EY756621

Overview
NameEY756621
Unique NameEY756621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9822 contig Csv1_Contig9822:280..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_LEGPL (Glycine cleavage system H protein OS=Legionella pneumophila (strain Lens) GN=gcvH PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.205e-19
Identity = 47/89 (52.81%), Postives = 57/89 (64.04%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEEN 279
            FVELPE G  V  G   GVVESVKA SD  +PISG V  VN  + + P LVN  PY EGWL+K+KPS P +++SL+  + Y     EEN
Sbjct:   37 FVELPEIGDEVSAGQELGVVESVKAASDFYAPISGVVTAVNEAVGKNPALVNHDPYHEGWLVKLKPSHPDEIKSLLSDEQYQNEIAEEN 125          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_LEGPH (Glycine cleavage system H protein OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=gcvH PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.205e-19
Identity = 47/89 (52.81%), Postives = 57/89 (64.04%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEEN 279
            FVELPE G  V  G   GVVESVKA SD  +PISG V  VN  + + P LVN  PY EGWL+K+KPS P +++SL+  + Y     EEN
Sbjct:   37 FVELPEIGDEVSAGQELGVVESVKAASDFYAPISGVVTAVNEAVGKNPALVNHDPYHEGWLVKLKPSHPDEIKSLLSDEQYQNEIAEEN 125          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_LEGPC (Glycine cleavage system H protein OS=Legionella pneumophila (strain Corby) GN=gcvH PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.205e-19
Identity = 47/89 (52.81%), Postives = 57/89 (64.04%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEEN 279
            FVELPE G  V  G   GVVESVKA SD  +PISG V  VN  + + P LVN  PY EGWL+K+KPS P +++SL+  + Y     EEN
Sbjct:   37 FVELPEIGDEVSAGQELGVVESVKAASDFYAPISGVVTAVNEAVGKNPALVNHDPYHEGWLVKLKPSHPDEIKSLLSDEQYQNEIAEEN 125          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_LEGPA (Glycine cleavage system H protein OS=Legionella pneumophila (strain Paris) GN=gcvH PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.205e-19
Identity = 47/89 (52.81%), Postives = 57/89 (64.04%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEEN 279
            FVELPE G  V  G   GVVESVKA SD  +PISG V  VN  + + P LVN  PY EGWL+K+KPS P +++SL+  + Y     EEN
Sbjct:   37 FVELPEIGDEVSAGQELGVVESVKAASDFYAPISGVVTAVNEAVGKNPALVNHDPYHEGWLVKLKPSHPDEIKSLLSDEQYQNEIAEEN 125          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_HUMAN (Glycine cleavage system H protein, mitochondrial OS=Homo sapiens GN=GCSH PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.205e-19
Identity = 45/86 (52.33%), Postives = 60/86 (69.77%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKF 264
            V +  LPE G  + +   FG +ESVKA S++ SP+SGEV E+N  L E PGLVN S YE+GWLIK+  S+PS+L+ LM  +AY K+
Sbjct:   82 VVYCSLPEVGTKLNKQDEFGALESVKAASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKY 167          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_AERPE (Probable glycine cleavage system H protein OS=Aeropyrum pernix GN=gcvH PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.205e-19
Identity = 40/82 (48.78%), Postives = 57/82 (69.51%), Query Frame = 1
Query:   16 VELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTK 261
            VELPE G  VK+G     VES+KAT+D+ +P+SGE+++VN KL + P L+N  PY EGW+ K+K   P + ESL+ P+ Y +
Sbjct:   55 VELPEKGRKVKKGEAVATVESIKATADIYAPLSGEIVDVNEKLLDQPELINDDPYGEGWIFKIKVEDPGEFESLLTPEQYVE 136          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_ALTMD (Glycine cleavage system H protein OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=gcvH PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.574e-19
