CX286791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286791 vs. ExPASy Swiss-Prot
Match: ROC3_NICSY (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.318e-12 Identity = 33/78 (42.31%), Postives = 50/78 (64.10%), Query Frame = 2 Query: 248 RVYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITEK 481 R+Y+GNIP +ID+ L ++ EHG V A V++D+ +GRSR F FV M + + + I L+G + GR I+VN E+ Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEE 269 HSP 2 Score: 69.707 bits (169), Expect = 8.543e-12 Identity = 32/74 (43.24%), Postives = 52/74 (70.27%), Query Frame = 2 Query: 248 RVYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVN 469 ++++GN+P +ID++ L ++ Q+ G VE AEVIY++ T RSR F FV M TVE+A+ +E + ++ GR + VN Sbjct: 98 KLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVN 171
BLAST of CX286791 vs. ExPASy Swiss-Prot
Match: ROC1_NICPL (30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.248e-12 Identity = 33/79 (41.77%), Postives = 49/79 (62.03%), Query Frame = 2 Query: 242 ARRVYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITE 478 + RVY+GN+ +D D L + E G V A+V+YD+ +GRSR F FV + E+ N IE L+G ++ GR I+V+ E Sbjct: 193 SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAE 271 HSP 2 Score: 68.9366 bits (167), Expect = 1.457e-11 Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 2 Query: 248 RVYIGNIPRNIDNDELTKIVQEHGAVEKAEVIYDKYTGRSRRFAFVMMKTVEDANAVIEKLNGTEIGGREIKVNITEKP 484 ++++GN+ + D+ L ++ + G VE EVIYDK TGRSR F FV M + E+ A ++ NG E+ GR ++VN P Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPP 166 The following BLAST results are available for this feature:
BLAST of CX286791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286791 ID=CX286791; Name=CX286791; organism=Citrus clementina; type=EST; length=504bpback to top |