CX286794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RACG_DICDI (Rho-related protein racG OS=Dictyostelium discoideum GN=racG PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.041e-35 Identity = 73/156 (46.79%), Postives = 102/156 (65.38%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 IK VG+G +GKT +L+SYTSN+ +Y PTVFDN+S ++ N NL LWDTAGQE++++LR LSY DVF+L FSLI+ +S+ N+ W+ EL P PI+LVGT++DL+ + + +PIST G EL K I A ++ECS+ Sbjct: 4 IKVCVVGEGGIGKTSMLLSYTSNSISNEYQPTVFDNYSTLLMHNKKPYNLSLWDTAGQEEFSKLRRLSYPQTDVFLLCFSLINPSSFSNILDSWVQELNENCPNTPIVLVGTQMDLKSNSVILDRLCEKKQLPISTQQGIELSKKINAFDFVECSA 159
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO5_YEAST (GTP-binding protein RHO5 OS=Saccharomyces cerevisiae GN=RHO5 PE=1 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.360e-35 Identity = 85/199 (42.71%), Postives = 110/199 (55.28%), Query Frame = 1 Query: 79 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVN------------------------------LGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-----------PGVPIILVGTKLDLRDD--KQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 R IKCV +GDGAVGKT LLISYT+N+FPTDYVPTVFDN+S + + T + + LWDTAGQEDY+RLRPL Y D+F++ FS+ AS+ NV++KW+PELK + PI+LVGTK DLRDD Q + + +S +EL + G Y ECS+ Sbjct: 2 RSIKCVIIGDGAVGKTSLLISYTTNSFPTDYVPTVFDNYSTTIAIPNGTASSPLELDNGNDKRGSLSSASSSPSTDRKLYKINLWDTAGQEDYDRLRPLCYPQTDIFLICFSVSEHASFANVTEKWLPELKQTSNIEGTSLYTKLGKYPILLVGTKSDLRDDPATQKKLQEANSDYVSQEEIDELVQRCGFMGYTECSA 200
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOC_EMENI (GTP-binding protein rhoC OS=Emericella nidulans GN=rhoC PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.319e-35 Identity = 77/158 (48.73%), Postives = 100/158 (63.29%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV--NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQF--FIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDG GKTCLLISY+ FP YVPTVF+N+ + +G TV L LWDTAGQE+Y+RLRPLSY D+ + F++ AS ENV KW PE+ H+ P PIILVG K DLR+ + + G P++ G+ + + A +Y+ECSSK Sbjct: 71 KFVVVGDGGCGKTCLLISYSQGYFPEKYVPTVFENYITQTLHRRSGKTVELALWDTAGQEEYDRLRPLSYPETDLLFVCFAIDCPASLENVMDKWYPEVLHFCPTTPIILVGLKSDLRNKRTCIELLKTQGLTPVTPEQGQAVAGRMNA-SYVECSSK 227
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOF_BOVIN (Rho-related GTP-binding protein RhoF OS=Bos taurus GN=RHOF PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.503e-34 Identity = 70/162 (43.21%), Postives = 103/162 (63.58%), Query Frame = 1 Query: 70 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGA--VPISTAHGEELRKLIGAPAYIECSSK 549 S + +K V VGDG GKT LL+ Y+ +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + ++ + +++ SY+NV KW PE+ H+ G+P++L+G K DLR DK+ A PI+ G+ + I A Y+ECS+K Sbjct: 19 SGRKELKIVIVGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGQSACEQIRAALYLECSAK 180
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: CDC42_COLGL (Cell division control protein 42 homolog OS=Colletotrichum gloeosporioides GN=CDC42 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.564e-34 Identity = 75/154 (48.70%), Postives = 101/154 (65.58%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 IKCV VGDGAVGKTCLLISYT+N FP++YVPTVFDN++ V++ LGL+DTAGQEDY+RLRPLSY DVF++ FS+ S AS+ENV++ PGV +++V + + + P+ GE + K +GA Y+ECS+ Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVARSGSRGTSP-LPGV-LLIVAPVTERGSSVREKLSKQKMSPVRKEDGERMAKDLGAVKYVECSA 157