Identity = 45/88 (51.14%), Postives = 59/88 (67.05%), Query Frame = 1
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FVELP+ G +V  G    V ESVKA SDV +PISGEV+EVN  L ++P LVNS PY +GWL K+K    +++E L+D + Y    +EE
Sbjct:   42 FVELPDVGDAVSTGDDICVAESVKAASDVYAPISGEVVEVNEDLEDSPELVNSDPYGDGWLFKIKADDAAEVEGLLDAEGYENSIDEE 129          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_THEMA (Glycine cleavage system H protein OS=Thermotoga maritima GN=gcvH PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.056e-19
Identity = 44/90 (48.89%), Postives = 61/90 (67.78%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            V +V+LPE G  VK+G     +ESVKA +DV +P+SG+++EVN KL   P L+N  P  EGWL K++ S   +LE L+D QAY +FC +E
Sbjct:   35 VVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEISDEGELEDLLDEQAYQEFCAQE 124          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_BOVIN (Glycine cleavage system H protein, mitochondrial OS=Bos taurus GN=GCSH PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.056e-19
Identity = 45/86 (52.33%), Postives = 60/86 (69.77%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKF 264
            V +  LPE G  + +   FG +ESVKA S++ SP+SGEV E+N  L E PGLVN S YE+GWLIK+  S+PS+L+ LM  +AY K+
Sbjct:   82 VVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKALAENPGLVNKSCYEDGWLIKMTFSNPSELDELMSEEAYEKY 167          
BLAST of EY756621 vs. ExPASy Swiss-Prot
Match: GCSH_VIBCM (Glycine cleavage system H protein OS=Vibrio cholerae serotype O1 (strain M66-2) GN=gcvH PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.685e-19
Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 1
Query:    7 VRFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNTKLTETPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            V FVELPE  A +  G  F +VESVKA SD+ +P++G VIEVN  L  +P L+N  PY+ GW++KVK S P +L+ L D + Y    EE+
Sbjct:   37 VVFVELPEIDAEIDAGDSFSLVESVKAASDIYAPVTGVVIEVNEDLQNSPELINEEPYDGGWIVKVKMSDPDELKDLKDAEEYLASIEED 126          
The following BLAST results are available for this feature:
BLAST of EY756621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
GCSH_LEGPL1.205e-1952.81Glycine cleavage system H protein OS=Legionella pn... [more]
GCSH_LEGPH1.205e-1952.81Glycine cleavage system H protein OS=Legionella pn... [more]
GCSH_LEGPC1.205e-1952.81Glycine cleavage system H protein OS=Legionella pn... [more]
GCSH_LEGPA1.205e-1952.81Glycine cleavage system H protein OS=Legionella pn... [more]
GCSH_HUMAN1.205e-1952.33Glycine cleavage system H protein, mitochondrial O... [more]
GCSH_AERPE1.205e-1948.78Probable glycine cleavage system H protein OS=Aero... [more]
GCSH_ALTMD1.574e-1951.14Glycine cleavage system H protein OS=Alteromonas m... [more]
GCSH_THEMA2.056e-1948.89Glycine cleavage system H protein OS=Thermotoga ma... [more]
GCSH_BOVIN2.056e-1952.33Glycine cleavage system H protein, mitochondrial O... [more]
GCSH_VIBCM2.685e-1948.89Glycine cleavage system H protein OS=Vibrio choler... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-G03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756621 ID=EY756621; Name=EY756621; organism=Citrus sinensis; type=EST; length=428bp
CCACGCGTCCGGTTTGTGGAGCTGCCAGAAACTGGTGCCTCAGTCAAACA
AGGCGGCGGCTTCGGGGTTGTAGAAAGTGTGAAAGCAACCAGTGACGTTA
ATTCCCCCATTTCTGGTGAAGTTATTGAGGTTAACACCAAGCTCACTGAA
ACGCCTGGCTTGGTCAATTCAAGCCCATATGAAGAAGGATGGCTGATAAA
GGTGAAGCCTAGCAGCCCTTCGGATTTAGAATCCTTGATGGATCCACAGG
CTTACACGAAATTTTGCGAAGAAGAAAATGCAGCTCATTAGAATCTTCAC
ATTGTTTCATTTTCTTTTCCCAAAACATACTAATAAATCTCTTTGTTTTA
CTCGCTATGTGTGTTGTAATTCTGCATCTTCATGTAATTAAGACCCATTT
CTCCAAAAAAAAAAAAAAAAAAAAAAAA
back to top