CX286794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOC_CHICK (Rho-related GTP-binding protein RhoC OS=Gallus gallus GN=RHOC PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.394e-40 Identity = 81/156 (51.92%), Postives = 106/156 (67.95%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR+D+ + + P+ G ++ I A Y+ECS+K Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRINAFGYLECSAK 162
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOC_BOVIN (Rho-related GTP-binding protein RhoC OS=Bos taurus GN=RHOC PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.394e-40 Identity = 81/156 (51.92%), Postives = 106/156 (67.95%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPIILVG K DLR D+ + + P+ + G ++ I A Y+ECS+K Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAK 162
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOB_RAT (Rho-related GTP-binding protein RhoB OS=Rattus norvegicus GN=Rhob PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 9.099e-40 Identity = 81/156 (51.92%), Postives = 104/156 (66.67%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW+PE+KH+ P VPIILV K DLR D+ + P+ T G + I A Y+ECS+K Sbjct: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAK 162
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOB_MOUSE (Rho-related GTP-binding protein RhoB OS=Mus musculus GN=Rhob PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 9.099e-40 Identity = 81/156 (51.92%), Postives = 104/156 (66.67%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW+PE+KH+ P VPIILV K DLR D+ + P+ T G + I A Y+ECS+K Sbjct: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAK 162
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOB_HUMAN (Rho-related GTP-binding protein RhoB OS=Homo sapiens GN=RHOB PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 9.099e-40 Identity = 81/156 (51.92%), Postives = 104/156 (66.67%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW+PE+KH+ P VPIILV K DLR D+ + P+ T G + I A Y+ECS+K Sbjct: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAK 162
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOB_BOVIN (Rho-related GTP-binding protein RhoB OS=Bos taurus GN=RHOB PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 9.099e-40 Identity = 81/156 (51.92%), Postives = 104/156 (66.67%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW+PE+KH+ P VPIILV K DLR D+ + P+ T G + I A Y+ECS+K Sbjct: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAK 162
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO_APLCA (Ras-like GTP-binding protein RHO OS=Aplysia californica GN=RHO PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.188e-39 Identity = 80/156 (51.28%), Postives = 107/156 (68.59%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK--QFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE++H+ P VPIILVG K DLR+D+ + + P+ G + + I A +Y+ECS+K Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKKDLRNDESTKRELMKMKQEPVRPEDGRAMAEKINAYSYLECSAK 162
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO4_YEAST (GTP-binding protein RHO4 OS=Saccharomyces cerevisiae GN=RHO4 PE=1 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 2.027e-39 Identity = 79/156 (50.64%), Postives = 105/156 (67.31%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 +K V VGDGAVGKTCLLISY TFPTDY+PT+F+N+ N+ NG + L LWDTAGQE+Y+RLRPLSY ADV ++ +S+ SK S +NV W PE+KH+ P PI+LVG K DL + + + + E L K +GA A+I+CS++ Sbjct: 73 LKIVVVGDGAVGKTCLLISYVQGTFPTDYIPTIFENYVTNIEGPNGQIIELALWDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDLWFPEVKHFCPSTPIMLVGLKSDLYEADNL------SDLVEPSSAESLAKRLGAFAHIQCSAR 222
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO1_SCHPO (GTP-binding protein rho1 OS=Schizosaccharomyces pombe GN=rho1 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.716e-38 Identity = 78/156 (50.00%), Postives = 106/156 (67.95%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ TFP YVPTVF+N+ A+V V+G V L LWDTAGQEDY+RLRPLSY + V ++ F++ S S +NV +KWI E+ H+ +PI+LV K DLR+D + + P++T G+ + + IGA Y+ECS+K Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAK 163
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO5_SCHPO (GTP-binding protein rho5 OS=Schizosaccharomyces pombe GN=rho5 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.241e-38 Identity = 78/156 (50.00%), Postives = 107/156 (68.59%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ TFP YVPTVF+N+ A+V V+G + L LWDTAGQEDY+RLRPLSY + V ++ FS+ + S +NV +KWI E+ H+ +PI+LVG K+DLR+D + + PI+ G+ + + IGA Y+ECS+K Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAK 163 The following BLAST results are available for this feature:
BLAST of CX286794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286794 ID=CX286794; Name=CX286794; organism=Citrus clementina; type=EST; length=551bpback to top |