESVKAASDIYSPVSGEIVEINEALEDEPELVNNVPYEGGWLFKVQLTDEGELDSLLTADQYQAQIDSE 128          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_PROMH (Glycine cleavage system H protein OS=Proteus mirabilis (strain HI4320) GN=gcvH PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.473e-17
Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LP+ G+ V  G    V ESVKA SD+ +P+SGE+I VN +L  +P LVNS PY +GWL ++K    S+L  L+D   Y +  E E
Sbjct:   42 FVDLPDVGSEVDLGDDCAVAESVKAASDIYAPLSGEIIAVNEELDGSPELVNSDPYGDGWLFRIKAKDESELNDLLDAAGYQELVENE 129          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_BACFN (Glycine cleavage system H protein OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=gcvH PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.473e-17
Identity = 39/81 (48.15%), Postives = 57/81 (70.37%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAY 255
            FV++P  G +++ G  FG +E VK  SD+  P++GEV+E N  L E P LVN  PY EGWLIK+KP++ +DL++L+D + Y
Sbjct:   40 FVDIPTEGETLEAGEVFGTIEVVKTISDLFLPVAGEVVEQNPALEENPELVNKDPYGEGWLIKMKPANAADLDNLLDAEGY 120          
The following BLAST results are available for this feature:
BLAST of EY756621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
GCSH_STRM58.638e-1846.07Glycine cleavage system H protein OS=Stenotrophomo... [more]
GCSH_BACLD8.638e-1847.73Glycine cleavage system H protein OS=Bacillus lich... [more]
GCSH_BACA28.638e-1846.59Glycine cleavage system H protein OS=Bacillus amyl... [more]
GCSH_ALISL8.638e-1846.67Glycine cleavage system H protein OS=Aliivibrio sa... [more]
GCSH_ALHEH8.638e-1845.45Glycine cleavage system H protein OS=Alkalilimnico... [more]
GCSH_STAES1.128e-1745.98Glycine cleavage system H protein OS=Staphylococcu... [more]
GCSH_STAEQ1.128e-1745.98Glycine cleavage system H protein OS=Staphylococcu... [more]
GCSH_ALCBS1.128e-1748.86Glycine cleavage system H protein OS=Alcanivorax b... [more]
GCSH_PROMH1.473e-1746.59Glycine cleavage system H protein OS=Proteus mirab... [more]
GCSH_BACFN1.473e-1748.15Glycine cleavage system H protein OS=Bacteroides f... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-G03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756621 ID=EY756621; Name=EY756621; organism=Citrus sinensis; type=EST; length=428bp
CCACGCGTCCGGTTTGTGGAGCTGCCAGAAACTGGTGCCTCAGTCAAACA
AGGCGGCGGCTTCGGGGTTGTAGAAAGTGTGAAAGCAACCAGTGACGTTA
ATTCCCCCATTTCTGGTGAAGTTATTGAGGTTAACACCAAGCTCACTGAA
ACGCCTGGCTTGGTCAATTCAAGCCCATATGAAGAAGGATGGCTGATAAA
GGTGAAGCCTAGCAGCCCTTCGGATTTAGAATCCTTGATGGATCCACAGG
CTTACACGAAATTTTGCGAAGAAGAAAATGCAGCTCATTAGAATCTTCAC
ATTGTTTCATTTTCTTTTCCCAAAACATACTAATAAATCTCTTTGTTTTA
CTCGCTATGTGTGTTGTAATTCTGCATCTTCATGTAATTAAGACCCATTT
CTCCAAAAAAAAAAAAAAAAAAAAAAAA
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