CX286794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOV_RAT (Rho-related GTP-binding protein RhoV OS=Rattus norvegicus GN=Rhov PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.927e-38 Identity = 77/159 (48.43%), Postives = 107/159 (67.30%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID-----HPGAVPISTAHGEELRKLIGAPAYIECSS 546 IKCV VGDGAVGK+ L++SYT N +P+ Y PT D FS V+V+G+ V + LWDTAGQED++RLR L Y DVF+ FS++ +S++N+++KW+PE++ + P P++LVGT+ DLRDD I G VP A G L + I A Y+ECS+ Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCNGYPSRYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGGREGPVPEPQAQG--LAEKIRACCYLECSA 188
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOV_MOUSE (Rho-related GTP-binding protein RhoV OS=Mus musculus GN=Rhov PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.823e-38 Identity = 77/159 (48.43%), Postives = 106/159 (66.67%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID-----HPGAVPISTAHGEELRKLIGAPAYIECSS 546 IKCV VGDGAVGK+ L++SYT N +P Y PT D FS V+V+G+ V + LWDTAGQED++RLR L Y DVF+ FS++ +S++N+++KW+PE++ + P P++LVGT+ DLRDD I G VP A G L + I A Y+ECS+ Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGGREGPVPQPQAQG--LAEKIRACCYLECSA 188
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOV_HUMAN (Rho-related GTP-binding protein RhoV OS=Homo sapiens GN=RHOV PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.823e-38 Identity = 77/159 (48.43%), Postives = 106/159 (66.67%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID-----HPGAVPISTAHGEELRKLIGAPAYIECSS 546 IKCV VGDGAVGK+ L++SYT N +P Y PT D FS V+V+G+ V + LWDTAGQED++RLR L Y DVF+ FS++ +S++N+++KW+PE++ + P P++LVGT+ DLRDD I G VP A G L + I A Y+ECS+ Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDFDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGGREGPVPQPQAQG--LAEKIRACCYLECSA 188
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOV_BOVIN (Rho-related GTP-binding protein RhoV OS=Bos taurus GN=Rhov PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.112e-37 Identity = 77/159 (48.43%), Postives = 105/159 (66.04%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID-----HPGAVPISTAHGEELRKLIGAPAYIECSS 546 IKCV VGDGAVGK+ L++SYT N +P Y PT D FS V+V+G+ V + LWDTAGQED +RLR L Y DVF+ FS++ +S++N+++KW+PE++ + P P++LVGT+ DLRDD I G VP A G L + I A Y+ECS+ Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQEDLDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDVNVLIQLDQGGREGPVPQPQAQG--LAEKIRACCYLECSA 188
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO_DISOM (Ras-like GTP-binding protein O-RHO OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.236e-37 Identity = 77/155 (49.68%), Postives = 102/155 (65.81%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDD-KQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWDTAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P +PIILVG K D+ + + P+ +E+ I A Y+ECS+K Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNIPIILVGNKKTAGDEHTRRELAKMKQEPVKPDDAKEMGSRIKAFGYLECSAK 161
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RACL_DICDI (Rho-related protein racL OS=Dictyostelium discoideum GN=racL PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 9.416e-37 Identity = 81/158 (51.27%), Postives = 103/158 (65.19%), Query Frame = 1 Query: 79 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPG-VPIILVGTKLDLRDDK--QFFIDHPGAVPISTAHGEELRKLIGAPAYIECS 543 ++IK V GDGAVGKT LLI++ S FP DY PTVFDNFS + NLGL+DTAGQED++RLRPL Y D+F++ +S+I+ SY NV KW E+K Y +P+ILVGT+ DLR DK + + PIS G +RK IGA A+ ECS Sbjct: 2 QYIKMVICGDGAVGKTSLLIAFASGEFPRDYQPTVFDNFSTLYMFQNKAYNLGLFDTAGQEDFDRLRPLGYNDTDLFLICYSVINPPSYANVYDKWYSEIKLYTGSEIPLILVGTQNDLRHDKATRETLALKQQAPISYEEGMMMRKRIGAKAFTECS 159
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO4_SCHPO (GTP-binding protein rho4 OS=Schizosaccharomyces pombe GN=rho4 PE=1 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.230e-36 Identity = 75/158 (47.47%), Postives = 103/158 (65.19%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV--NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQF--FIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDG GKTCLLI ++S TFP YVPTVF+N+ ++ N + L LWDTAGQE+Y+RLRPLSY ++V +L FS+ AS NV++KW PE++H+ P PI+LVG K DLR D+ + G P++ + + + AP Y+ECS+K Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKDRNATEVLRTQGLTPVTYQQAQSVALSMNAP-YVECSAK 172
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOD_HUMAN (Rho-related GTP-binding protein RhoD OS=Homo sapiens GN=RHOD PE=1 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 3.578e-36 Identity = 71/159 (44.65%), Postives = 100/159 (62.89%), Query Frame = 1 Query: 79 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 R +K V VGDG GKT LL+ + FP Y PTVF+ + N+ V G V+L +WDTAGQ+DY+RLRPL Y A V +L F + S S++N+ +W PE+ H+ VPII+VG K DL DK + G P++ G+E+ + +GA AY+ECS++ Sbjct: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSAR 174
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: CRL1_CANAL (GTP-binding RHO-like protein OS=Candida albicans GN=CRL1 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.578e-36 Identity = 78/156 (50.00%), Postives = 102/156 (65.38%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 +K V VGDG GKTCLL++YT N FP+ YVPTVF+N+ V NG TV L LWDTAGQE+Y+RLRPLSY D+ ++ F++ ++ S ENV W PE+ HY PG+PIILVGTK DL D ++H ++ ++ K IGA I S+K Sbjct: 76 MKIVVVGDGGCGKTCLLLAYTQNKFPSIYVPTVFENYVTAVQSPNGKTVELALWDTAGQEEYDRLRPLSYPDVDILLVCFAVDNEVSLENVKDMWFPEVNHYCPGIPIILVGTKSDLLSD----MNHDASIRVA--------KEIGAIGLIFTSAK 219
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOD_MOUSE (Rho-related GTP-binding protein RhoD OS=Mus musculus GN=Rhod PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.103e-36 Identity = 69/157 (43.95%), Postives = 103/157 (65.61%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 +K V VGDG GKT L++ + FP Y PTVF+ ++A + + G V+L +WDTAGQ+DY+RLRPL Y A+V +L F + + S++NVS +W PE+ H+ GVPII+VG K+DLR DK + P++ G ++ + +GA AY+ECS++ Sbjct: 18 VKVVLVGDGGCGKTSLMMVFAKGAFPESYSPTVFERYNATLQMKGKPVHLQIWDTAGQDDYDRLRPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEVTHFCKGVPIIVVGCKIDLRKDKVLVNNLRKKRLEPVTYHRGHDMARSVGAVAYLECSAR 174 The following BLAST results are available for this feature:
BLAST of CX286794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286794 ID=CX286794; Name=CX286794; organism=Citrus clementina; type=EST; length=551bpback to top |