CX286794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO4_ASHGO (GTP-binding protein RHO4 OS=Ashbya gossypii GN=RHO4 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.654e-31 Identity = 66/156 (42.31%), Postives = 98/156 (62.82%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 IK V VGDGA GKT LL+SYT FP DYVPT+F+N+ N+ G + L LWDTAGQE+Y+RLRPLSY D+ ++ ++ ++ S N + W PE++H+ P P++LVG K DL + +D + + E + + +GA +++CS+K Sbjct: 53 IKIVVVGDGATGKTSLLMSYTQGQFPEDYVPTIFENYVTNIEGPRGKVIELALWDTAGQEEYSRLRPLSYGDVDIVMVCYAADNRTSLTNAEELWFPEVRHFCPHAPMMLVGLKSDL-----YSLDALDRL-VDPTDAELVARKMGAFVHLQCSAK 202
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO3_SCHPO (GTP-binding protein rho3 OS=Schizosaccharomyces pombe GN=rho3 PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 4.526e-31 Identity = 68/154 (44.16%), Postives = 96/154 (62.34%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V +GDGA GKT LL +T FP Y PT+F+N+ ++ V+G+++ L LWDTAGQE+Y++LR LSY V ++ F++ S+ S ENV KW+PE+ PGV ++LV K DLR + +DH + I G K I A Y+ECS+K Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADEEQVDH--SKIIDYEEGLAAAKKINAVRYLECSAK 166
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RACI_DICDI (Rho-related protein racI OS=Dictyostelium discoideum GN=racI PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.008e-30 Identity = 67/160 (41.88%), Postives = 100/160 (62.50%), Query Frame = 1 Query: 82 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGV--PIILVGTKLDLRDDK---QFFIDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 +IK + +GD GKT ++++Y++ +FPT YVP+ D S ++ N ++G WD++ +++ RP +Y +V IL FS+ S S+ENVSKKWIPE++ YAP + PIIL+GTK DLR+D+ ++ PIS G L K I A Y+ECSS Sbjct: 5 YIKLLVLGDSKTGKTTMMMTYSTGSFPTGYVPSHVDATSLDIEYNKQVCHVGFWDSSALAEFDNTRPSTYPNTNVIILCFSIDSPTSFENVSKKWIPEIRQYAPSIHTPIILLGTKCDLREDENTINLLKENNQMPPISYKQGLALSKEIKATMYLECSS 164
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOH_MOUSE (Rho-related GTP-binding protein RhoH OS=Mus musculus GN=Rhoh PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.317e-30 Identity = 64/154 (41.56%), Postives = 98/154 (63.64%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 IKCV VGD AVGKT LL+ +TS TFP Y PTV++N +V ++G ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E++ P P+++V T+ D R+ + A I+ G+ L + + A Y+ECS+ Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWISEIRSNLPCTPVLVVATQTDQRE-----VGPHRASCINAIEGKRLAQDVRAKGYLECSA 153
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOH_BOVIN (Rho-related GTP-binding protein RhoH OS=Bos taurus GN=RHOH PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.720e-30 Identity = 63/154 (40.91%), Postives = 99/154 (64.29%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 IKCV VGD AVGKT LL+ +TS TFP Y PTV++N +V+++G ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E++ P P+++V T+ D R+ + A ++ G+ L + + A Y+ECS+ Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVLMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEVRSNLPCTPVLVVATQTDQRE-----VGPHRASCVNAIEGKRLAQDVRAKGYLECSA 153
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHOH_HUMAN (Rho-related GTP-binding protein RhoH OS=Homo sapiens GN=RHOH PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.934e-30 Identity = 63/154 (40.91%), Postives = 99/154 (64.29%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 IKCV VGD AVGKT LL+ +TS TFP Y PTV++N +V ++G ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E++ P P+++V T+ D R+ + A ++ G++L + + A Y+ECS+ Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQRE-----MGPHRASCVNAMEGKKLAQDVRAKGYLECSA 153
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO2_YEAST (GTP-binding protein RHO2 OS=Saccharomyces cerevisiae GN=RHO2 PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 2.934e-30 Identity = 70/154 (45.45%), Postives = 93/154 (60.39%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPG-AVPISTAHGEELRKLIGAPAYIECSS 546 K V +GDGA GKT LL +T FP Y PTVF+N+ + V+G V+L LWDTAGQE+Y RLRP SY AD+ ++ F++ + S N KW E Y P PI+LVG K DLR + F + VPI A +++ + IGA Y+ECS+ Sbjct: 9 KLVIIGDGACGKTSLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDTAGQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLKKDLRQEAHFKENATDEMVPIEDA--KQVARAIGAKKYMECSA 160
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHO3_SCHCO (GTP-binding protein Rho3 OS=Schizophyllum commune GN=RHO3 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.233e-28 Identity = 67/156 (42.95%), Postives = 90/156 (57.69%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V GDGA GKT LL +T F Y PTVF+N+ ++ ++ V L LWDTAGQE+++RLR LSY V ++ FS+ + S ENV KW+ E+ Y PGV ++LV +K DLRDD + G G + + I A Y+ECSSK Sbjct: 19 KVVVCGDGACGKTSLLNVFTRGFFTQVYEPTVFENYVHDLYIDDQLVELSLWDTAGQEEFDRLRSLSYAETHVIMICFSVDNPTSLENVESKWLDEILEYCPGVKLVLVDSKCDLRDDPAVLDRLQRYGTHTDQYEEGLGVARRIRASRYLECSSK 174
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RND3_RAT (Rho-related GTP-binding protein RhoE OS=Rattus norvegicus GN=Rnd3 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.610e-28 Identity = 66/171 (38.60%), Postives = 100/171 (58.48%), Query Frame = 1 Query: 46 LS*KKIKMSASRFIKC--VTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAHGEELRKLIGAPAYIECSS 546 LS K I M ++ +KC V VGD GKT LL + + FP +YVPTVF+N++A+ ++ + L LWDT+G Y+ +RPLSY +D ++ F + + ++V KKW E++ + P ++LVG K DLR D ++ + P+S G + K IGA YIECS+ Sbjct: 10 LSSKSI-MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSA 179
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RND3_PONAB (Rho-related GTP-binding protein RhoE OS=Pongo abelii GN=RND3 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.610e-28 Identity = 66/171 (38.60%), Postives = 100/171 (58.48%), Query Frame = 1 Query: 46 LS*KKIKMSASRFIKC--VTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAHGEELRKLIGAPAYIECSS 546 LS K I M ++ +KC V VGD GKT LL + + FP +YVPTVF+N++A+ ++ + L LWDT+G Y+ +RPLSY +D ++ F + + ++V KKW E++ + P ++LVG K DLR D ++ + P+S G + K IGA YIECS+ Sbjct: 10 LSSKSI-MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSA 179 The following BLAST results are available for this feature:
BLAST of CX286794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286794 ID=CX286794; Name=CX286794; organism=Citrus clementina; type=EST; length=551bpback to top |