CX286794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB14_PIG (Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 76 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDL 432 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADL 128
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB14_MOUSE (Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 76 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDL 432 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADL 128
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB14_HUMAN (Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 76 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDL 432 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADL 128
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB14_CHICK (Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 76 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDL 432 S K + +GD VGK+CLL +T F D T+ F ++ V+G + L +WDTAGQE + + YRGA ++ + + +++Y ++S W+ + ++ P IIL+G K DL Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADL 128
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB12_MOUSE (Ras-related protein Rab-12 OS=Mus musculus GN=Rab12 PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13 Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAHGEELRKLIGAPAYIECSSK 549 ++ + +G VGKT L+ +T +TF TV +F V + G + L +WDTAGQE +N + YR A IL + + K +++++ KW+ + YA ++LVG KLD D++ IS GE+ + I + E S+K Sbjct: 42 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDL-PKWMKMIDKYASEDAELLLVGNKLDCETDRE----------ISRQQGEKFAQQITGMRFCEASAK 187
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RIT1_MOUSE (GTP-binding protein Rit1 OS=Mus musculus GN=Rit1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.910e-13 Identity = 39/125 (31.20%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 76 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSK-KWIPELKHYAPGVPIILVGTKLDLRDDKQ 447 SR K V +G G VGK+ + + + S+ FP D+ PT+ D + + ++ NL + DTAGQ ++ +R R + FI+ +S+ + S+ V + K + P++LVG K DL+ +Q Sbjct: 19 SREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQ 143
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RIT1_HUMAN (GTP-binding protein Rit1 OS=Homo sapiens GN=RIT1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.910e-13 Identity = 39/125 (31.20%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 76 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSK-KWIPELKHYAPGVPIILVGTKLDLRDDKQ 447 SR K V +G G VGK+ + + + S+ FP D+ PT+ D + + ++ NL + DTAGQ ++ +R R + FI+ +S+ + S+ V + K + P++LVG K DL+ +Q Sbjct: 19 SREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQ 143
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB18B_DANRE (Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.910e-13 Identity = 39/124 (31.45%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 85 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPII--LVGTKLDLRDDKQ 447 +K + +G+ VGK+ LL+ +T +TF + T+ +F + ++G+ L +WDTAGQE + L P YRGA IL + + + ++ + + W+ EL+ Y ++ LVG K+D +D+++ Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKL-ENWLNELETYCTRNDLVKMLVGNKID-KDNRE 130
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.910e-13 Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 1 Query: 88 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSAN-VVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDL 432 K V +GD AVGK+ +L + N F D T+ F +V++ TV +WDTAGQE Y + YRGA +L + + + +++++ +W+ EL+++A + IIL+G K DL Sbjct: 19 KVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHI-PRWLEELRNHADKNIVIILIGNKCDL 134
BLAST of CX286794 vs. ExPASy Swiss-Prot
Match: RAB17_HUMAN (Ras-related protein Rab-17 OS=Homo sapiens GN=RAB17 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.910e-13 Identity = 48/129 (37.21%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 70 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGST-VNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPG-VPIILVGTKLDLRDDKQ 447 S R K V +G G+VGK+ L + Y N F + +PTV F VV G+T + L +WDTAGQE Y+ + L +RGA+ +L + + K S+ +++W+ +L + PG V ++LVG K DL +++ Sbjct: 15 SQPRVFKLVLLGSGSVGKSSLALRYVKNDFKS-ILPTVGCAFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLK-AQQWLKDLEEELHPGEVLVMLVGNKTDLSQERE 141 The following BLAST results are available for this feature:
BLAST of CX286794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286794 ID=CX286794; Name=CX286794; organism=Citrus clementina; type=EST; length=551bpback to top |