EY756621 | Citrus Genome Database

Overview


Name	EY756621
Unique Name	EY756621
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	428

Libraries


Library Name	Type
Sweet orange leaf, field plant B	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ECOHS (Glycine cleavage system H protein OS=Escherichia coli O9:H4 (strain HS) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.347e-21
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 1

Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+++P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129

[Close]

BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ECODH (Glycine cleavage system H protein OS=Escherichia coli (strain K12 / DH10B) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.347e-21
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 1

Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+++P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129

[Close]

BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ECOBW (Glycine cleavage system H protein OS=Escherichia coli (strain K12 / BW2952) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.347e-21
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 1

Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+++P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129

[Close]

BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ECO8A (Glycine cleavage system H protein OS=Escherichia coli O8 (strain IAI1) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.347e-21
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 1

Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+++P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129

[Close]

BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ECO81 (Glycine cleavage system H protein OS=Escherichia coli O81 (strain ED1a) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.347e-21
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 1

Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+++P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129

[Close]

BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ECO5E (Glycine cleavage system H protein OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.347e-21
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 1

Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+++P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129

[Close]

BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ECO57 (Glycine cleavage system H protein OS=Escherichia coli O157:H7 GN=gcvH PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 8.347e-21
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 1

Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+++P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129

[Close]

BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ECO55 (Glycine cleavage system H protein OS=Escherichia coli (strain 55989 / EAEC) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.347e-21
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 1

Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+++P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129

[Close]

BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ECO45 (Glycine cleavage system H protein OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.347e-21
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 1

Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+++P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129

[Close]

BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ECO27 (Glycine cleavage system H protein OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.347e-21
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 1

Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+++P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129

The following BLAST results are available for this feature:

BLAST of EY756621 vs. ExPASy Swiss-Prot

BLAST of EY756621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433


Match Name	E-value	Identity	Description
GCSH_ECOHS	8.347e-21	52.27	Glycine cleavage system H protein OS=Escherichia c...	[more]
GCSH_ECODH	8.347e-21	52.27	Glycine cleavage system H protein OS=Escherichia c...	[more]
GCSH_ECOBW	8.347e-21	52.27	Glycine cleavage system H protein OS=Escherichia c...	[more]
GCSH_ECO8A	8.347e-21	52.27	Glycine cleavage system H protein OS=Escherichia c...	[more]
GCSH_ECO81	8.347e-21	52.27	Glycine cleavage system H protein OS=Escherichia c...	[more]
GCSH_ECO5E	8.347e-21	52.27	Glycine cleavage system H protein OS=Escherichia c...	[more]
GCSH_ECO57	8.347e-21	52.27	Glycine cleavage system H protein OS=Escherichia c...	[more]
GCSH_ECO55	8.347e-21	52.27	Glycine cleavage system H protein OS=Escherichia c...	[more]
GCSH_ECO45	8.347e-21	52.27	Glycine cleavage system H protein OS=Escherichia c...	[more]
GCSH_ECO27	8.347e-21	52.27	Glycine cleavage system H protein OS=Escherichia c...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS13-C1-001-010-G03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY756621 ID=EY756621; Name=EY756621; organism=Citrus sinensis; type=EST; length=428bp
CCACGCGTCCGGTTTGTGGAGCTGCCAGAAACTGGTGCCTCAGTCAAACA
AGGCGGCGGCTTCGGGGTTGTAGAAAGTGTGAAAGCAACCAGTGACGTTA
ATTCCCCCATTTCTGGTGAAGTTATTGAGGTTAACACCAAGCTCACTGAA
ACGCCTGGCTTGGTCAATTCAAGCCCATATGAAGAAGGATGGCTGATAAA
GGTGAAGCCTAGCAGCCCTTCGGATTTAGAATCCTTGATGGATCCACAGG
CTTACACGAAATTTTGCGAAGAAGAAAATGCAGCTCATTAGAATCTTCAC
ATTGTTTCATTTTCTTTTCCCAAAACATACTAATAAATCTCTTTGTTTTA
CTCGCTATGTGTGTTGTAATTCTGCATCTTCATGTAATTAAGACCCATTT
CTCCAAAAAAAAAAAAAAAAAAAAAAAA