CX286794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 6.566e-14 Identity = 43/121 (35.54%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 76 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSA-NVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDL 432 S K V +GD VGK+ +L +T N F D T+ F+ ++ + G T+ +WDTAGQE Y + YRGA +L + + + S++NV +W+ EL+ +A + I++VG K DL Sbjct: 10 SYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNV-HRWLRELRDHADSSIVIMMVGNKSDL 129
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RBH1B_ARATH (Ras-related protein RABH1B OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.566e-14 Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 67 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDDKQFFIDHPGA 471 +SA K V +GD +VGKT ++ + + F Y T+ D S + + TV L LWDTAGQE + L P R + V ++ + + S+ S+ N + KWI E++ V ++LVG K DL D +Q I+ A Sbjct: 4 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTT-KWIDEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEAEA 139
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB27A_RAT (Ras-related protein Rab-27A OS=Rattus norvegicus GN=Rab27a PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.566e-14 Identity = 55/167 (32.93%), Postives = 78/167 (46.71%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-----------NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK--HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 IK + +GD VGKT +L YT F + ++ TV +F VV G ++L LWDTAGQE + L +R A F+L F L ++ S+ NV + WI +L+ Y I+L G K DL D + + EL + G P Y E S+ Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGTVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNV-RNWISQLQMHAYCENPDIVLCGNKSDLEDQR----------AVKEEEARELAEKYGIP-YFETSA 164
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB27A_MOUSE (Ras-related protein Rab-27A OS=Mus musculus GN=Rab27a PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.566e-14 Identity = 55/167 (32.93%), Postives = 78/167 (46.71%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-----------NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK--HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSS 546 IK + +GD VGKT +L YT F + ++ TV +F VV G ++L LWDTAGQE + L +R A F+L F L ++ S+ NV + WI +L+ Y I+L G K DL D + + EL + G P Y E S+ Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNV-RNWISQLQMHAYCENPDIVLCGNKSDLEDQR----------AVKEEEARELAEKYGIP-YFETSA 164
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAS_LACBI (Ras-like protein OS=Laccaria bicolor PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.566e-14 Identity = 53/164 (32.32%), Postives = 85/164 (51.83%), Query Frame = 1 Query: 73 ASRFI---KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 AS+F+ K V VG G GK+CL I + F +Y PT+ +++ V++ L + DTAGQE+Y+ +R R + F+L +S+ S+ S+E + ++ I +K PII+VG K DL ++ +S GE L + G +IE S+K Sbjct: 2 ASKFLREYKLVVVGGGGEGKSCLTIQLIQSHFVDEYDPTIEESYRKQCVIDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKD-KDYFPIIVVGNKCDLDKER----------VVSKQEGESLARQFGC-KFIETSAK 153
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.566e-14 Identity = 46/151 (30.46%), Postives = 78/151 (51.66%), Query Frame = 1 Query: 64 KMSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRK 510 K + K + +GD VGKTC+L ++ + F T ++ T+ +F V + G + L +WDTAGQE ++ + YRGA +L + + + S+EN+S KW+ + +H V +L+ K D+ DH VP GE++ + Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDQHANEDVERMLLRNKCDM--------DHKRVVP--KGKGEQIAR 142
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB27A_PIG (Ras-related protein Rab-27A OS=Sus scrofa GN=RAB27A PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.576e-14 Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-----------NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK--HYAPGVPIILVGTKLDLRDDK 444 IK + +GD VGKT +L YT F + ++ TV +F VV G ++L LWDTAGQE + L +R A F+L F L ++ S+ NV + WI +L+ Y I+L G K DL D + Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNV-RNWISQLQMHAYCENPDIVLCGNKSDLEDQR 141
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB27A_HUMAN (Ras-related protein Rab-27A OS=Homo sapiens GN=RAB27A PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 8.576e-14 Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-----------NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK--HYAPGVPIILVGTKLDLRDDK 444 IK + +GD VGKT +L YT F + ++ TV +F VV G ++L LWDTAGQE + L +R A F+L F L ++ S+ NV + WI +L+ Y I+L G K DL D + Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNV-RNWISQLQMHAYCENPDIVLCGNKSDLEDQR 141
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB27A_CANFA (Ras-related protein Rab-27A OS=Canis familiaris GN=RAB27A PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.576e-14 Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-----------NGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK--HYAPGVPIILVGTKLDLRDDK 444 IK + +GD VGKT +L YT F + ++ TV +F VV G ++L LWDTAGQE + L +R A F+L F L ++ S+ NV + WI +L+ Y I+L G K DL D + Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNV-RNWISQLQMHAYCENPDIVLCGNKSDLEDQR 141
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RASN_DANRE (GTPase NRas OS=Danio rerio GN=nras PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.576e-14 Identity = 51/156 (32.69%), Postives = 81/156 (51.92%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 K V VG G VGK+ L I N F +Y PT+ D++ VV++G T L + DTAGQE+Y+ +R R + F+ F++ + S+ +V ++ I +K + VP++LVG DL A + T +EL + G ++E S+K Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADVHLYREQIKRVKD-SDDVPMVLVGNICDL------------ARTVDTKQAQELARSYGI-EFVETSAK 146 The following BLAST results are available for this feature:
BLAST of CX286794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286794 ID=CX286794; Name=CX286794; organism=Citrus clementina; type=EST; length=551bpback to top |