CX286794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 3.720e-17 Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K + +GD VGK+CLL+ + +T+ Y+ T+ +F + ++G T+ L +WDTAGQE + + YRGA I+ + + + S+ NV K+W+ E+ YA V +LVG K DL K V +TA +E +G P ++E S+K Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKCDLTTKK--------VVDYTTA--KEFADSLGIP-FLETSAK 156
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 3.720e-17 Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K + +GD VGK+CLL+ + +T+ Y+ T+ +F + ++G T+ L +WDTAGQE + + YRGA I+ + + + S+ NV K+W+ E+ YA V +LVG K DL K V +TA +E +G P ++E S+K Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKCDLTTKK--------VVDYTTA--KEFADSLGIP-FLETSAK 156
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB15_BOVIN (Ras-related protein Rab-15 OS=Bos taurus GN=RAB15 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.720e-17 Identity = 45/122 (36.89%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP-GVPIILVGTKLDLRDDKQ 447 + + +GD VGKTCLL +T N F + ++ T+ +F + V+G V + +WDTAGQE Y + YR A L + + S+ SY+++ KW+ ++ YAP GV IL+G K D +Q Sbjct: 10 RLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHI-MKWVSDVDEYAPEGVQKILIGNKADEEQKRQ 130
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RACO_DICDI (Rho-related protein racO OS=Dictyostelium discoideum GN=racO PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.858e-17 Identity = 57/165 (34.55%), Postives = 88/165 (53.33%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSAN---VVVNGSTVNLGLWDTAGQED---YNRLRP-LSYRG--ADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDH--PGAVPISTAHGEELRKLIGAPAYIECSS 546 +K VTVGDG +GKT LL++Y +N F T V + FD+ N V++N + + LW+ G + Y P + Y+ +VF+L FS+ + S+ N KW E+K P +P++L G K DLR+++ + + IS + G + I A Y ECSS Sbjct: 5 VKIVTVGDGLIGKTTLLMTYYTNEFNTR-VYSSFDSEYLNPLTVIINDDVIEISLWENDGFDSDGVYKESPPFIKYQPNHINVFLLLFSISDRDSFNNCLTKWNFEIKQNYPSIPVVLCGIKTDLREEENLVYKNSIDNSHFISFSEGVNMANEIDAVGYYECSS 168
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.858e-17 Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K + +GD VGK+CLL+ + +T+ Y+ T+ +F + ++G T+ L +WDTAGQE + + YRGA I+ + + + S+ NV K+W+ E+ YA V +LVG K DL K V +TA +E +G P ++E S+K Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKSDLTTKK--------VVDFTTA--KEYADQLGIP-FLETSAK 156
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 6.345e-17 Identity = 50/156 (32.05%), Postives = 84/156 (53.85%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K + +GD +VGK+C L+ + +++ Y+ T+ +F V V G TV L +WDTAGQE + + YRGA I+ + + S+ NV K+W+ E+ YA V +LVG K DL +++ + T+ + + +G P ++E S+K Sbjct: 10 KLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNV-KQWLDEIDRYANDSVRKLLVGNKCDLAENR----------AVDTSVAQAYAQEVGIP-FLETSAK 153
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAS2_RHIRA (Ras-like protein 2 OS=Rhizomucor racemosus GN=RAS2 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 6.345e-17 Identity = 51/159 (32.08%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSK-----KWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VGDG VGK+ + I + +TF +Y PT+ D++ +++ L + DTAGQE+Y+ +R R + F+L +S+ S ++E V K + +L+H+ P++LVG K DL D+Q + T+ G +L K + E S+K Sbjct: 13 KIVMVGDGGVGKSAMTIQFIQSTFVDEYDPTIEDSYRKQCLIDSECAMLDILDTAGQEEYSAMRERFMRNGEGFVLIYSITSYHTFEQVQKLHEQIARVKDLEHF----PMVLVGNKCDLEQDRQ----------VPTSAGRDLAKQYNC-QFFEASAK 156
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 6.345e-17 Identity = 50/156 (32.05%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K + +GD VGK+CLL+ + +T+ Y+ T+ +F + ++G + L +WDTAGQE + + YRGA I+ + + S+ NV K+W+ E++ YA V +LVG K DL + K + T+ E +G P ++E S+K Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNV-KQWMQEIQRYACDSVTRLLVGNKCDLIEKK----------IVDTSTAREYADSVGIP-FLETSAK 153
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 8.287e-17 Identity = 52/156 (33.33%), Postives = 85/156 (54.49%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K + +GD VGK+CLL+ + +++ Y+ T+ +F V +G T+ L +WDTAGQE + + YRGA I+ + + + S+ NV K+W+ E+ YA V +LVG K DL +++ +S G+ L IG P ++E S+K Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLNEIDRYASENVNKLLVGNKCDLAENR----------VVSYEAGKALADEIGIP-FLETSAK 153
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.287e-17 Identity = 52/157 (33.12%), Postives = 87/157 (55.41%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + ++G + L +WDTAGQE + + YRGA +L + + ++S+ N+ + WI + +H + V ILVG K D+ + K+ AVP TA G+ L G + E S+K Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMDESKR-------AVP--TAKGQALADEYGI-KFFETSAK 161 The following BLAST results are available for this feature:
BLAST of CX286794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286794 ID=CX286794; Name=CX286794; organism=Citrus clementina; type=EST; length=551bpback to top |