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO2_SCHPO (GTP-binding protein rho2 OS=Schizosaccharomyces pombe GN=rho2 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 9.744e-34 Identity = 77/162 (47.53%), Postives = 99/162 (61.11%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVP---------ISTAHGEELRKLIGAPAYIECSS 546 K V VGDGA GKT LL +T FPT+YVPTVF+N+ ++ V+G +V L LWDTAGQE+Y RLRP+SY A + ++ F++ S S ENVS KWI E+ P VP ILVG K DLR D P A+ + + E + + IGA Y+ECSS Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSD-------PVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSS 164
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOF_HUMAN (Rho-related GTP-binding protein RhoF OS=Homo sapiens GN=RHOF PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.273e-33 Identity = 69/157 (43.95%), Postives = 100/157 (63.69%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGA--VPISTAHGEELRKLIGAPAYIECSSK 549 +K V VGDG GKT LL+ Y+ +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + ++ + +++ SY+NV KW PE+ H+ G+P++L+G K DLR DK+ A PI+ G + I A Y+ECS+K Sbjct: 20 LKIVIVGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYMQGLSACEQIRAALYLECSAK 176
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RACM_DICDI (Rho-related protein racM OS=Dictyostelium discoideum GN=racM PE=3 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 2.171e-33 Identity = 74/161 (45.96%), Postives = 99/161 (61.49%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYT-SNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRD-----DKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 IK VT+GD VGKT LL++YT S +FP +YVPT DNF +NG +L +WDTAG E Y+ LRPL Y D+ +L F++ ++ S+ ++ WI E+ Y PG+PIILVGTK+DLRD DK F+ + G L K IGA + ECSS+ Sbjct: 6 IKIVTIGDYGVGKTTLLMTYTASGSFPQEYVPTALDNFIHEATINGKKASLSIWDTAGGEYYHELRPLIYPETDILLLLFAIENRESFLHIKTNWITEINQYIPGIPIILVGTKIDLRDSDLIKDKSNFVKY--------KEGLALSKEIGASHFCECSSR 158
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOF_MOUSE (Rho-related GTP-binding protein RhoF OS=Mus musculus GN=Rhof PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.703e-33 Identity = 69/162 (42.59%), Postives = 100/162 (61.73%), Query Frame = 1 Query: 70 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGA--VPISTAHGEELRKLIGAPAYIECSSK 549 SA + +K V VGDG GKT LL+ Y +FP Y P+VF+ ++A+V V V L L+DTAGQEDY+RLRPLSY+ + ++ + +++ SY+NV KW PE+ H+ G+P +L+G K DLR DK+ A PI+ G + + Y+ECS+K Sbjct: 15 SARKELKIVIVGDGGCGKTSLLMVYCQGSFPEHYAPSVFEKYTASVTVGNKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPTVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGLNACEQMRGALYLECSAK 176
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO1_ENTHI (Ras-like GTP-binding protein RHO1 OS=Entamoeba histolytica GN=RHO1 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 6.983e-32 Identity = 71/159 (44.65%), Postives = 102/159 (64.15%), Query Frame = 1 Query: 70 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 + + +K V VGDGAVGKTCLL++++ PT YVPTVF+NFS + L LWDTAGQE+Y+RLRPLSY +DV +L F++ ++ S++N+S KW PE+KH + +IL K+DLR D + ++ G++L + +G AYIE SS Sbjct: 16 NGKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILDLWDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKH----LYLILQRLKVDLRKDV--------SDDVTKQEGDDLCQKLGCVAYIEASS 162 The following BLAST results are available for this feature:
BLAST of CX286794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286794 ID=CX286794; Name=CX286794; organism=Citrus clementina; type=EST; length=551bpback to top |