EY756621

Overview
NameEY756621
Unique NameEY756621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_YERPB (Glycine cleavage system H protein OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=gcvH PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 7.067e-20
Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 273
            FV+LPE G+ V  G    V ESVKA SD+ +PISGE++ VNT+L  +P LVNS+PY +GWL  +K +  S+L++L+D  AY    EE
Sbjct:   42 FVDLPEVGSDVSAGSDCAVAESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDADAYLAAIEE 128          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_YERPA (Glycine cleavage system H protein OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=gcvH PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 7.067e-20
Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 273
            FV+LPE G+ V  G    V ESVKA SD+ +PISGE++ VNT+L  +P LVNS+PY +GWL  +K +  S+L++L+D  AY    EE
Sbjct:   42 FVDLPEVGSDVSAGSDCAVAESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDADAYLAAIEE 128          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_YERP3 (Glycine cleavage system H protein OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=gcvH PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 7.067e-20
Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEE 273
            FV+LPE G+ V  G    V ESVKA SD+ +PISGE++ VNT+L  +P LVNS+PY +GWL  +K +  S+L++L+D  AY    EE
Sbjct:   42 FVDLPEVGSDVSAGSDCAVAESVKAASDIYAPISGEIVAVNTELENSPELVNSAPYTDGWLFSIKAADESELDNLLDADAYLAAIEE 128          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_KLEP3 (Glycine cleavage system H protein OS=Klebsiella pneumoniae (strain 342) GN=gcvH PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 7.067e-20
Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V+ G    V ESVKA SD+ +PISGE++ VN +L ++P LVNS PY +GW+ K+K S  + + +L+D  AY    E+E
Sbjct:   42 FVDLPEVGATVEAGADCAVAESVKAASDIYAPISGEIVAVNEELNDSPELVNSDPYSDGWIFKIKASDEAQVAALLDATAYEALLEDE 129          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_THET2 (Glycine cleavage system H protein OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=gcvH PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 9.229e-20
Identity = 43/90 (47.78%), Postives = 60/90 (66.67%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            V +VELPE G  V++G    VVESVK  SD+ +P++GE++EVN  L +TP LVN  PY EGW+ ++KP    DL+ L+D + Y +  E E
Sbjct:   38 VVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPELVNQDPYGEGWIFRLKPRDMGDLDELLDAEGYQEVLESE 127          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_SHEAM (Glycine cleavage system H protein OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gcvH PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 9.229e-20
Identity = 46/88 (52.27%), Postives = 59/88 (67.05%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FVELPE G +V  G    V ESVKA SD+ +PISGEVI VN  L ++P LVNS  Y +GW  ++KPS  S+L+SL+D + Y    +EE
Sbjct:   42 FVELPEVGDTVSAGEDCAVAESVKAASDIYAPISGEVIAVNESLEDSPELVNSDAYGDGWFFRIKPSDESELDSLLDAEGYQAVIDEE 129          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_KLEP7 (Glycine cleavage system H protein OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=gcvH PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 9.229e-20
Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V+ G    V ESVKA SD+ +PISGE++ VN +L ++P LVNS PY +GW+ K+K S  + + +L+D  AY    E+E
Sbjct:   42 FVDLPEVGATVEAGADCAVAESVKAASDIYAPISGEIVAVNEELNDSPELVNSDPYTDGWIFKIKASDEAQVAALLDAAAYEALLEDE 129          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ERWCT (Glycine cleavage system H protein OS=Erwinia carotovora subsp. atroseptica GN=gcvH PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 9.229e-20
Identity = 45/88 (51.14%), Postives = 59/88 (67.05%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            F++LPE G  V  G    V ESVKA SD+ +PISGEV+EVN  L  +P LVNS+PY +GWL ++K S  SDL+ L+D + Y    EE+
Sbjct:   42 FIDLPEVGTVVAAGDDCAVAESVKAASDIYAPISGEVVEVNEDLENSPELVNSAPYTDGWLFRIKISDESDLDELLDAEGYQASLEED 129          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_CITK8 (Glycine cleavage system H protein OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gcvH PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 9.229e-20
Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LP+ GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+++P LVNS PY  GW+ K+K S  S+++SL+D  AY    E+E
Sbjct:   42 FVDLPDVGATVAAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESEIDSLLDATAYEALLEDE 129          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_XANP2 (Glycine cleavage system H protein OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=gcvH PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.205e-19
Identity = 46/88 (52.27%), Postives = 64/88 (72.73%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCE 270
            V FVELPE G  V +GG   VVESVKA S+V +P+SGEV+EVN++L   PGLVN +P  +GW +K+K S+P++L+ L++  AY  F +
Sbjct:   35 VVFVELPEIGKVVTKGGEAAVVESVKAASEVYAPLSGEVVEVNSELEGAPGLVNEAPEGKGWFMKLKLSNPAELDELLNEHAYKDFLD 122          
The following BLAST results are available for this feature:
BLAST of EY756621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
GCSH_YERPB7.067e-2050.57Glycine cleavage system H protein OS=Yersinia pseu... [more]
GCSH_YERPA7.067e-2050.57Glycine cleavage system H protein OS=Yersinia pest... [more]
GCSH_YERP37.067e-2050.57Glycine cleavage system H protein OS=Yersinia pseu... [more]
GCSH_KLEP37.067e-2048.86Glycine cleavage system H protein OS=Klebsiella pn... [more]
GCSH_THET29.229e-2047.78Glycine cleavage system H protein OS=Thermus therm... [more]
GCSH_SHEAM9.229e-2052.27Glycine cleavage system H protein OS=Shewanella am... [more]
GCSH_KLEP79.229e-2048.86Glycine cleavage system H protein OS=Klebsiella pn... [more]
GCSH_ERWCT9.229e-2051.14Glycine cleavage system H protein OS=Erwinia carot... [more]
GCSH_CITK89.229e-2048.86Glycine cleavage system H protein OS=Citrobacter k... [more]
GCSH_XANP21.205e-1952.27Glycine cleavage system H protein OS=Xanthobacter ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-G03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756621 ID=EY756621; Name=EY756621; organism=Citrus sinensis; type=EST; length=428bp
CCACGCGTCCGGTTTGTGGAGCTGCCAGAAACTGGTGCCTCAGTCAAACA
AGGCGGCGGCTTCGGGGTTGTAGAAAGTGTGAAAGCAACCAGTGACGTTA
ATTCCCCCATTTCTGGTGAAGTTATTGAGGTTAACACCAAGCTCACTGAA
ACGCCTGGCTTGGTCAATTCAAGCCCATATGAAGAAGGATGGCTGATAAA
GGTGAAGCCTAGCAGCCCTTCGGATTTAGAATCCTTGATGGATCCACAGG
CTTACACGAAATTTTGCGAAGAAGAAAATGCAGCTCATTAGAATCTTCAC
ATTGTTTCATTTTCTTTTCCCAAAACATACTAATAAATCTCTTTGTTTTA
CTCGCTATGTGTGTTGTAATTCTGCATCTTCATGTAATTAAGACCCATTT
CTCCAAAAAAAAAAAAAAAAAAAAAAAA
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