CX286794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAP1B_CYPCA (Ras-related protein Rap-1b OS=Cyprinus carpio GN=rap1b PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.120e-13 Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 1 Query: 79 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 R K V +G G VGK+ L + + F Y PT+ D++ V V+G L + DTAG E + +R L + F L +S+ +++++ ++ ++ I +K VPIILVG K DL D++ + G+ L + + A++E S+K Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPIILVGNKCDLEDER----------VVGKEQGQNLARQWNSCAFLESSAK 149
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB18_DICDI (Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.120e-13 Identity = 51/164 (31.10%), Postives = 86/164 (52.44%), Query Frame = 1 Query: 67 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA--PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 M + K + +GD VGKT ++ ++ +TF D + T+ F V V+G V+L +WDTAGQE + L YRGA IL + + + S++N++ W+ E++++A + +LVG K+D + + ++ G E K A +IECS+K Sbjct: 1 MEEDKQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNLN-YWLNEVENFANRSNLVKLLVGNKIDKENRE-----------VTREEGAEFAKK-KAMLFIECSAK 151
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: VPS21_YEAST (Vacuolar protein sorting-associated protein 21 OS=Saccharomyces cerevisiae GN=VPS21 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 49/157 (31.21%), Postives = 81/157 (51.59%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 IK V +G+ AVGK+ +++ + SN F + PT+ F + V +N TV +WDTAGQE + L P+ YR A ++ + + S+ ++ W+ EL A + I LVG K+D+ + G ++ GE+L + G + E S+K Sbjct: 8 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIK-ARHWVKELHEQASKDIIIALVGNKIDM-------LQEGGERKVAREEGEKLAEEKGL-LFFETSAK 155
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RIT2_RAT (GTP-binding protein Rit2 OS=Rattus norvegicus GN=Rit2 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 40/126 (31.75%), Postives = 72/126 (57.14%), Query Frame = 1 Query: 76 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQ 447 SR K V +G G VGK+ + + + S+ FP + PT+ D + V ++ L + DTAGQ ++ +R RG + FI+ +S+ + S++ + K+ I +++H +P++LVG K+DL +Q Sbjct: 18 SREYKVVMLGAGGVGKSAVTMQFISHQFPDYHDPTIEDAYKTQVRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELIFQVRH-TYEIPLVLVGNKIDLEQFRQ 142
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RIT2_MOUSE (GTP-binding protein Rit2 OS=Mus musculus GN=Rit2 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 40/126 (31.75%), Postives = 72/126 (57.14%), Query Frame = 1 Query: 76 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQ 447 SR K V +G G VGK+ + + + S+ FP + PT+ D + V ++ L + DTAGQ ++ +R RG + FI+ +S+ + S++ + K+ I +++H +P++LVG K+DL +Q Sbjct: 18 SREYKVVMLGAGGVGKSAVTMQFISHQFPDYHDPTIEDAYKTQVRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSVTDRQSFQEAAKFKELIFQVRH-TYEIPLVLVGNKIDLEQFRQ 142
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB33A_MOUSE (Ras-related protein Rab-33A OS=Mus musculus GN=Rab33a PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 1 Query: 79 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNR-LRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA--PGVPIILVGTKLDLRDDKQ 447 R K + +GD VGKTCL + TFP T+ +F V + G + + +WDTAGQE + + + YR + + + S+ N+ K WI E +A P VP +LVG K DLR+ Q Sbjct: 35 RIFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNL-KMWIQECNGHAVPPLVPKVLVGNKCDLREQIQ 160
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB33A_HUMAN (Ras-related protein Rab-33A OS=Homo sapiens GN=RAB33A PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 1 Query: 79 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNR-LRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA--PGVPIILVGTKLDLRDDKQ 447 R K + +GD VGKTCL + TFP T+ +F V + G + + +WDTAGQE + + + YR + + + S+ N+ K WI E +A P VP +LVG K DLR+ Q Sbjct: 35 RIFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNL-KMWIQECNGHAVPPLVPKVLVGNKCDLREQIQ 160
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 44/131 (33.59%), Postives = 71/131 (54.20%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAV 474 K V +GD VGK+ +L +T N F + T+ F+ + V G TV +WDTAGQE Y + YRGA +L + + + +++NV ++W+ EL+ +A + I++ G K DL + D GA+ Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV-QRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGAL 143
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 43/118 (36.44%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 435 K V +GD VGK+ +L +T N F + T+ F+ + V G TV +WDTAGQE Y + YRGA +L + + + +++NV ++W+ EL+ H + IIL G K DL+ Sbjct: 14 KMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNV-QRWLRELRDHRDSNIVIILAGNKSDLK 130
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAS_CRYNE (Ras-like protein OS=Cryptococcus neoformans GN=RAS1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 52/166 (31.33%), Postives = 85/166 (51.20%), Query Frame = 1 Query: 67 MSASRFI---KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 MS ++F+ K V VG G VGK+ L I + + F +Y PT+ D++ +++ L + DTAGQE+Y +R R + F+L +S+ S++S+E VS + I +K P+++V K DL ++Q + G +L K A IE S+K Sbjct: 1 MSKAQFLREYKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCIIDEEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRSSFEEVSTFHQQILRVKD-KDYFPVVVVANKCDLEYERQ----------VQPHEGRDLAKRFNAQC-IETSAK 154 The following BLAST results are available for this feature:
BLAST of CX286794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286794 ID=CX286794; Name=CX286794; organism=Citrus clementina; type=EST; length=551bpback to top |