CX286794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RND1_BOVIN (Rho-related GTP-binding protein Rho6 OS=Bos taurus GN=RND1 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 9.141e-24 Identity = 57/155 (36.77%), Postives = 83/155 (53.55%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAHGEELRKLIGAPAYIECSS 546 K V VGD GKT +L + +P YVPTVF+N++A + V L LWDT+G Y+ +RPL Y +D +L F + + ++ KKW E+ Y P ++L+G K DLR D ++ H PIS G + K +GA Y+E S+ Sbjct: 15 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSA 169
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.330e-19 Identity = 59/157 (37.58%), Postives = 87/157 (55.41%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 IK + VGD VGK+CLL+ +T + F + ++ T+ +F V V+G V L +WDTAGQE + + YRGA IL + + +AS+ NV + W+ + +H + V ILVG KLDL +DK+ +S A G+ L G Y E S+K Sbjct: 14 IKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNV-RNWMRNIEQHASDNVNKILVGNKLDLAEDKRV---------VSIARGQALADEFGFRFY-ETSAK 159
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHBT1_HUMAN (Rho-related BTB domain-containing protein 1 OS=Homo sapiens GN=RHOBTB1 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 5.191e-19 Identity = 66/174 (37.93%), Postives = 91/174 (52.30%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDY------VPTVF--DNFS--------ANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID---HPGAVPISTA------HGEELRKLIGAPAY 531 IKCV VGD AVGKT L+ + NT T Y VPTV+ D + + VV+ +V+L LWDT G D+++ R +Y +DV +L FS+ + S +V W PE+KH+ P P+ILVG +LDLR ++ P A PI G E+ K +G P Y Sbjct: 15 IKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDEVSVSLRLWDTFG--DHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKSMWYPEIKHFCPRTPVILVGCQLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKELGLPYY 186
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RASC_DICDI (Ras-like protein rasC OS=Dictyostelium discoideum GN=rasC PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.510e-18 Identity = 56/160 (35.00%), Postives = 90/160 (56.25%), Query Frame = 1 Query: 76 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 S+ +K V VGDG VGK+ L I T N F +Y PT+ +++ V ++ L + DTAGQE+Y+ +R R F++ +S+IS+AS+E V+ ++ I +K + PI+++G K DL D + + G+EL K GAP ++E S+K Sbjct: 2 SKLLKLVIVGDGGVGKSALTIQLTQNQFIAEYDPTIENSYRKQVNIDEEVYMLDILDTAGQEEYSAMRDQYIRSGRGFLIVYSIISRASFEAVTTFREQILRVKDLST-YPIVIIGNKADLPDKDR---------KVPPMEGKELAKSFGAP-FLETSAK 150
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHBT2_MOUSE (Rho-related BTB domain-containing protein 2 OS=Mus musculus GN=Rhobtb2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.576e-18 Identity = 65/174 (37.36%), Postives = 90/174 (51.72%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDY------VPTVF--DNFS--------ANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID---HPGAVPIS------TAHGEELRKLIGAPAY 531 IKCV VGD AVGKT L+ + N T Y VPTV+ D + + VV+ +V+L LWDT G D+++ R +Y +DV +L FS+ + S +V W PE+KH+ P P+ILVG +LDLR ++ P A PI G E+ K +G P Y Sbjct: 15 IKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDDVSVSLRLWDTFG--DHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKELGIPYY 186
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHBT2_HUMAN (Rho-related BTB domain-containing protein 2 OS=Homo sapiens GN=RHOBTB2 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 2.576e-18 Identity = 65/174 (37.36%), Postives = 90/174 (51.72%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDY------VPTVF--DNFS--------ANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID---HPGAVPIS------TAHGEELRKLIGAPAY 531 IKCV VGD AVGKT L+ + N T Y VPTV+ D + + VV+ +V+L LWDT G D+++ R +Y +DV +L FS+ + S +V W PE+KH+ P P+ILVG +LDLR ++ P A PI G E+ K +G P Y Sbjct: 15 IKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDDVSVSLRLWDTFG--DHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKELGIPYY 186
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RABG2_DICDI (Ras-related protein RabG2 OS=Dictyostelium discoideum GN=rabG2 PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 4.394e-18 Identity = 51/128 (39.84%), Postives = 74/128 (57.81%), Query Frame = 1 Query: 67 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFP-TDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP-GVPIILVGTKLDLRDDK 444 MS K + +GD AVGKT LL+ + N+F T T D + N+V++G T NL +WDTAGQE + + YRGA ++ + + + +Y NV + W+ E++ YA GV +LVG K DL D K Sbjct: 1 MSDPDVFKILLIGDSAVGKTSLLLRFADNSFQETSVNMTSVDYKNKNIVIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNV-RLWMQEIQRYAVLGVSRVLVGNKCDLEDRK 127
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAS3_RHIRA (Ras-like protein 3 OS=Rhizomucor racemosus GN=RAS3 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.495e-18 Identity = 57/164 (34.76%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 64 KMSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSK--KWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K S R K V VG G VGK+ L I + + F +Y PT+ D++ V++ T L + DTAGQE+Y+ +R R + F+L +S+ S+ S+E V+ + I +K P++LVG K DL D+Q +S+ G +L K G P + E S+K Sbjct: 3 KASFLREYKIVIVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCVIDDETALLDVLDTAGQEEYSAMREQYMRNGEGFVLVYSITSRLSFEEVNTFYQQIRRVKD-RDSFPMVLVGNKCDLEGDRQ----------VSSQEGRDLAKSFGCP-FSETSAK 154
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RHBT1_MOUSE (Rho-related BTB domain-containing protein 1 OS=Mus musculus GN=Rhobtb1 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.789e-18 Identity = 63/174 (36.21%), Postives = 90/174 (51.72%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDY------VPTVF--DNFS--------ANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID---HPGAVPISTA------HGEELRKLIGAPAY 531 IKCV VGD AVGKT L+ + NT T Y VPTV+ D + + VV+ +++L LWDT G D+++ R +Y +DV +L FS+ + S +V W E+KH+ P P++LVG +LDLR ++ P A PI G E+ K +G P Y Sbjct: 15 IKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDEVSISLRLWDTFG--DHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKTMWYQEIKHFCPRTPVVLVGCQLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKELGIPYY 186
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB15_RAT (Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.670e-17 Identity = 50/150 (33.33%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP-GVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAY 531 + + +GD VGKTCLL +T N F + ++ T+ +F + V+G V + +WDTAGQE Y + YR A L + + S+ SY+++ KW+ ++ YAP GV IL+G K D +Q + G++L K G Y Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHI-MKWVSDVDEYAPEGVQKILIGNKADEEQKRQ----------VGREQGQQLAKEYGMDFY 148 The following BLAST results are available for this feature:
BLAST of CX286794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286794 ID=CX286794; Name=CX286794; organism=Citrus clementina; type=EST; length=551bpback to top |