CX286794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RASU_DICDI (Ras-like protein rasU OS=Dictyostelium discoideum GN=rasU PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 41/120 (34.17%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 91 CVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHY-APGVPIILVGTKLDLRDDKQ 447 CV +GDG VGKT + I + SN F Y PT+ D + +++ L + DTAGQ++ N +R + + FIL +S+ S++S++ + + ++ ++K + VPII++ K DL D++Q Sbjct: 18 CV-MGDGGVGKTSITIQFISNHFVNCYDPTIEDLYRKQCLIDDQVYMLDILDTAGQDELNAIRNHWIKSCEGFILVYSVTSRSSFDQI-QSFLDQIKFLKSEKVPIIMIANKSDLDDERQ 135
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RABM_DICDI (Ras-related protein RabM OS=Dictyostelium discoideum GN=rabM PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 39/126 (30.95%), Postives = 71/126 (56.35%), Query Frame = 1 Query: 73 ASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPG-VPIILVGTKLDL-RDDK 444 + + +K +T+GD VGKT + ++ + + + +S + + V L +WDT QE +N L P+ YR ++ + L F + ++ S++N+ K W+ E + + G VP +L+GTK D+ R DK Sbjct: 2 SKKSLKIITLGDSYVGKTSVFNNFVTGKYEINECTVSPSFYSKTLTIENEPVILNVWDTCSQERFNGLSPIYYRWSNCYTLCFDIHNEKSFKNLDK-WMDEARKFCIGKVPFVLIGTKKDIPRTDK 126
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 36/122 (29.51%), Postives = 69/122 (56.56%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIILVGTKLDLRDDK 444 +K + +GD VGK+CLL+ ++ +F ++ T+ +F + + G + L +WDTAGQE + + YRGA +L + + + S+ ++ + WI + +H + V +L+G K D+ + K Sbjct: 16 VKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSI-RNWIRNIEQHASDSVNKMLIGNKCDMTEKK 136
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB4B_RAT (Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQ 447 K + +G GK+CLL + N F D T+ F + VV V G TV L +WDTAGQE + + YRGA +L + + S+ +Y +++ W+ + + A P + +IL G K DL +++ Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKDLDPERE 130
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB4B_MOUSE (Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQ 447 K + +G GK+CLL + N F D T+ F + VV V G TV L +WDTAGQE + + YRGA +L + + S+ +Y +++ W+ + + A P + +IL G K DL +++ Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKDLDPERE 130
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB4B_HUMAN (Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQ 447 K + +G GK+CLL + N F D T+ F + VV V G TV L +WDTAGQE + + YRGA +L + + S+ +Y +++ W+ + + A P + +IL G K DL +++ Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKDLDPERE 130
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB4B_CANFA (Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQ 447 K + +G GK+CLL + N F D T+ F + VV V G TV L +WDTAGQE + + YRGA +L + + S+ +Y +++ W+ + + A P + +IL G K DL +++ Sbjct: 10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKDLDPERE 130
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB31_HUMAN (Ras-related protein Rab-31 OS=Homo sapiens GN=RAB31 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 44/148 (29.73%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 73 ASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGL-WDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP-GVPIILVGTKLDLRD-------DKQFFIDHPGAVPISTA 489 A R +K +GD VGK+ ++ + + F + PT+ +F V G+ ++ L WDTAGQE ++ L P+ YRG+ ++ + + + S+ + KKW+ ELK + P + + + G K DL D D + + + GA+ + T+ Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTL-KKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETS 148
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 76 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDL 432 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADL 128
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 76 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDL 432 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADL 128 The following BLAST results are available for this feature:
BLAST of CX286794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286794 ID=CX286794; Name=CX286794; organism=Citrus clementina; type=EST; length=551bpback to top |